prot_L-elsbetiae_contig18443.5358.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig18443.5358.1
Unique Name	prot_L-elsbetiae_contig18443.5358.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	203

Homology

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.210e-63
Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 0

Query:    1 VVDHRVVGLLSKFLPLSRLSHLDRWKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVS-RDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRKVG 137
            VVDHR+VGLLS+F+PLSRLSHL+RW+ASGL AS+PPVFRTQGVRV++S+ QEC+I+VKTRC SR G+VSLFDI TEIRVS GG+LE+T +VEPLKGV+ RD LSLARVG+LL+LPPGFG VEWFG+GPFECYQDRK G
Sbjct: 1274 VVDHRLVGLLSRFMPLSRLSHLERWRASGLCASNPPVFRTQGVRVDKSTPQECLIRVKTRCASRCGQVSLFDIATEIRVSPGGTLEMTAEVEPLKGVTTRDCLSLARVGILLQLPPGFGRVEWFGKGPFECYQDRKHG 1411

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A3S0BPU6_9BACL (Beta-galactosidase n=1 Tax=Paenibacillus whitsoniae TaxID=2496558 RepID=A0A3S0BPU6_9BACL)

HSP 1 Score: 63.5 bits (153), Expect = 2.930e-8
Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 0

Query:   65 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLS-LARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            RG   LFD++  + V   G LE+T ++ P    + D L  L R G+ L +P GF  + WFGRGP ECY DRK
Sbjct:  825 RGAKPLFDVSVSVVVHASGELELTQELVPRDLGNGDALPPLPRFGVELAMPQGFDRLAWFGRGPHECYVDRK 896

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A231RGP3_9BACL (Beta-galactosidase n=1 Tax=Cohnella sp. CIP 111063 TaxID=1955714 RepID=A0A231RGP3_9BACL)

HSP 1 Score: 63.2 bits (152), Expect = 4.000e-8
Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 0

Query:   25 WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            W  +G    D  V   +G+   R +  E  +KV +   + RG+   F   T   VS GG L +   +EP +G+      L R G  L +P GF  ++WFGRGP ECY DRK
Sbjct:  860 WVKAGF---DRLVADVRGIVFSRPAESELTVKVDSIIGA-RGESVAFRARTIAVVSAGGELRLEARIEPREGLP----PLPRFGFELTMPSGFERMDWFGRGPHECYADRK 962

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A398CN98_9BACL (Beta-galactosidase n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CN98_9BACL)

HSP 1 Score: 60.5 bits (145), Expect = 2.790e-7
Identity = 41/122 (33.61%), Postives = 59/122 (48.36%), Query Frame = 0

Query:   15 PLSRLSHLDR-WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            P+    HL + WK +G    D  V   +   +ER   + C I+V+       G+   F       VS  G +E+   +E LK    D  SL R G+ L++P G+  + WFG+GP ECY DRK
Sbjct:  255 PVDNDVHLAKEWKKAGY---DRLVQLVKSFSLEREETRRCRIRVEL-VLGASGEGIAFRAELSYTVSSEGWVEIEASMESLK----DLPSLPRFGLELRMPAGYDRLSWFGKGPHECYPDRK 368

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A7C1E1G6_9BACE (Beta-galactosidase n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1E1G6_9BACE)

HSP 1 Score: 60.1 bits (144), Expect = 4.550e-7
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0

Query:   71 FDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLS--LARVGMLLKLPPGFGHVEWFGRGPFECYQDRKVGRRRVR 142
            F +     V   G + VTTDV P     + R++  L ++G+ L++P  F HVEWFGRGPFE Y DRK G +  R
Sbjct: 1070 FKVRYHYTVLGDGEISVTTDVLP-----QGRMTHWLPKLGLQLEMPEQFRHVEWFGRGPFETYPDRKTGAKMGR 1138

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI0009BC57FB (DUF4981 domain-containing protein n=2 Tax=Cohnella TaxID=329857 RepID=UPI0009BC57FB)

HSP 1 Score: 59.7 bits (143), Expect = 6.050e-7
Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0

Query:   25 WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            W  +G    D  +   + V V+++   E V+   +   + RG+   F   T   V  GG L +   VEP +G+      L R G  L +P GF  ++WFGRGP ECY DRK
Sbjct:  824 WAKAGY---DRLITNVRNVAVKKTGDSELVVTADSVIGA-RGESVAFRARTTAAVRAGGELLLEALVEPREGLP----PLPRFGFELSMPAGFERLDWFGRGPHECYADRK 926

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A259TKG4_9BACL (Beta-galactosidase n=2 Tax=Paenibacillus sp. XY044 TaxID=2026089 RepID=A0A259TKG4_9BACL)

HSP 1 Score: 59.3 bits (142), Expect = 8.190e-7
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 0

Query:   65 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            RG + LF        + GG+L++T  +EPL    R+   + R+G+ L +P  F +V WFGRGP ECY DRK
Sbjct:  881 RGALPLFRSNLTHLFTSGGALQLTQSIEPL----RELPPMPRLGIRLGIPRRFHNVTWFGRGPHECYPDRK 947

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI00164238B8 (DUF4981 domain-containing protein n=1 Tax=Geobacillus sp. (strain Y412MC10) TaxID=481743 RepID=UPI00164238B8)

HSP 1 Score: 58.5 bits (140), Expect = 1.480e-6
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0

Query:   65 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            +G + +F        +  G+L++T  +EPL    R+   + R+G+ L +P  F HV WFGRGP ECY DRK
Sbjct:  806 KGALPVFRSNLSYLFTSVGALQLTQSIEPL----RELPPMPRLGIRLGIPRRFNHVSWFGRGPHECYPDRK 872

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A5C6AEC9_9BACT (Beta-galactosidase n=1 Tax=Botrimarina colliarenosi TaxID=2528001 RepID=A0A5C6AEC9_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 2.030e-6
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 0

Query:   25 WKASGLSAS--DPPVFRTQGVRVERSSAQECVIKVKTRCKS--RRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            W+ +G+ A   DP       VRV        V++++T  ++  +RG+++   + +E  V   GS+E T  +EP    S +   + R+G++  + PG   VEWFGRGPFE Y DRK
Sbjct:  868 WRNAGIDALRFDPGEVTVARVRVG-------VVRIETTAEAITQRGRIA---VKSEWTVRGDGSIETTHRIEP----SGELPPIPRLGLIAAIAPGMTEVEWFGRGPFENYPDRK 968

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BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI0010C143A6 (DUF4981 domain-containing protein n=1 Tax=Paenibacillus sp. SY21-1 TaxID=2562315 RepID=UPI0010C143A6)

HSP 1 Score: 57.8 bits (138), Expect = 2.740e-6
Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 0

Query:   15 PLSRLSHLDR-WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKS-RRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 135
            PL    HL + W+ +G    D  +   Q +RV+        ++++T   +  RG+   F I T   +   GSL++   +EP +G+      L R G+ L +P  F    WFGRGP ECY DRK
Sbjct:  825 PLDNDVHLAKLWRQAGY---DRFMTSIQSLRVQELGG--LAVRLETEASAGARGESVAFRIRTVYVIHADGSLQIELSLEPREGLP----PLPRFGLELSMPDEFDRFAWFGRGPHECYADRK 938

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L299_9PHAE	1.210e-63	78.26	Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 R...	[more]
A0A3S0BPU6_9BACL	2.930e-8	44.44	Beta-galactosidase n=1 Tax=Paenibacillus whitsonia...	[more]
A0A231RGP3_9BACL	4.000e-8	36.04	Beta-galactosidase n=1 Tax=Cohnella sp. CIP 111063...	[more]
A0A398CN98_9BACL	2.790e-7	33.61	Beta-galactosidase n=1 Tax=Cohnella faecalis TaxID...	[more]
A0A7C1E1G6_9BACE	4.550e-7	43.24	Beta-galactosidase n=1 Tax=Bacteroides sp. TaxID=2...	[more]
UPI0009BC57FB	6.050e-7	34.23	DUF4981 domain-containing protein n=2 Tax=Cohnella...	[more]
A0A259TKG4_9BACL	8.190e-7	42.25	Beta-galactosidase n=2 Tax=Paenibacillus sp. XY044...	[more]
UPI00164238B8	1.480e-6	39.44	DUF4981 domain-containing protein n=1 Tax=Geobacil...	[more]
A0A5C6AEC9_9BACT	2.030e-6	33.91	Beta-galactosidase n=1 Tax=Botrimarina colliarenos...	[more]
UPI0010C143A6	2.740e-6	32.52	DUF4981 domain-containing protein n=1 Tax=Paenibac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004199	Beta galactosidase small chain/ domain 5	PFAM	PF02929	Bgal_small_N	coord: 21..139 e-value: 2.7E-16 score: 60.0
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 12..152 e-value: 9.1E-21 score: 76.3
IPR023933	Glycoside hydrolase, family 2, beta-galactosidase	PANTHER	PTHR46323	FAMILY NOT NAMED	coord: 21..139
None	No IPR available	PANTHER	PTHR46323:SF2	GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN	coord: 21..139
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..167
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 179..202
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 203..203
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 168..178
None	No IPR available	TMHMM	TMhelix		coord: 183..202
None	No IPR available	TMHMM	TMhelix		coord: 146..168
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 21..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig18443	contig	L-elsbetiae_contig18443:802..2963 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig18443.5358.1	mRNA_L-elsbetiae_contig18443.5358.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig18443 802..2963 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig18443.5358.1 ID=prot_L-elsbetiae_contig18443.5358.1|Name=mRNA_L-elsbetiae_contig18443.5358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp
VVDHRVVGLLSKFLPLSRLSHLDRWKASGLSASDPPVFRTQGVRVERSSA
QECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRD
RLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRKVGRRRVRRHHIVVAC
LHSTKCALLLYCMAASGTGPSVWFSSREGSWVVVVTRGALCVACVVCVLR
AFF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004199	B-gal_small/dom_5
IPR014718	GH-type_carb-bd
IPR023933	Glyco_hydro_2_beta_Galsidase
IPR011013	Gal_mutarotase_sf_dom