mRNA_L-elsbetiae_contig1844.5355.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1844.5355.1
Unique NamemRNA_L-elsbetiae_contig1844.5355.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Match: A0A6H5JXD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXD5_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 2.850e-149
Identity = 219/304 (72.04%), Postives = 251/304 (82.57%), Query Frame = 1
Query:  460 RRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRGLVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQMPAHHVIAPLAGEESGRAESSASGGARDRRRERTPLWDVPEGVVVDPRDVMHKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPEGGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQVDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWVVVDLDNWMKGNTFW 1371
            R WSSSGFA      +AAE+P LPSAFPWREAPD   VRGLVERAM+S +QHQHRRFLRAA++L+DADD+ FLRAAEMAFVQVAAG FQMPAH VIAPLA  E    +SS+  G R RRR+  P+WD+PEG +VDPRDVMHKDLADFY+QAAVA K+SR TPFYRLHG   C++SN+NVLWGAQRG+LPE GETIEIWGSKYV +SVLED +A+ R+++  D   LD   LSSIR+TT+QVDVDI CTETFFVSDD T+E++QGSKA  V KHRLRLE SPF KRDFQW VVDLD+WMKGNTFW
Sbjct:   50 RGWSSSGFATPGGDASAAEVPGLPSAFPWREAPDNRGVRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLRAAEMAFVQVAAGVFQMPAHQVIAPLADGEGDEGKSSSESGDRGRRRDGLPVWDIPEGALVDPRDVMHKDLADFYVQAAVAAKVSRSTPFYRLHGLRSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVSKDRDVLDKP-LSSIRKTTVQVDVDIGCTETFFVSDDRTEEIVQGSKAFAVRKHRLRLESSPFLKRDFQWSVVDLDDWMKGNTFW 352          
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Match: D8LFT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT8_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.320e-96
Identity = 171/318 (53.77%), Postives = 203/318 (63.84%), Query Frame = 1
Query:  454 TRRRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRGLVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQMPAHHVIAPLAGEESGRAESSASGGARDRRRERT------------PLWDVPEGVVVDPRDVMHKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPEGGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQVDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWVVVDLDNWMKGNTFW 1371
            T R WSSSGFA       AAEMP LPSAFPWREA D   +RGLVERAM+S +QHQHRRFLRAA++L+DADD+ FL       V+   G   +P           + G        G    R E+             P+WD+PEG +VDPRDVMHKDLA+FY+QAAVA K+SR TPFYRLHGF  C++SN+NVLWGAQRG+LPE GETIEIWGSKYV +SVLED +A+ R+++  D + LD   LSSIR+TT+QVDVDI CTETFFVSD+ T+E                              VVDLDNWMKGNTFW
Sbjct:   54 TTRGWSSSGFATPGGDAGAAEMPGLPSAFPWREATDNRGMRGLVERAMYSVMQHQHRRFLRAATKLDDADDDAFLATCRRNGVRPG-GRRGLPDASASGYRTPHQRGGRRRKGVFGIGGPREEKACVYPTLYPGDGLPVWDIPEGALVDPRDVMHKDLAEFYVQAAVAAKVSRSTPFYRLHGFTSCEISNVNVLWGAQRGDLPEEGETIEIWGSKYVLKSVLEDIKAISRYRVNKDRAGLDKP-LSSIRKTTVQVDVDIGCTETFFVSDNRTEE------------------------------VVDLDNWMKGNTFW 339          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1844.5355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXD5_9PHAE2.850e-14972.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFT8_ECTSI1.320e-9653.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1844contigL-elsbetiae_contig1844:1724..8100 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-01_000970.1
Exons7
Model size1452
Cds size1245
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.7009373-UTR-L-elsbetiae_contig1844:1723..18011622815768.7009373-UTR-L-elsbetiae_contig1844:1723..1801Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 1724..1801 -
1691683089.9664083-UTR-L-elsbetiae_contig1844:1723..18011691683089.9664083-UTR-L-elsbetiae_contig1844:1723..1801Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 1724..1801 -
1622815768.7811778-UTR-L-elsbetiae_contig1844:7962..80031622815768.7811778-UTR-L-elsbetiae_contig1844:7962..8003Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 7963..8003 -
1691683090.0672889-UTR-L-elsbetiae_contig1844:7962..80031691683090.0672889-UTR-L-elsbetiae_contig1844:7962..8003Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 7963..8003 -
1622815768.7943413-UTR-L-elsbetiae_contig1844:8012..81001622815768.7943413-UTR-L-elsbetiae_contig1844:8012..8100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 8013..8100 -
1691683090.0767012-UTR-L-elsbetiae_contig1844:8012..81001691683090.0767012-UTR-L-elsbetiae_contig1844:8012..8100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 8013..8100 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.7147465-CDS-L-elsbetiae_contig1844:1801..18461622815768.7147465-CDS-L-elsbetiae_contig1844:1801..1846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 1802..1846 -
1691683089.978472-CDS-L-elsbetiae_contig1844:1801..18461691683089.978472-CDS-L-elsbetiae_contig1844:1801..1846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 1802..1846 -
1622815768.72474-CDS-L-elsbetiae_contig1844:2884..29741622815768.72474-CDS-L-elsbetiae_contig1844:2884..2974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 2885..2974 -
1691683089.9952877-CDS-L-elsbetiae_contig1844:2884..29741691683089.9952877-CDS-L-elsbetiae_contig1844:2884..2974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 2885..2974 -
1622815768.7353506-CDS-L-elsbetiae_contig1844:4605..48421622815768.7353506-CDS-L-elsbetiae_contig1844:4605..4842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 4606..4842 -
1691683090.01158-CDS-L-elsbetiae_contig1844:4605..48421691683090.01158-CDS-L-elsbetiae_contig1844:4605..4842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 4606..4842 -
1622815768.7450297-CDS-L-elsbetiae_contig1844:5192..53771622815768.7450297-CDS-L-elsbetiae_contig1844:5192..5377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 5193..5377 -
1691683090.0246615-CDS-L-elsbetiae_contig1844:5192..53771691683090.0246615-CDS-L-elsbetiae_contig1844:5192..5377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 5193..5377 -
1622815768.7547228-CDS-L-elsbetiae_contig1844:6744..68831622815768.7547228-CDS-L-elsbetiae_contig1844:6744..6883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 6745..6883 -
1691683090.0440133-CDS-L-elsbetiae_contig1844:6744..68831691683090.0440133-CDS-L-elsbetiae_contig1844:6744..6883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 6745..6883 -
1622815768.7674172-CDS-L-elsbetiae_contig1844:7413..79621622815768.7674172-CDS-L-elsbetiae_contig1844:7413..7962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 7414..7962 -
1691683090.054338-CDS-L-elsbetiae_contig1844:7413..79621691683090.054338-CDS-L-elsbetiae_contig1844:7413..7962Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 7414..7962 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1844.5355.1prot_L-elsbetiae_contig1844.5355.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1844 1802..7962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1844.5355.1

>prot_L-elsbetiae_contig1844.5355.1 ID=prot_L-elsbetiae_contig1844.5355.1|Name=mRNA_L-elsbetiae_contig1844.5355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp
MHVHSVLTPFRESEHTYFLHTQGSDIPTLYPQPPLSNSPAEPPKAQRQSC
ITGDRAMHFLLRTARRRPRPPFASAWGTNKATSIFPAAAPAAPAPAPAAA
TTTRKITSTRRRWSSSGFAAGDHAGAAAEMPSLPSAFPWREAPDKMNVRG
LVERAMHSYLQHQHRRFLRAASRLNDADDETFLRAAEMAFVQVAAGAFQM
PAHHVIAPLAGEESGRAESSASGGARDRRRERTPLWDVPEGVVVDPRDVM
HKDLADFYMQAAVATKLSRCTPFYRLHGFGECKVSNINVLWGAQRGNLPE
GGETIEIWGSKYVWESVLEDAQALLRHQLLNDSSKLDSHRLSSIRRTTLQ
VDVDIDCTETFFVSDDTTQEVLQGSKAVGVSKHRLRLECSPFFKRDFQWV
VVDLDNWMKGNTFW*
back to top

mRNA from alignment at L-elsbetiae_contig1844:1724..8100-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1844.5355.1 ID=mRNA_L-elsbetiae_contig1844.5355.1|Name=mRNA_L-elsbetiae_contig1844.5355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6377bp|location=Sequence derived from alignment at L-elsbetiae_contig1844:1724..8100- (Laminarionema elsbetiae ELsaHSoW15)
AAGGACAGGAACAGCCAGTCTCGAGACAGGGCCGATGCTACCATATGCTG TCAACAAGACAATGAGCGATACCTATCTAGTGTGCCATGCCAAACAGAGG GGTCATATGATTGTGATCCACCGCGTCGAACGTGTTGCATGCATGTACAT TCCGTATTAACTCCGTTCCGGGAGTCAGAACATACCTACTTTCTGCACAC ACAGGGCAGTGACATCCCAACCTTATACCCACAACCACCCCTTTCAAATT CTCCCGCCGAACCCCCAAAAGCACAAAGACAATCTTGCATCACAGGGGAC AGGGCCATGCACTTCCTCCTGCGTACGGCGCGCCGGCGTCCACGGCCACC CTTTGCCTCGGCTTGGGGGACCAACAAGGCTACCAGTATTTTCCCAGCAG CAGCACCGGCGGCGCCCGCGCCTGCGCCTGCGGCGGCGACGACGACTAGA AAGATCACCAGCACGAGGAGGCGATGGAGCTCCTCGGGCTTCGCGGCCGG CGACCACGCGGGTGCGGCCGCCGAGATGCCAAGCCTTCCGTCCGCATTTC CCTGGCGAGAAGCCCCCGACAAGATGAACGTCCGCGGCCTCGTCGAACGC GCGATGCACTCCTACCTGCAGCACCAGCATCGGAGGTTCTTGCGCGCGGC CAGCAGGCTGAACGATGCCGACGACGAAACGTTTCTGGTGAGTTTGGGTT TTCGAGGCTCGTCCCAGAAGGAGAGGTTGGCGGACGGGTACCGTACGTGT GTGCCAATAAGTAGCCTTCGCAGGTGTTACTAGAAGAAATCACACGAGAT AAAGCGTGGAAACGGCTATCGGGGGGTCGGTTTGGGGTTAGGGTTAGGGT CAGGGTTCCGGAGCCCCTGTCTATTATCTTATCATATCCTATATAGACAG GGATTATTTGTGTGGGAGGCCGCCGACGTGGAGGGTTGCCGCTCGCTGAT CGGCTGCTGCTCGGCGGGAGGCGAGCCGGAGGGGTGAAGCCGCCTCGCCC TCGCATCGCAGAGACAATTGCCTCGCATCGCAGACAACAGCAGTGGGGGT TCGGTTCGGTTCGCTTCCCCTTGACCTCTGATAAATTACCAACCCCCCGC CGTTTCTCTCGGGTCCAAAAATCTGGTCTGGTCTGGTCTTGTCTTGATCG CGTCTTGGTCTTGCCGGCACCCATCTTCTCACACCGGAAAAACATGTTAA TTTTTCCATGGGAGCAGCGTGCGGCAGAGATGGCCTTCGTTCAGGTGGCC GCCGGTGCTTTCCAGATGCCAGCACATCACGTCATAGCACCCCTCGCTGG GGAGGAGAGCGGGCGGGCGGAATCTTCGGCGTCCGGAGGAGCCCGAGATA GAAGAAGTGAGACGTTGGAAGTCTGCGGAAATGCATCGCCCCCCCCCCCG CTCCCCCCCAGCGGTAACTGGTCCTTGGTTGTACTTTGGTTGTAACGGTG CTCTTAGATCGCAGACATTTGAAATGAAAACCTTTTCTACTATTTTTTTA TGCGGGTGTTTTTCTACTCGGCCGGTCCAATCAGTGCTTTTTTAGTCCGG GTTTTGCGATTTTTTTTTATTTCGCTTCTTTTCGGCGTGTTGTCGCCGCT GAGTACCGGGTTGGTGTTGCGAAAATAACGAGATTGTAGCTGCTGTAGTG CCCGAGGGTGCAGAAGTAAGAAGGTTGCGAATCGGTGCTCCGGTCGCGGA GTACGCATGGTTTACACGAATCGCAACTCCGCCGGCACCCGCAATGAAGA ACCACGCGCATTAAAGCCCCCCCCACCAAAAGCCCCCACCCTCTCAGGCA TACGCTGGCACCAGTACGCCAGCCCTAGGAGCCCGCATGCTCCATCCTGG AGAAAATAAATGATAACATAATTAGTGTTGGTGCAGGTTTTAGACCCTGG ATCGTGCTGTGGGTGTCGAATCAGAGCTGCCTTCCGACACACTTTGCTGC GCTCGGCCAGGCCAGCAGCAGCAGGAGACGGCAGTAGCGAGAGTTACTGC TGTGCGCGTGGCGTGAAGGGGTGCTCTGCACACTGGAGAGCCTGCTCTTG CCCATATGTGTAGTCTCCTGGTGGATTAAGAAGCTCTGTTCGCGTAAGAA ATCGTGCTGCGTTCTGCTGCAACCTGTCTCTCAGCTGGCTCTCTCCCTCG GCTCTCCCTCTCTCTTCTCTATCCAAGTTGTGCGATGCCAAGAGTTAGTG CTGTGCGCCAACTACTACCTAAATTGTTCGCCACCTCTCTAGTCACACGT CTCTACTACATTCAAGTTCCAACGTGGCTTGAGGAATTAGTTCCTGGAAG CTCTCCCTGTCGGGGTATACCCAAGTCCTGTGTTTTAGACGTCCCAGAAT GTCCTTCCCTAAAAAAAATCACCGGCGTTTGGTGCCTCCCTAAAATCCTG TGTTTTAGACGTCCCGGATGTCCTTCCCTAAAAGAATTCACAGGCGTTTG ATGCCTCCCTAAAGTCAGAAGTCAAATAACACTGCTGTAACTGTTAATTC ACCACGGAGTCTCGTCTCTAATGTGGGGATGCTATTTCTTTGATTTATTC ATTTATTTTCGAAACAGTGCGCCGCTTCTAAATTTGCTCGGATCCCCGCC CGAGCATTGGTAAATGCATGGGCATCCGTCGTAATAAAAAAACAAAATAG AAATGTGTTGAGCTGAACTAGGTGCCTCTGGATTTAACGACGCTTCTTTC TACCATGGTTTTTGTGCCCACAGGAGAAAGGACGCCGTTGTGGGACGTTC CAGAAGGGGTCGTCGTGGATCCACGAGATGTGATGCACAAGGATCTCGCG GACTTTTACATGCAGGCCGCTGTGGCGACCAAGCTTTCGAGGTGCACGCC GTTCTACCGGCTGCACGGTTTCGGCGAGTGCAAGGTCTCGAACATCAACG TGCTTTGGGTGAGAATGTGTGTCCCGCTGTGTTTCGTGTTCGTGTTTTGG TGTGCTGTGTGGTACTGGTGCCGCAGGCTGTGTGCGTACCGTACCCAAAG CCAGGAGAGAGGTATGTATGTACGACTAGCCGCAACCAGGTTCGCGGACC CTCTTTTCCCCGTTTGACTCGGTGCATATCTGGCTCTCGGAAAACCCTCT CAGAACGGCGTCTTGGTGAAGTCCCGAAGACCCTCGTGGTCAGATATGTT TGCTCCCCAACTACCGTCTGAGACCCCAGCTACCGCCTGAGACGTCATGT ATTTCAAGCTCAGCCTGCTGATGCTCAAAGTTAAATGTGCACGGGGACCG AACAACAGGGTGCTCAGCGCGGTAACCTGCCGGAGGGCGGGGAAACCATC GAGATCTGGGGCTCCAAGTACGTGTGGGAATCGGTTCTTGAAGACGCCCA GGCCCTGCTGAGGCACCAGCTGCTCAATGACAGCAGCAAGCTCGACAGCC ATCGCTTGTCCTCGATCAGGAGGACGACGCTGCAGGTCGACGTGGACATT GACTGCACCGAGACGTTTTTCGTCTCTGACGACACGACGCAAGAGGTGCG TTGTCCGTGTGCGCGTAGATACAGCTGGACTGCTGTCGTGGGCAGGCCGT TCCGTCGTATGTATGTAGACCCCGTGTTGCATTTTTTTGGTGAGCCCCAG CGCGGGTGGGTTTCGTACAAAGGCGCCTCCACCCAGGGTAGCTTCAATTA TTGCCTGCCTCTTTTGGAGTCAGCTTCTGTCGCCGGGCTTGGGGTGACTA CAGAACGCGCCACCACTTGAGAACTTGGGAGTTAACCCCTCTGGGACTAG GCTCCTCGATCCTCCGCAGGTCGAGCAGCCCGAGTCTGTTCATAGTTTGA AAGTCCGCACACAGAAAAAAGGGTATCTTTGTAGAATCTCTGCAGAAAGA GACTTTTCTCTCCGAGGTCCATGCCAATATCTGAACACGCACCGAGGCCA TTTGACGGGCGGGCACTAGGCTGGGGGTGTTGGGTAAAACACTAGAAAGG TTCCTGGGTCTTCAAAACACCACTGCCAGTTCTCTTTGTCGAGTTTTCAC CTTGCTGGATGGTCTCAGGTAGAGGACAACCTGGGAACTATCTAGGTTTT TGACTACTGAAATGATCCATTTCTATGATCAGTTTTTTATAGGTGAAGTC CTCGACCAGGAAACTAGACGTCTCTACTTGAGGGGGCCGCCGGATGGCGT TTCGCCTCATGAAGAAGCGCTCTGTTTGTACGTGCACGATTGTCACATCG TACGTCACGCACAAGATGTGCGTTCTGCCAAAGCCTGACGTCGAGGGTTA TTTTGTAGTGGGAATGCTACAGCTTGTTCAGGCCCAACCGGGAAAGTAGA CGTCTATGCCAGTCCCGCCTAGCGCCCAGCCACTTCGTAATGAATAGCCA ACGGCAGTGGCAGATCGATCTATACCGATTGCTGATGTTGAACGGAAGGC AGACGTATGTCTGGTGATGCATGTGTGTGTTTAGTGATGATGTGTGGATG GGGATGTGGATAGTTATGCTGATGGTGTCGTGGGTGCGCTGCGCATCTGG TGTATGTGATGAGAGAGACCGAACCACAGATTTTCGCAATATATTTTTAT AGCAGACCAAACAACCCAGCAGCAGCGGCGGCGGCGGCAGCAGCAGGCAT TCATTGCTGAGGCGAAACCTATCTAACGCATGCAGCGTGTAGCCTCCTCT GCTTCTGCACAACTGCGTGCGTGGCCATGTCAGGGGGTTCATATTATCAC CCCGATATGCCGACCAGCCCGGGTCCGCAGGAAAAAGGCTTTTCAGTACT CAATTTTTGTGATCAATAAATCACACTTCAAGACCCAGAAGGGTTAAGAA ATCCAACCTAAACACTAAAAAAATATAGACATATAAAAACTTCAGGCGCA CTTGAGATGCCCGGAGAAGAACCTCTAACTTAAACCTTTATAAAGGCGAA ATGGAGGCAACTGGTTTCCCCACAGAGAAAGGAGAAACCGAGCCTCGCTC AAAATGGGAGGTTCTGTACCCCGTTGTCTTGACACCTTGATGTTTTGCCG CTCGACTGTGCGTGTCGTTGTTTCTTTGAGTTTGTTGCTCCCCGTGGTGA GAGAGCGTCATGTGAGAATGAATTCCCATTCAGATGTTGTCTTGACCTAT CGAAAACCCCACTCTTATGTACACAGGTGCTGCAGGGGAGCAAGGCCGTC GGTGTCTCCAAGCATCGACTTCGACTAGAATGCTCTCCGTTTTTCAAGCG CGATTTTCAGTGGGTGGTGAGTTAATCTTGGAGGGGTTCTGCCGGCATTT GCGGCCGACCTACTTTTAGGAGAGGCGTTCAAGAACAGGGATCAGTTCTA CGGCTAACTTTGGTGGACTTGCTGCTAAATATGTACGTTCGACACCATTT TTGGTCGTTCCTGCCTGCATACCGCTCTGTGTGTGTTGTTGGTCGTTCTA CATACTATCTGTTTTGCCACCGGTCTACATACATGTGTTTCATGCATCAG CCGAGGTCGCAGCCGAGGAGATAACCACAAGATTTTTTGGTCGCCTCGCC TTGCTCCTTCGGTGCTTGCCTTCAACTTATCCGAGATAAGTGTTCGGCCA GTCCCTTCTCAGATCTCAAAATGTGCGAGATAAGTGTTTCTCCTTCCTGG GCGTAAATATCCTCTTGCGTCCCATTTATTCGGGCGCCTGCCACACCGTT TCGGTGTGTGTACAGCATGCACGATGCGGTGCTGCTTCTTTGTACAAGCA TGACGTATCCGCCGGCGGGGTCACACAGGAAGGGATAAACACTGGGGCTT TTTTCTTCTTTTTGTTTTTGTTTTTTGCGCCACCTTTCCTCCTGCGGCGC TTGCCTTCATTTTTATCGCGAGAAGGGTACGTCTATCCCTTCCCTCGTCA ACGGCGAAATTGAATTTTGTTTACTCACGAGCTTTTCAGCTTTACTCGCT TTCAACTGCAAATTTGCAAATTTTTCACCCCAGAGGGATTCGGACTCACG GCCTTTGCTACTAGCGGGTTTCGAGGTTACCCACTAGATCACCGGGGCGA CCGGATATGCTCACGAGAATTTATCGTTTTTTTTCACACAGCGAAATGGC GAAACCGTTCACCAACTGCCACCGACGCGACCGGTTGGTTGGTCCCGTTT ATGCCTTCGTTCAGTTCTGAATATACGAACCTGCCTACCCTCGCCTCGCT CTGCCCCCTTGTGTGTGTGTGTGTGTTTTTGTTTCTTGCTACCCCTCCCC TCTGGCCCTTTTTCTTTTGTCTCGGGGCGTATATTGGTTTGTGCTCGCAC GCAGGTGGTCGATTTAGACAACTGGATGAAGGGGAACACCTTCTGGTGAT GAAGGCTGGCCAATAGCGTCGCCCCTGCCTACGAAATGAATGCACTGCTT GCTGTTTGATTCGGTGAAATTTGCGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1844:1724..8100-

>mRNA_L-elsbetiae_contig1844.5355.1 ID=mRNA_L-elsbetiae_contig1844.5355.1|Name=mRNA_L-elsbetiae_contig1844.5355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2490bp|location=Sequence derived from alignment at L-elsbetiae_contig1844:1724..8100- (Laminarionema elsbetiae ELsaHSoW15)
ATGCATGTACATTCCGTATTAACTCCGTTCCGGGAGTCAGAACATACCTA
CTTTCTGCACACACAGGGCAGTGACATCCCAACCTTATACCCACAACCAC
CCCTTTCAAATTCTCCCGCCGAACCCCCAAAAGCACAAAGACAATCTTGC
ATCACAGGGGACAGGGCCATGCACTTCCTCCTGCGTACGGCGCGCCGGCG
TCCACGGCCACCCTTTGCCTCGGCTTGGGGGACCAACAAGGCTACCAGTA
TTTTCCCAGCAGCAGCACCGGCGGCGCCCGCGCCTGCGCCTGCGGCGGCG
ACGACGACTAGAAAGATCACCAGCACGAGGAGGCGATGGAGCTCCTCGGG
CTTCGCGGCCGGCGACCACGCGGGTGCGGCCGCCGAGATGCCAAGCCTTC
CGTCCGCATTTCCCTGGCGAGAAGCCCCCGACAAGATGAACGTCCGCGGC
CTCGTCGAACGCGCGATGCACTCCTACCTGCAGCACCAGCATCGGAGGTT
CTTGCGCGCGGCCAGCAGGCTGAACGATGCCGACGACGAAACGTTTCTGA
TGCATGTACATTCCGTATTAACTCCGTTCCGGGAGTCAGAACATACCTAC
TTTCTGCACACACAGGGCAGTGACATCCCAACCTTATACCCACAACCACC
CCTTTCAAATTCTCCCGCCGAACCCCCAAAAGCACAAAGACAATCTTGCA
TCACAGGGGACAGGGCCATGCACTTCCTCCTGCGTACGGCGCGCCGGCGT
CCACGGCCACCCTTTGCCTCGGCTTGGGGGACCAACAAGGCTACCAGTAT
TTTCCCAGCAGCAGCACCGGCGGCGCCCGCGCCTGCGCCTGCGGCGGCGA
CGACGACTAGAAAGATCACCAGCACGAGGAGGCGATGGAGCTCCTCGGGC
TTCGCGGCCGGCGACCACGCGGGTGCGGCCGCCGAGATGCCAAGCCTTCC
GTCCGCATTTCCCTGGCGAGAAGCCCCCGACAAGATGAACGTCCGCGGCC
TCGTCGAACGCGCGATGCACTCCTACCTGCAGCACCAGCATCGGAGGTTC
TTGCGCGCGGCCAGCAGGCTGAACGATGCCGACGACGAAACGTTTCTGCG
TGCGGCAGAGATGGCCTTCGTTCAGGTGGCCGCCGGTGCTTTCCAGATGC
CAGCACATCACGTCATAGCACCCCTCGCTGGGGAGGAGAGCGGGCGGGCG
GAATCTTCGGCGTCCGGAGGAGCCCGAGATAGAAGAACGTGCGGCAGAGA
TGGCCTTCGTTCAGGTGGCCGCCGGTGCTTTCCAGATGCCAGCACATCAC
GTCATAGCACCCCTCGCTGGGGAGGAGAGCGGGCGGGCGGAATCTTCGGC
GTCCGGAGGAGCCCGAGATAGAAGAAGAGAAAGGACGCCGTTGTGGGACG
TTCCAGAAGGGGTCGTCGTGGATCCACGAGATGTGATGCACAAGGATCTC
GCGGACTTTTACATGCAGGCCGCTGTGGCGACCAAGCTTTCGAGGTGCAC
GCCGTTCTACCGGCTGCACGGTTTCGGCGAGTGCAAGGTCTCGAACATCA
ACGTGCTTTGGGAGAAAGGACGCCGTTGTGGGACGTTCCAGAAGGGGTCG
TCGTGGATCCACGAGATGTGATGCACAAGGATCTCGCGGACTTTTACATG
CAGGCCGCTGTGGCGACCAAGCTTTCGAGGTGCACGCCGTTCTACCGGCT
GCACGGTTTCGGCGAGTGCAAGGTCTCGAACATCAACGTGCTTTGGGGTG
CTCAGCGCGGTAACCTGCCGGAGGGCGGGGAAACCATCGAGATCTGGGGC
TCCAAGTACGTGTGGGAATCGGTTCTTGAAGACGCCCAGGCCCTGCTGAG
GCACCAGCTGCTCAATGACAGCAGCAAGCTCGACAGCCATCGCTTGTCCT
CGATCAGGAGGACGACGCTGCAGGTCGACGTGGACATTGACTGCACCGAG
ACGTTTTTCGTCTCTGACGACACGACGCAAGAGGGTGCTCAGCGCGGTAA
CCTGCCGGAGGGCGGGGAAACCATCGAGATCTGGGGCTCCAAGTACGTGT
GGGAATCGGTTCTTGAAGACGCCCAGGCCCTGCTGAGGCACCAGCTGCTC
AATGACAGCAGCAAGCTCGACAGCCATCGCTTGTCCTCGATCAGGAGGAC
GACGCTGCAGGTCGACGTGGACATTGACTGCACCGAGACGTTTTTCGTCT
CTGACGACACGACGCAAGAGGTGCTGCAGGGGAGCAAGGCCGTCGGTGTC
TCCAAGCATCGACTTCGACTAGAATGCTCTCCGTTTTTCAAGCGCGATTT
TCAGTGGGTGGTGCTGCAGGGGAGCAAGGCCGTCGGTGTCTCCAAGCATC
GACTTCGACTAGAATGCTCTCCGTTTTTCAAGCGCGATTTTCAGTGGGTG
GTGGTCGATTTAGACAACTGGATGAAGGGGAACACCTTCTGGTGAGTGGT
CGATTTAGACAACTGGATGAAGGGGAACACCTTCTGGTGA
back to top