mRNA_L-elsbetiae_contig18443.5358.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.210e-63 Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 1 Query: 1 VVDHRVVGLLSKFLPLSRLSHLDRWKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVS-RDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRKVG 411 VVDHR+VGLLS+F+PLSRLSHL+RW+ASGL AS+PPVFRTQGVRV++S+ QEC+I+VKTRC SR G+VSLFDI TEIRVS GG+LE+T +VEPLKGV+ RD LSLARVG+LL+LPPGFG VEWFG+GPFECYQDRK G Sbjct: 1274 VVDHRLVGLLSRFMPLSRLSHLERWRASGLCASNPPVFRTQGVRVDKSTPQECLIRVKTRCASRCGQVSLFDIATEIRVSPGGTLEMTAEVEPLKGVTTRDCLSLARVGILLQLPPGFGRVEWFGKGPFECYQDRKHG 1411
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A3S0BPU6_9BACL (Beta-galactosidase n=1 Tax=Paenibacillus whitsoniae TaxID=2496558 RepID=A0A3S0BPU6_9BACL) HSP 1 Score: 63.5 bits (153), Expect = 2.930e-8 Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 1 Query: 193 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLS-LARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 RG LFD++ + V G LE+T ++ P + D L L R G+ L +P GF + WFGRGP ECY DRK Sbjct: 825 RGAKPLFDVSVSVVVHASGELELTQELVPRDLGNGDALPPLPRFGVELAMPQGFDRLAWFGRGPHECYVDRK 896
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A231RGP3_9BACL (Beta-galactosidase n=1 Tax=Cohnella sp. CIP 111063 TaxID=1955714 RepID=A0A231RGP3_9BACL) HSP 1 Score: 63.2 bits (152), Expect = 4.000e-8 Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 1 Query: 73 WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 W +G D V +G+ R + E +KV + + RG+ F T VS GG L + +EP +G+ L R G L +P GF ++WFGRGP ECY DRK Sbjct: 860 WVKAGF---DRLVADVRGIVFSRPAESELTVKVDSIIGA-RGESVAFRARTIAVVSAGGELRLEARIEPREGLP----PLPRFGFELTMPSGFERMDWFGRGPHECYADRK 962
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A398CN98_9BACL (Beta-galactosidase n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CN98_9BACL) HSP 1 Score: 60.5 bits (145), Expect = 2.790e-7 Identity = 41/122 (33.61%), Postives = 59/122 (48.36%), Query Frame = 1 Query: 43 PLSRLSHLDR-WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 P+ HL + WK +G D V + +ER + C I+V+ G+ F VS G +E+ +E LK D SL R G+ L++P G+ + WFG+GP ECY DRK Sbjct: 255 PVDNDVHLAKEWKKAGY---DRLVQLVKSFSLEREETRRCRIRVEL-VLGASGEGIAFRAELSYTVSSEGWVEIEASMESLK----DLPSLPRFGLELRMPAGYDRLSWFGKGPHECYPDRK 368
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A7C1E1G6_9BACE (Beta-galactosidase n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1E1G6_9BACE) HSP 1 Score: 60.1 bits (144), Expect = 4.550e-7 Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 211 FDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLS--LARVGMLLKLPPGFGHVEWFGRGPFECYQDRKVGRRRVR 426 F + V G + VTTDV P + R++ L ++G+ L++P F HVEWFGRGPFE Y DRK G + R Sbjct: 1070 FKVRYHYTVLGDGEISVTTDVLP-----QGRMTHWLPKLGLQLEMPEQFRHVEWFGRGPFETYPDRKTGAKMGR 1138
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI0009BC57FB (DUF4981 domain-containing protein n=2 Tax=Cohnella TaxID=329857 RepID=UPI0009BC57FB) HSP 1 Score: 59.7 bits (143), Expect = 6.050e-7 Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 1 Query: 73 WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKSRRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 W +G D + + V V+++ E V+ + + RG+ F T V GG L + VEP +G+ L R G L +P GF ++WFGRGP ECY DRK Sbjct: 824 WAKAGY---DRLITNVRNVAVKKTGDSELVVTADSVIGA-RGESVAFRARTTAAVRAGGELLLEALVEPREGLP----PLPRFGFELSMPAGFERLDWFGRGPHECYADRK 926
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A259TKG4_9BACL (Beta-galactosidase n=2 Tax=Paenibacillus sp. XY044 TaxID=2026089 RepID=A0A259TKG4_9BACL) HSP 1 Score: 59.3 bits (142), Expect = 8.190e-7 Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 193 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 RG + LF + GG+L++T +EPL R+ + R+G+ L +P F +V WFGRGP ECY DRK Sbjct: 881 RGALPLFRSNLTHLFTSGGALQLTQSIEPL----RELPPMPRLGIRLGIPRRFHNVTWFGRGPHECYPDRK 947
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI00164238B8 (DUF4981 domain-containing protein n=1 Tax=Geobacillus sp. (strain Y412MC10) TaxID=481743 RepID=UPI00164238B8) HSP 1 Score: 58.5 bits (140), Expect = 1.480e-6 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 1 Query: 193 RGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 +G + +F + G+L++T +EPL R+ + R+G+ L +P F HV WFGRGP ECY DRK Sbjct: 806 KGALPVFRSNLSYLFTSVGALQLTQSIEPL----RELPPMPRLGIRLGIPRRFNHVSWFGRGPHECYPDRK 872
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: A0A5C6AEC9_9BACT (Beta-galactosidase n=1 Tax=Botrimarina colliarenosi TaxID=2528001 RepID=A0A5C6AEC9_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 2.030e-6 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 73 WKASGLSAS--DPPVFRTQGVRVERSSAQECVIKVKTRCKS--RRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 W+ +G+ A DP VRV V++++T ++ +RG+++ + +E V GS+E T +EP S + + R+G++ + PG VEWFGRGPFE Y DRK Sbjct: 868 WRNAGIDALRFDPGEVTVARVRVG-------VVRIETTAEAITQRGRIA---VKSEWTVRGDGSIETTHRIEP----SGELPPIPRLGLIAAIAPGMTEVEWFGRGPFENYPDRK 968
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Match: UPI0010C143A6 (DUF4981 domain-containing protein n=1 Tax=Paenibacillus sp. SY21-1 TaxID=2562315 RepID=UPI0010C143A6) HSP 1 Score: 57.8 bits (138), Expect = 2.740e-6 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 43 PLSRLSHLDR-WKASGLSASDPPVFRTQGVRVERSSAQECVIKVKTRCKS-RRGKVSLFDITTEIRVSCGGSLEVTTDVEPLKGVSRDRLSLARVGMLLKLPPGFGHVEWFGRGPFECYQDRK 405 PL HL + W+ +G D + Q +RV+ ++++T + RG+ F I T + GSL++ +EP +G+ L R G+ L +P F WFGRGP ECY DRK Sbjct: 825 PLDNDVHLAKLWRQAGY---DRFMTSIQSLRVQELGG--LAVRLETEASAGARGESVAFRIRTVYVIHADGSLQIELSLEPREGLP----PLPRFGLELSMPDEFDRFAWFGRGPHECYADRK 938 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18443.5358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18443.5358.1 >prot_L-elsbetiae_contig18443.5358.1 ID=prot_L-elsbetiae_contig18443.5358.1|Name=mRNA_L-elsbetiae_contig18443.5358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp VVDHRVVGLLSKFLPLSRLSHLDRWKASGLSASDPPVFRTQGVRVERSSAback to top mRNA from alignment at L-elsbetiae_contig18443:802..2963+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18443.5358.1 ID=mRNA_L-elsbetiae_contig18443.5358.1|Name=mRNA_L-elsbetiae_contig18443.5358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2162bp|location=Sequence derived from alignment at L-elsbetiae_contig18443:802..2963+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18443:802..2963+ >mRNA_L-elsbetiae_contig18443.5358.1 ID=mRNA_L-elsbetiae_contig18443.5358.1|Name=mRNA_L-elsbetiae_contig18443.5358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig18443:802..2963+ (Laminarionema elsbetiae ELsaHSoW15)back to top |