mRNA_L-elsbetiae_contig18508.5383.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18508.5383.1
Unique NamemRNA_L-elsbetiae_contig18508.5383.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A2L0BTY8_9CUCU (Target of rapamycin (Fragment) n=1 Tax=Scraptia sp. INB205 TaxID=2055533 RepID=A0A2L0BTY8_9CUCU)

HSP 1 Score: 93.2 bits (230), Expect = 9.970e-23
Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+KFPEK+PFRLTRML+NAMEV G+
Sbjct:   91 RHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLINAMEVTGI 144
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BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A8K0JS03_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JS03_9TREE)

HSP 1 Score: 98.6 bits (244), Expect = 1.010e-22
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+D++SGKV+HIDFGDCFEVAMQRDKFPEK+PFRLTRMLVNAMEV G+
Sbjct: 2156 RHPSNLMLDQISGKVIHIDFGDCFEVAMQRDKFPEKIPFRLTRMLVNAMEVSGI 2209
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BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: D7FYJ6_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.880e-22
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV 153
            R  SN+MVDRVSG+VVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV
Sbjct: 1707 RHMSNIMVDRVSGRVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV 1757
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BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A2L0BTG4_9NEOP (Target of rapamycin (Fragment) n=2 Tax=Chrysopinae TaxID=2029106 RepID=A0A2L0BTG4_9NEOP)

HSP 1 Score: 93.6 bits (231), Expect = 2.070e-22
Identity = 42/54 (77.78%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+KFPEK+PFRLTRMLVNAMEV G+
Sbjct:  137 RHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLVNAMEVTGI 190
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A2D4MPT8_9SAUR (PI3K/PI4K catalytic domain-containing protein (Fragment) n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A2D4MPT8_9SAUR)

HSP 1 Score: 92.4 bits (228), Expect = 2.550e-22
Identity = 41/54 (75.93%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+KFPEK+PFRLTRML NAMEV G+
Sbjct:   56 RHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGL 109
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A2L0BTM6_9CUCU (Target of rapamycin (Fragment) n=7 Tax=Coccinellidae TaxID=7080 RepID=A0A2L0BTM6_9CUCU)

HSP 1 Score: 93.2 bits (230), Expect = 2.920e-22
Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV 153
            R  SN+M+DR+SGK++HIDFGDCFEVAM RDKFPEK+PFRLTRMLVNAMEV
Sbjct:  137 RHPSNLMLDRLSGKILHIDFGDCFEVAMTRDKFPEKIPFRLTRMLVNAMEV 187
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A2L0BTI5_NICNE (Target of rapamycin (Fragment) n=2 Tax=Nicrophorus TaxID=57515 RepID=A0A2L0BTI5_NICNE)

HSP 1 Score: 93.2 bits (230), Expect = 2.920e-22
Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+KFPEK+PFRLTRML+NAMEV G+
Sbjct:  137 RHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLINAMEVTGI 190
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A0B7A3M3_9EUPU (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A3M3_9EUPU)

HSP 1 Score: 93.2 bits (230), Expect = 4.530e-22
Identity = 40/54 (74.07%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+K+PEK+PFRLTRML+NAMEV G+
Sbjct:   19 RHPSNLMLDRISGKIIHIDFGDCFEVAMVREKYPEKIPFRLTRMLINAMEVTGI 72
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: UPI000C6DA931 (serine/threonine-protein kinase mTOR-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DA931)

HSP 1 Score: 93.2 bits (230), Expect = 4.710e-22
Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM 162
            R  SN+M+DR+SGK++HIDFGDCFEVAM R+KFPEK+PFRLTRML+NAMEV G+
Sbjct:   69 RHPSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLINAMEVTGI 122
[Close]
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Match: A0A6H5K2T8_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 4.780e-22
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 1 
Query:    1 RSGSNMMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV 153
            R  SN+MVDRV+G+VVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV
Sbjct: 1482 RHMSNIMVDRVTGRVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEV 1532
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18508.5383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2L0BTY8_9CUCU9.970e-2375.93Target of rapamycin (Fragment) n=1 Tax=Scraptia sp... [more]
A0A8K0JS03_9TREE1.010e-2281.48Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
D7FYJ6_ECTSI1.880e-2292.16Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2L0BTG4_9NEOP2.070e-2277.78Target of rapamycin (Fragment) n=2 Tax=Chrysopinae... [more]
A0A2D4MPT8_9SAUR2.550e-2275.93PI3K/PI4K catalytic domain-containing protein (Fra... [more]
A0A2L0BTM6_9CUCU2.920e-2282.35Target of rapamycin (Fragment) n=7 Tax=Coccinellid... [more]
A0A2L0BTI5_NICNE2.920e-2275.93Target of rapamycin (Fragment) n=2 Tax=Nicrophorus... [more]
A0A0B7A3M3_9EUPU4.530e-2274.07Non-specific serine/threonine protein kinase (Frag... [more]
UPI000C6DA9314.710e-2275.93serine/threonine-protein kinase mTOR-like n=1 Tax=... [more]
A0A6H5K2T8_9PHAE4.780e-2290.20Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18508contigL-elsbetiae_contig18508:2260..2421 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.7
Seed ortholog evalue1.2e-17
Seed eggNOG ortholog2880.D7FYJ6
Preferred nameTOR1
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
EC2.7.11.1
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons1
Model size162
Cds size147
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.3419974-UTR-L-elsbetiae_contig18508:2259..22741622815771.3419974-UTR-L-elsbetiae_contig18508:2259..2274Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18508 2260..2274 +
1691683091.7099526-UTR-L-elsbetiae_contig18508:2259..22741691683091.7099526-UTR-L-elsbetiae_contig18508:2259..2274Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig18508 2260..2274 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.3559961-CDS-L-elsbetiae_contig18508:2274..24211622815771.3559961-CDS-L-elsbetiae_contig18508:2274..2421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18508 2275..2421 +
1691683091.7226913-CDS-L-elsbetiae_contig18508:2274..24211691683091.7226913-CDS-L-elsbetiae_contig18508:2274..2421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18508 2275..2421 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18508.5383.1prot_L-elsbetiae_contig18508.5383.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18508 2275..2421 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18508.5383.1

>prot_L-elsbetiae_contig18508.5383.1 ID=prot_L-elsbetiae_contig18508.5383.1|Name=mRNA_L-elsbetiae_contig18508.5383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp
MMVDRVSGKVVHIDFGDCFEVAMQRDKFPEKVPFRLTRMLVNAMEVGGM
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mRNA from alignment at L-elsbetiae_contig18508:2260..2421+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18508.5383.1 ID=mRNA_L-elsbetiae_contig18508.5383.1|Name=mRNA_L-elsbetiae_contig18508.5383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=162bp|location=Sequence derived from alignment at L-elsbetiae_contig18508:2260..2421+ (Laminarionema elsbetiae ELsaHSoW15)
CGATCCGGCAGCAACATGATGGTGGACCGGGTGTCCGGGAAGGTGGTGCA
CATCGACTTCGGCGACTGCTTCGAAGTGGCCATGCAGAGGGACAAGTTTC
CGGAGAAGGTTCCCTTCCGCCTCACCAGGATGCTCGTAAACGCCATGGAG
GTGGGTGGGATG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18508:2260..2421+

>mRNA_L-elsbetiae_contig18508.5383.1 ID=mRNA_L-elsbetiae_contig18508.5383.1|Name=mRNA_L-elsbetiae_contig18508.5383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=294bp|location=Sequence derived from alignment at L-elsbetiae_contig18508:2260..2421+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGGTGGACCGGGTGTCCGGGAAGGTGGTGCACATCGACTTCGGCGA
CTGCTTCGAAGTGGCCATGCAGAGGGACAAGTTTCCGGAGAAGGTTCCCT
TCCGCCTCACCAGGATGCTCGTAAACGCCATGGAGGTGGGTGGGATGATG
ATGGTGGACCGGGTGTCCGGGAAGGTGGTGCACATCGACTTCGGCGACTG
CTTCGAAGTGGCCATGCAGAGGGACAAGTTTCCGGAGAAGGTTCCCTTCC
GCCTCACCAGGATGCTCGTAAACGCCATGGAGGTGGGTGGGATG
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