prot_L-elsbetiae_contig1844.5355.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1844.5355.1
Unique Nameprot_L-elsbetiae_contig1844.5355.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length415
Homology
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 1.690e-150
Identity = 219/304 (72.04%), Postives = 251/304 (82.57%), Query Frame = 0
Query:  111 RRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRGLVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQMPAHHVIAPLAGEESGRAESSASGGARDRRRERTPLWDVPEGVVVDPRDVMHKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPEGGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQVDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWVVVDLDNWMKGNTFW 414
            R WSSSGFA      +AAE+P LPSAFPWREAPD   VRGLVERAM+S +QHQHRRFLRAA++L+DADD+ FLRAAEMAFVQVAAG FQMPAH VIAPLA  E    +SS+  G R RRR+  P+WD+PEG +VDPRDVMHKDLADFY+QAAVA K+SR TPFYRLHG   C++SN+NVLWGAQRG+LPE GETIEIWGSKYV +SVLED +A+ R+++  D   LD   LSSIR+TT+QVDVDI CTETFFVSDD T+E++QGSKA  V KHRLRLE SPF KRDFQW VVDLD+WMKGNTFW
Sbjct:   50 RGWSSSGFATPGGDASAAEVPGLPSAFPWREAPDNRGVRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLADGEGDEGKSSSESGDRGRRRDGLPVWDIPEGALVDPRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDKP-LSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESSPFLKRDFQWSVVDLDDWMKGNTFW 352          
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 7.210e-98
Identity = 171/318 (53.77%), Postives = 203/318 (63.84%), Query Frame = 0
Query:  109 TRRRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRGLVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQMPAHHVIAPLAGEESGRAESSASGGARDRRRERT------------PLWDVPEGVVVDPRDVMHKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPEGGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQVDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWVVVDLDNWMKGNTFW 414
            T R WSSSGFA       AAEMP LPSAFPWREA D   +RGLVERAM+S +QHQHRRFLRAA++L+DADD+ FL       V+   G   +P           + G        G    R E+             P+WD+PEG +VDPRDVMHKDLA+FY+QAAVA K+SR TPFYRLHGF  C++SN+NVLWGAQRG+LPE GETIEIWGSKYV +SVLED +A+ R+++  D + LD   LSSIR+TT+QVDVDI CTETFFVSD+ T+E                              VVDLDNWMKGNTFW
Sbjct:   54 TTRGWSSSGFATPGGDAGAAEMPGLPSAFPWREATDNRGMRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLATCRRNGVRPG-GRRGLPDASASGYRTPHQRGGRRRKGVFGIGGPREEKACVYPTLYPGDGLPVWDIPEGALVDPRDVMHKDLAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDKP-LSSIRKTTVQVDVDIGCTETFFVSDNRTEE------------------------------VVDLDNWMKGNTFW 339          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXD5_9PHAE1.690e-15072.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFT8_ECTSI7.210e-9853.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1844contigL-elsbetiae_contig1844:1802..7962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1844.5355.1mRNA_L-elsbetiae_contig1844.5355.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1844 1724..8100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1844.5355.1 ID=prot_L-elsbetiae_contig1844.5355.1|Name=mRNA_L-elsbetiae_contig1844.5355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp
MHVHSVLTPFRESEHTYFLHTQGSDIPTLYPQPPLSNSPAEPPKAQRQSC
ITGDRAMHFLLRTARRRPRPPFASAWGTNKATSIFPAAAPAAPAPAPAAA
TTTRKITSTRRRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRG
LVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQM
PAHHVIAPLAGEESGRAESSASGGARDRRRERTPLWDVPEGVVVDPRDVM
HKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPE
GGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQ
VDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWV
VVDLDNWMKGNTFW*
back to top