mRNA_L-elsbetiae_contig18448.5359.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 317 bits (813), Expect = 1.430e-94 Identity = 154/289 (53.29%), Postives = 202/289 (69.90%), Query Frame = 2 Query: 92 DIRRNHRRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 D R HRR+ ++C+ +VK +L +H+ S DIKG QWAKS+GT R+VI+F AE GLWATTS++QHRED++ + V+D+D++ +AECAAIP+DNCD D + QGEGPH IAAT T GP+VGR++D ++ R LTV DV+ G E + E G RRY+ F LY V R++SDR TCFE+ LR ITPE ++ + Y FIQ+GSTK+FSD KAA+ R W S AG AG P + GDEETY+ ++H+M QEP E+R VRRYPGDWH+L HMAKA+ R Sbjct: 671 DRRSTHRRLLVMCTVVVKAILRGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWMVKSRGSLTVEDVLMGPERDREDGARRYNEFSSELYRGVFAEARNNSDRAAADTCFESELRTAITPEGKSPQQLRYAFIQKGSTKRFSDMKAAIQRIQGIWCGSPAGKAGAPFILGGDEETYKHMYHVMAQEPREYRQVRRYPGDWHLLLHMAKAMLRR 959
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.310e-84 Identity = 146/283 (51.59%), Postives = 185/283 (65.37%), Query Frame = 2 Query: 110 RRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 R++ M+C+ + K VLG ++ AS IK QWAKS+GT R V+DFCA G+WAT S+++HRED+ K V+D ++ ++A C A P DNCD + +Q E PH S IAA+ T G VG LED SKL+R LTV+DVMKG A+GG RR+ F+ L AV ES S + P C EA LRK+ TPE+RA G Y FIQ GSTK F+D+ AA+ R + WR + AG G PC IAGDEETYR L+H+ QE +R RRYPGDWH+L HMAKAL R Sbjct: 328 RQLVMMCTGVAKAVLGTRYRASHHIKAAQWAKSKGTPRVVVDFCAAHGMWATDSQVRHREDFNAKVVEDGHMLPKDATCGAFPFDNCDMKPVVGVSQRE-PHLSTIAASAVTVGGSVGELEDTSKLKRYSLLTVDDVMKGPN--AQGGERRFKAFQSRLRRAVYESASLGSTPDGPRWCVEAQLRKDWTPEERATLDGRYAFIQLGSTKTFTDNNAAIDRILRIWRGTDAGKDGTPCIIAGDEETYRVLYHIQKQERIAYRQFRRYPGDWHLLLHMAKALLKR 607
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE) HSP 1 Score: 266 bits (680), Expect = 1.480e-80 Identity = 137/264 (51.89%), Postives = 177/264 (67.05%), Query Frame = 2 Query: 167 IASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 +AS IK QWAKS+GT R V+DFCA G+WAT +++HRED+ K V+D D + ++A C A P DNCD + +QGE PH S IAA++ T G VG+LED S+L+R LT++DVMKG A+GG RR++ F+ L AV ES S + PL C EA LRK++TPE+RA G Y+FIQ STKKF+D+KAA+ + WR + AG G PC IAGDEETYR L+H+ QE +R RRYPGDWH+ H+AKAL R Sbjct: 1 MASHHIKAAQWAKSKGTPRVVVDFCAAHGMWATDRQVRHREDFNAKVVEDGDKLPKDATCGAFPFDNCDMKPVVGVSQGE-PHLSTIAASVVTVGGSVGKLEDASRLKRYSLLTLDDVMKGPN--AQGGERRFEAFQSQLRRAVYESASLGSTPDGPLWCVEAQLRKDLTPEERATLDGRYVFIQLESTKKFTDNKAAIDCILRIWRGTVAGKDGAPCIIAGDEETYRVLYHIQKQERVAYRQFRRYPGDWHLHLHVAKALLKR 261
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5KFZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ4_9PHAE) HSP 1 Score: 266 bits (679), Expect = 3.610e-79 Identity = 130/283 (45.94%), Postives = 185/283 (65.37%), Query Frame = 2 Query: 110 RRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 RR+ ++C+S+VK VLG +++ S IK TQWAKS+ T R V++F AE AT S++ HRE + + V+D +++ + A+CAA DN D + + QGEGP+ C+A G EVG L D L+R +L+V+D++ G + A G RRY F L+ AV +S R S PL CFEA LR+++TP+ R+ + G Y F+Q+ STK ++D K + R ++ WR ++AG G PC IAGDEETYRF++HLM Q+P +R +RRYPGDWH+L HMAKAL R Sbjct: 374 RRLTVMCTSVVKSVLGSRYMPSHAIKATQWAKSKNTPRPVLNFIAEHLGCATDSQVYHRESKFARVVEDSNLLAKCAKCAAFSQDNVDFEPRVGVRQGEGPYIPCVACVANWVGEEVGTLHDAGTLKRLSELSVDDILVGSD--AAEGERRYGAFLATLFGAVSKSERIRSAEGGPLWCFEAQLREDVTPDARSNSTGKYAFVQRASTKSYTDMKRIIDRILDIWRGTQAGNDGAPCIIAGDEETYRFIYHLMKQDPDNYRQIRRYPGDWHLLLHMAKALLRR 654
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5KK93_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK93_9PHAE) HSP 1 Score: 266 bits (679), Expect = 1.920e-77 Identity = 130/283 (45.94%), Postives = 185/283 (65.37%), Query Frame = 2 Query: 110 RRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 RR+ ++C+S+VK VLG +++ S IK TQWAKS+ T R V++F AE AT S++ HRE + + V+D +++ + A+CAA DN D + + QGEGP+ C+A G EVG L D L+R +L+V+D++ G + A G RRY F L+ AV +S R S PL CFEA LR+++TP+ R+ + G Y F+Q+ STK ++D K + R ++ WR ++AG G PC IAGDEETYRF++HLM Q+P +R +RRYPGDWH+L HMAKAL R Sbjct: 672 RRLTVMCTSVVKSVLGSRYMPSHAIKATQWAKSKNTPRPVLNFIAEHLGCATDSQVYHRESKFARVVEDSNLLAKCAKCAAFSQDNVDFEPRVGVRQGEGPYIPCVACVANWVGEEVGTLHDAGTLKRLSELSVDDILVGSD--AAEGERRYGAFLATLFGAVSKSERIRSAEGGPLWCFEAQLREDVTPDARSNSTGKYAFVQRASTKSYTDMKRIIDRILDIWRGTQAGNDGAPCIIAGDEETYRFIYHLMKQDPDNYRQIRRYPGDWHLLLHMAKALLRR 952
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5JHN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHN2_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.580e-72 Identity = 131/264 (49.62%), Postives = 169/264 (64.02%), Query Frame = 2 Query: 167 IASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 +AS DIKG Q AKS+GT REVI+F AE GLWATTS++QHRED++ + VDD+D+ ++AECAAIP+DNCD D + QGEGPH IAAT T GP+VG ++D S ++ R +TV DVM G E + E G RRY+ F LY +V+ R++S+R+ P TC E+ L K IT E ++ + Y FIQ+GSTK FSD KAA+ R + WR G P E E+R VRRYPGDWH+L HMAKA+ R Sbjct: 1 MASHDIKGAQRAKSKGTCREVINFVAEHGLWATTSKIQHREDFHARFVDDKDLQSQDAECAAIPLDNCDFDPRVVVGQGEGPHLPFIAATALTVGPDVGGMDDCSLVKSRGSITVEDVMMGPEPDREDGARRYNGFLVKLYRSVVAEARNNSERSGPDTCMESELIKAITLEGKSPQQLRYAFIQKGSTKSFSDMKAAIQRILGIWR-------GEP-----------------QPESREYRQVRRYPGDWHLLLHMAKAMLRR 240
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5L577_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L577_9PHAE) HSP 1 Score: 232 bits (592), Expect = 2.530e-65 Identity = 127/276 (46.01%), Postives = 168/276 (60.87%), Query Frame = 2 Query: 92 DIRRNHRRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRD--VRRYPG 913 D R RR++MLC VK + +H+ + DIKG QWAKS+GT R+VIDF A GLWATTS++QHRED++ K V+D+D++ + A+CA I DN D D + E QGEGPH S IAAT T G +VGR++D + LRRRR LTV+ + KG + E G+RR P TC E+ LRK +GST++++D+KAA+ R +E WR + AG G PC IAGDEETYRFL+H+M Q P E+R +RRY G Sbjct: 65 DRRGFARRLYMLCKCAVKAIFLGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAEIASDNSDHDPRVGERQGEGPHISFIAATAVTVGDDVGRMQDAASLRRRRSLTVDQITKG--LDQEQGDRR------------------------PWTCVESELRK------------------RGSTRRYTDNKAAIDRILEMWRYTSAGEEGAPCIIAGDEETYRFLYHIMKQNPEEYRQALLRRYWG 296
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5K3J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J0_9PHAE) HSP 1 Score: 207 bits (528), Expect = 9.590e-59 Identity = 121/264 (45.83%), Postives = 157/264 (59.47%), Query Frame = 2 Query: 167 IASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITPEKRAEAKGGYLFIQQGSTKKFSDSKAAVLRAVEAWRASRAG*AGWPCFIAGDEETYRFLHHLMTQEPGEWRDVRRYPGDWHILFHMAKALCIR 958 +AS IK QWAKS+GT R V+DFCA G+WAT +++HRED+ K V+D D + ++ C A P DNCD + + QGE PH S IAA+ T G VG+LED S+L+R LT++DVMKG A+GG RR++ F+ L A +R R + T AV+ TP GG + +S AAV R + WR + AG G PC IAGDEETYR L+H+ QE +R +RRYPGDWH+L HMAKAL R Sbjct: 1 MASHHIKAVQWAKSKGTPRVVVDFCAAHGMWATDRQVRHREDFNAKVVEDGDKLPKDVTCGAFPYDNCDMEPVVGVCQGE-PHLSTIAASAVTVGGSVGKLEDASRLKRYSLLTLDDVMKGPN--AQGGERRFEAFQSQLTAPTCR-LRERVVRFD--TGRAAVVCGGSTPN--GSNAGG---------ESYSRRPAAVDRILRIWRGTVAGKNGAPCIIAGDEETYRVLYHIQKQERMAYRQLRRYPGDWHLLLHMAKALLKR 247
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5KSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG4_9PHAE) HSP 1 Score: 199 bits (506), Expect = 2.660e-55 Identity = 98/196 (50.00%), Postives = 133/196 (67.86%), Query Frame = 2 Query: 92 DIRRNHRRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRKNITP 679 D R HRR+ ++C+ +V +L +++ S DIKG QWAKS+GT REV +F AE GLWATTS++QHRED++ + V+D+D++ ++AECAAIP+DNCD D + QGEGPH IAAT T GP+VGR++D ++ R LTV DV+ G E + G RRY+ F LY V R++SDR TCFE LRK+ P Sbjct: 409 DRRSTHRRLLVMCTVVVTAILRGRYMGSHDIKGAQWAKSKGTCREVTNFVAEHGLWATTSQIQHREDYHARFVEDKDLLSQDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWLVKGRGSLTVEDVLMGPERDRGDGARRYNEFSADLYRGVFAEARNNSDRAAADTCFECELRKSRPP 604
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE) HSP 1 Score: 200 bits (509), Expect = 4.770e-55 Identity = 101/197 (51.27%), Postives = 137/197 (69.54%), Query Frame = 2 Query: 92 DIRRNHRRVFMLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSRLQHREDWYEKEVDDEDVIDENAECAAIPVDNCDKDISIPETQGEGPHFSCIAATITTRGPEVGRLEDPSKLRRRRDLTVNDVMKGREWEAEGGNRRYDTFEGVLYAAVLESVRSSSDRNNPLTCFEAVLRK-NITP 679 D R RR++MLC VK + +H+ + DIKG QWAKS+GT R+VIDF A GLWATTS++QHRED++ K V+D+D++ + A+CAAI DNCD D + E QG+GPH S IAAT T G +V R++D + LRRRR LTV+ + KG + E G+RR+ FE L A ++SV SSS ++P TC E+ +RK NI+P Sbjct: 520 DRRGFARRLYMLCKCTVKAIFPGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDNDPRVGERQGKGPHISFIAATAVTVGDDVVRMQDAASLRRRRSLTVDQITKG--LDQEEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWTCVESEIRKHNISP 714 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18448.5359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18448.5359.1 >prot_L-elsbetiae_contig18448.5359.1 ID=prot_L-elsbetiae_contig18448.5359.1|Name=mRNA_L-elsbetiae_contig18448.5359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp MLCSSLVKPVLGDKHIASQDIKGTQWAKSRGTSREVIDFCAEMGLWATTSback to top mRNA from alignment at L-elsbetiae_contig18448:340..2155+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18448.5359.1 ID=mRNA_L-elsbetiae_contig18448.5359.1|Name=mRNA_L-elsbetiae_contig18448.5359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1816bp|location=Sequence derived from alignment at L-elsbetiae_contig18448:340..2155+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18448:340..2155+ >mRNA_L-elsbetiae_contig18448.5359.1 ID=mRNA_L-elsbetiae_contig18448.5359.1|Name=mRNA_L-elsbetiae_contig18448.5359.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig18448:340..2155+ (Laminarionema elsbetiae ELsaHSoW15)back to top |