prot_L-elsbetiae_contig18499.5378.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18499.5378.1
Unique Nameprot_L-elsbetiae_contig18499.5378.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length189
Homology
BLAST of mRNA_L-elsbetiae_contig18499.5378.1 vs. uniprot
Match: D7FQ52_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 3.900e-39
Identity = 102/186 (54.84%), Postives = 110/186 (59.14%), Query Frame = 0
Query:    3 DRVRRRCRLHKLPGMIDVKSPKCEILVCPKQPCCGHLGAKARFCSEHKQNGMVNLKTRAFRCKHREELKPGEQEKGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKNIMCNRACRYAFPNEPAVYCAMHSLEGMVDVLNPQCSMDNCLEIPTXXXXXXXXXXXXXXXGTGMQVM 188
            DRVRRRCRL                       CCGHLGAKARFCSEHKQ GMVNLKTRAFRCKHR E KP                XXXXXXXXXXXXXXXX               + + CNRACR+A+PNE AVYCA+H+LEGMVDVLNPQCSMD+CLEIPT               G GMQV+
Sbjct:  249 DRVRRRCRLXXXXXXXXXXXXXXXXXXXXXXXCCGHLGAKARFCSEHKQEGMVNLKTRAFRCKHRGEPKPX---------------XXXXXXXXXXXXXXXXTRNGKGAPPNKKKSRRAVTCNRACRFAYPNEMAVYCAVHALEGMVDVLNPQCSMDDCLEIPTYGFAGEQPTFCMVHSGPGMQVI 419          
BLAST of mRNA_L-elsbetiae_contig18499.5378.1 vs. uniprot
Match: A0A6H5KYH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH5_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 8.110e-27
Identity = 72/187 (38.50%), Postives = 84/187 (44.92%), Query Frame = 0
Query:    3 DRVRRRCRLHKLPGMIDVKSPKCEILVCPKQPCCGHLGAKARFCSEHKQNGMVNLKTRAFRC----------------------KHREELKP---------GEQEKGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RGKNIMCNRACRYAFPNEPAVYCAMHSLEGMVDVLNPQC 156
            DR+RRRCRLHKL  M+DVKSP+CE+  C KQPCCG  G K RFCSEHKQ+GM+NLK    RC                      + R +  P         G     ++                                        GK   CNRACRYA+P E AVYC  H L GMVDV+NP C
Sbjct:  262 DRIRRRCRLHKLDDMVDVKSPRCEMAGCRKQPCCGFPGLKPRFCSEHKQDGMLNLKVPYRRCLNTTTPPSPVFAIGVGFSSLAWQRRCKTSPPLGVCHRGIGFSSPANDVVKQANSLRELGNQTRAFRCKYRGVAGLGIADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSC 448          
BLAST of mRNA_L-elsbetiae_contig18499.5378.1 vs. uniprot
Match: D7FMP7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP7_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 1.110e-24
Identity = 64/154 (41.56%), Postives = 71/154 (46.10%), Query Frame = 0
Query:    3 DRVRRRCRLHKLPGMIDVKSPKCEILVCPKQPCCGHLGAKARFCSEHKQNGMVNLKTRAFRCKHREELKPGEQEKGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGKNIMCNRACRYAFPNEPAVYCAMHSLEGMVDVLNPQC 156
            DR+RRRCRLHKL  M+                 CG  G K RFCSEHKQ+GM+NLKTRAFRCK+R     G                                             GK   CNRACRYA+P E AVYC  H L GMVDV+NP C
Sbjct:  248 DRIRRRCRLHKLDDMVXXXXXXXXXXXXXXXXXCGFPGLKPRFCSEHKQDGMLNLKTRAFRCKYRGVAGLG----------------------------------IADDPMMPLPAGKTQPCNRACRYAYPGEEAVYCQKHKLNGMVDVINPSC 367          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18499.5378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ52_ECTSI3.900e-3954.84EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ52... [more]
A0A6H5KYH5_9PHAE8.110e-2738.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMP7_ECTSI1.110e-2441.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18499contigL-elsbetiae_contig18499:383..2570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18499.5378.1mRNA_L-elsbetiae_contig18499.5378.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18499 383..2588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18499.5378.1 ID=prot_L-elsbetiae_contig18499.5378.1|Name=mRNA_L-elsbetiae_contig18499.5378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp
MDDRVRRRCRLHKLPGMIDVKSPKCEILVCPKQPCCGHLGAKARFCSEHK
QNGMVNLKTRAFRCKHREELKPGEQEKGDEEEEDEEDEEAEEEKGRRARG
GGKSKKGKKVKKKRKKKRGKNIMCNRACRYAFPNEPAVYCAMHSLEGMVD
VLNPQCSMDNCLEIPTYGFPGEQPTFCMAHSGTGMQVM*
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