mRNA_L-elsbetiae_contig1843.5350.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1843.5350.1
Unique NamemRNA_L-elsbetiae_contig1843.5350.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: D7FKH4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH4_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 2.260e-124
Identity = 179/229 (78.17%), Postives = 204/229 (89.08%), Query Frame = 1
Query:   70 MNRFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFDSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLMIA 756
            MNRFVFLGAPGVGKGSF SIL PQLGLAT+GAGDLVR+EVKRGTAVGK++KAFSD GQLAPD V+N+L    RR  E+ DAS+GFILDGFPRNLAQAAWLESAGI++DRVINITLPEWI VKK+SARRSCPECR+SFN+ADVNK DGYVMP ILPDF+ C RG+RCPG L+ LERR DDTED+IR+RL VYRS TAPLIDFY+T+GLL+ F V+RGI+DKD+L D+M A
Sbjct:    1 MNRFVFLGAPGVGKGSFASILGPQLGLATIGAGDLVREEVKRGTAVGKEIKAFSDKGQLAPDEVVNNLV---RRRVEQADASQGFILDGFPRNLAQAAWLESAGIKIDRVINITLPEWITVKKISARRSCPECRRSFNIADVNK-DGYVMPMILPDFEGCDRGSRCPGSLENLERREDDTEDIIRDRLLVYRSATAPLIDFYKTKGLLREFAVKRGIKDKDSLVDVMHA 225          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: W4FYD8_9STRA (ADK_lid domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYD8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.260e-62
Identity = 110/240 (45.83%), Postives = 154/240 (64.17%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFDSCGRGARCPGVLDK-----LERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLMIA*FSRLESK 780
            R +FLG PGVGKG++ S +AP+L + T+  GDLVR E+KR +A+GK++K FS +G+L PD +I  +    R   +  DA RG+ILDGFPRN +QA   +     LD V+N  LPEW++++K+S RR C  C   +NVA++N+ + YVMP +LP  D         GV DK     L +R DD  DV+R RL VY +ET PLI +YE +G+LKNF V +G+ D D L  L+++    +ESK
Sbjct:   10 RMMFLGPPGVGKGTYASRIAPKLDIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDDIILTMI---RARLQEHDAKRGYILDGFPRNASQAIEFDKIDT-LDLVVNFDLPEWVLLEKISGRRMCASCGTGYNVANINRGE-YVMPPLLPKVD---------GVCDKCGSAQLVQRPDDAVDVVRHRLQVYANETEPLIAYYEAKGVLKNFHVTKGLADLDRLMQLLLSGVDSIESK 235          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: A0A485KF55_9STRA (Aste57867_5851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KF55_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.290e-62
Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDF----DSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            R +FLG PGVGKG++ + LAP+L + T+  GDLVR E+KR +A+GK++K FS SG+L PD +I  +    R     PDA RG+ILDGFPRN++QA   +     LD V+N  LPEW++++KLS RR C  C   FNVAD+N+ + YVMP +LP      D CG          +L +RADD  DV+R RL VY  ETAPLID+Y+ +G+L NF V +G+ D   L  ++
Sbjct:   10 RMMFLGPPGVGKGTYATRLAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSASGKLVPDEIILTMV---RNRLNEPDAQRGYILDGFPRNVSQAVEFDKIAT-LDLVVNFDLPEWVLLEKLSGRRMCSGCGTGFNVADINRGE-YVMPPLLPKVNGICDKCGS--------TQLIQRADDAVDVVRHRLKVYDDETAPLIDYYDKKGVLTNFHVTKGLADLPRLEKVL 225          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: A0A6G0XA60_9STRA (ADK_lid domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA60_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.400e-62
Identity = 109/232 (46.98%), Postives = 153/232 (65.95%), Query Frame = 1
Query:   46 SGVKNPLHMN-RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFDSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDAL 738
            S +K  +H + R +FLG PGVGKG++ + +AP+L + T+  GDLVR E+KR +A+GK++K FS +G+L PD +I  +    R   +  DA RG+ILDGFPRN++QA   +     LD V+N  LPEW++++K+S RR C  C   FNVA++N+ + YVMP +LP  D  G   +C G    L +R DD  DV+R RL VY  ETAPLI +YE +G+LKNF V +G+ D D L
Sbjct:   13 SKMKKAIHEHARMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDEIILTMV---RARLQEQDAQRGYILDGFPRNVSQAIEFDKIDT-LDLVVNFELPEWVLLEKISGRRMCSSCGTGFNVANINQGE-YVMPPLLPKVD--GVCDKCGGT--HLIQRPDDAVDVVRHRLKVYDDETAPLISYYEEKGVLKNFHVTKGLADLDRL 235          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: A0A024U7C2_9STRA (ADK_lid domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7C2_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.540e-60
Identity = 104/225 (46.22%), Postives = 148/225 (65.78%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFDSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            R +FLG PGVGKG++ + +AP+L + T+  GDLVR E+KR +A+G+++K FS +G+L PD +I  +    R   + PDA RG+ILDGFPRN +QA   +     LD V+N  LPEW++++K+S RR C  C   FNVA++N  + YVMP +LP  D  G   +C G   +L +R DD  DV+R RL VY  ET PLI +YE +G+L+NF V +G+ D D L  ++
Sbjct:   10 RMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKRDSALGRQIKEFSATGKLVPDEIILTMV---RARLQEPDAKRGYILDGFPRNASQAVEFDKIDT-LDLVVNFDLPEWVLLEKISGRRMCSSCGTGFNVANINSGE-YVMPPLLPKVD--GVCDKCGGA--QLVQRPDDAVDVVRHRLQVYADETEPLIAYYEAKGVLQNFHVTKGLADLDRLMHVL 225          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: A0A2D4BSY0_PYTIN (ADK_lid domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSY0_PYTIN)

HSP 1 Score: 202 bits (515), Expect = 4.300e-60
Identity = 106/225 (47.11%), Postives = 143/225 (63.56%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFDSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            + +FLGAPG GKG++ S +AP L + T+  GDLVR E+K  T +G+K+K ++D G L PD +I D+ ++  +     DA  GFILDGFPR L QA       +E D V+NI LP+WI+V+K+S RR C  C   +NVA +N  + Y MP +LP  +    G  C GV   L +R DD EDV+R+RL VY  ETAPLIDFY  +G L+ F V+RG+ D D L  L+
Sbjct:   31 KIMFLGAPGAGKGTYASRIAPLLQIPTISTGDLVRHEIKHNTELGRKIKEYNDRGALVPDEIILDMVAQRLKE---DDAKAGFILDGFPRTLTQAEEFAKV-VEFDLVVNIDLPQWILVEKISGRRVCKSCGTGYNVAYINHGE-YNMPPLLPKVEGVCDG--CGGVT--LVQRPDDNEDVVRKRLEVYNDETAPLIDFYADKGSLRTFEVKRGLADLDKLVHLI 246          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: D0MZA6_PHYIT (Adenylate kinase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZA6_PHYIT)

HSP 1 Score: 201 bits (512), Expect = 4.950e-60
Identity = 107/229 (46.72%), Postives = 149/229 (65.07%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDF----DSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            + +FLGAPG GKG++ S +AP L + T+  GDLVR E+K  T +G K+KA+++SG L PD +I D+  ETR    + DA RGFILDGFPRN+ QA   +    +LD VINI LP+WI+  K+S RR C +C   +NVA +N+ + Y MP +LP+     DSCG  +        L +R DD+ D +++RL+VY  ETAPL+DFY   G LK F V++G+ D D L +L+
Sbjct:    7 KIMFLGAPGAGKGTYASRIAPMLQIPTISTGDLVRHEIKTNTPLGDKIKAYNNSGALVPDQIILDMM-ETRL--AQDDAKRGFILDGFPRNVPQAEAFQQV-TKLDLVINIDLPQWILSDKISGRRVCTKCGSGYNVAFINQGE-YYMPPLLPNVEGICDSCGSAS--------LVQRRDDSPDTVKQRLAVYNQETAPLVDFYTKLGNLKTFEVKKGLADLDKLVELI 222          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: H3G6G8_PHYRM (ADK_lid domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3G6G8_PHYRM)

HSP 1 Score: 201 bits (510), Expect = 6.560e-60
Identity = 105/227 (46.26%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   82 VFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDF----DSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            +FLGAPG GKG++ S +AP L + T+  GDLVR E+K GTA+G K+K +++SG L PD +I D+  +        DA RGFILDGFPRN+ QA   +    +LD V+NI LP+WI+  K+S RR C +C   +NVA +NK + Y MP +LP      DSCG  +        L +R DD+ + +++RL VY  ETAPLIDFY   G L+ F V++G+ D D L DL+
Sbjct:    1 MFLGAPGAGKGTYASRIAPMLQIPTISTGDLVRHEIKTGTALGAKIKEYNNSGALVPDQIILDMMEQRLA---LDDAQRGFILDGFPRNVPQAEAFQEV-TKLDLVVNIDLPQWILTDKISGRRVCTKCGDGYNVAFINKGE-YYMPPLLPKVEGVCDSCGSAS--------LVQRPDDSPETVKQRLEVYNQETAPLIDFYTNLGNLRTFDVKKGLADLDKLVDLI 214          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: T0RG68_SAPDV (ADK_lid domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RG68_SAPDV)

HSP 1 Score: 199 bits (506), Expect = 4.060e-59
Identity = 100/221 (45.25%), Postives = 145/221 (65.61%), Query Frame = 1
Query:   76 RFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDF----DSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRD 726
            R +FLG PGVGKG++ + +AP+L + T+  GDLVR E+KR +A+GK++K +S  G+L PD +I  +    R+  +  DA +G+ILDGFPRN++QA   +     LD V+N  LPEW++++KLS RR C  C   +NVAD+N  + YVMP +LP      D CG         +K+ +RADDT DV++ RL VY  ET PLI +Y  +G+LK+F V++G+ D
Sbjct:    6 RMMFLGPPGVGKGTYATRIAPKLSIPTISTGDLVRAEIKRDSALGKQIKDYSSQGKLVPDEIILTMV---RQRLQEKDAQKGYILDGFPRNVSQAIEFDKIAT-LDSVVNFELPEWVLIEKLSGRRVCDSCGTGYNVADINSGE-YVMPPLLPKAECTCDKCGS--------NKIVQRADDTLDVVKHRLQVYTDETEPLIQYYTDKGILKSFHVKKGLAD 213          
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Match: A0A8K1FH78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH78_PYTOL)

HSP 1 Score: 199 bits (505), Expect = 1.490e-58
Identity = 105/235 (44.68%), Postives = 147/235 (62.55%), Query Frame = 1
Query:   58 NPLHMNRFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKLKAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWLESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVMPKILPDFD----SCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLIDFYETQGLLKNFPVRRGIRDKDALADLM 750
            NP    + +FLGAPG GKG++ + +AP L + T+  GDLVR E+K  T +G+++KA++D G L PD +I D+  +  +     DA RGFILDGFPR + QA       ++LD V+NI LP+WI++ K+S RR C  C   +NVA +++ + Y MP +LP  D    SCG           L +R DD E+V+R+RL VY  ETAPLIDFY  +G L+ F V+RG+ D D L DL+
Sbjct:   32 NPEPSLKIMFLGAPGAGKGTYATRIAPVLQIPTISTGDLVRYEIKHNTPLGEQIKAYNDRGALVPDSIILDMVEKRLQD---DDAKRGFILDGFPRTVNQAEEFAKI-VDLDLVVNIDLPQWILMDKISGRRVCKTCGTGYNVAFIDQGE-YNMPPLLPKVDGVCDSCGNAT--------LVQRHDDKEEVVRKRLDVYNDETAPLIDFYAAKGSLRTFEVKRGLADLDKLMDLI 253          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1843.5350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH4_ECTSI2.260e-12478.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W4FYD8_9STRA1.260e-6245.83ADK_lid domain-containing protein n=3 Tax=Aphanomy... [more]
A0A485KF55_9STRA2.290e-6247.60Aste57867_5851 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XA60_9STRA9.400e-6246.98ADK_lid domain-containing protein n=1 Tax=Aphanomy... [more]
A0A024U7C2_9STRA1.540e-6046.22ADK_lid domain-containing protein n=2 Tax=Aphanomy... [more]
A0A2D4BSY0_PYTIN4.300e-6047.11ADK_lid domain-containing protein n=1 Tax=Pythium ... [more]
D0MZA6_PHYIT4.950e-6046.72Adenylate kinase n=3 Tax=Phytophthora infestans Ta... [more]
H3G6G8_PHYRM6.560e-6046.26ADK_lid domain-containing protein n=16 Tax=Phytoph... [more]
T0RG68_SAPDV4.060e-5945.25ADK_lid domain-containing protein n=1 Tax=Saproleg... [more]
A0A8K1FH78_PYTOL1.490e-5844.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1843contigL-elsbetiae_contig1843:6862..11290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.2
Seed ortholog evalue2.3e-98
Seed eggNOG ortholog2880.D7FKH4
KEGG rclassRC00002,RC00078
KEGG koko:K00858,ko:K00939,ko:K00944
KEGG ReactionR00104,R00127,R00157,R00333,R01547,R11319
KEGG Pathwayko00230,ko00730,ko00760,ko01100,ko01110,ko01130,map00230,map00730,map00760,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.1.23,2.7.4.10,2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons9
Model size1040
Cds size690
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.2737904-UTR-L-elsbetiae_contig1843:6861..71421622815768.2737904-UTR-L-elsbetiae_contig1843:6861..7142Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1843 6862..7142 -
1691683089.6508603-UTR-L-elsbetiae_contig1843:6861..71421691683089.6508603-UTR-L-elsbetiae_contig1843:6861..7142Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1843 6862..7142 -
1622815768.3981583-UTR-L-elsbetiae_contig1843:11221..112901622815768.3981583-UTR-L-elsbetiae_contig1843:11221..11290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1843 11222..11290 -
1691683089.759008-UTR-L-elsbetiae_contig1843:11221..112901691683089.759008-UTR-L-elsbetiae_contig1843:11221..11290Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1843 11222..11290 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.2845461-CDS-L-elsbetiae_contig1843:7142..72161622815768.2845461-CDS-L-elsbetiae_contig1843:7142..7216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 7143..7216 -
1691683089.6637242-CDS-L-elsbetiae_contig1843:7142..72161691683089.6637242-CDS-L-elsbetiae_contig1843:7142..7216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 7143..7216 -
1622815768.2963295-CDS-L-elsbetiae_contig1843:7868..79241622815768.2963295-CDS-L-elsbetiae_contig1843:7868..7924Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 7869..7924 -
1691683089.6731575-CDS-L-elsbetiae_contig1843:7868..79241691683089.6731575-CDS-L-elsbetiae_contig1843:7868..7924Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 7869..7924 -
1622815768.3086102-CDS-L-elsbetiae_contig1843:8310..84371622815768.3086102-CDS-L-elsbetiae_contig1843:8310..8437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 8311..8437 -
1691683089.6828327-CDS-L-elsbetiae_contig1843:8310..84371691683089.6828327-CDS-L-elsbetiae_contig1843:8310..8437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 8311..8437 -
1622815768.3205245-CDS-L-elsbetiae_contig1843:8915..90421622815768.3205245-CDS-L-elsbetiae_contig1843:8915..9042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 8916..9042 -
1691683089.6926157-CDS-L-elsbetiae_contig1843:8915..90421691683089.6926157-CDS-L-elsbetiae_contig1843:8915..9042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 8916..9042 -
1622815768.3361018-CDS-L-elsbetiae_contig1843:9409..94541622815768.3361018-CDS-L-elsbetiae_contig1843:9409..9454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 9410..9454 -
1691683089.7043796-CDS-L-elsbetiae_contig1843:9409..94541691683089.7043796-CDS-L-elsbetiae_contig1843:9409..9454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 9410..9454 -
1622815768.3514204-CDS-L-elsbetiae_contig1843:10302..103341622815768.3514204-CDS-L-elsbetiae_contig1843:10302..10334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10303..10334 -
1691683089.7153347-CDS-L-elsbetiae_contig1843:10302..103341691683089.7153347-CDS-L-elsbetiae_contig1843:10302..10334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10303..10334 -
1622815768.3640409-CDS-L-elsbetiae_contig1843:10672..107481622815768.3640409-CDS-L-elsbetiae_contig1843:10672..10748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10673..10748 -
1691683089.7252703-CDS-L-elsbetiae_contig1843:10672..107481691683089.7252703-CDS-L-elsbetiae_contig1843:10672..10748Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10673..10748 -
1622815768.3743348-CDS-L-elsbetiae_contig1843:10942..110201622815768.3743348-CDS-L-elsbetiae_contig1843:10942..11020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10943..11020 -
1691683089.7333462-CDS-L-elsbetiae_contig1843:10942..110201691683089.7333462-CDS-L-elsbetiae_contig1843:10942..11020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 10943..11020 -
1622815768.385776-CDS-L-elsbetiae_contig1843:11146..112211622815768.385776-CDS-L-elsbetiae_contig1843:11146..11221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 11147..11221 -
1691683089.7479177-CDS-L-elsbetiae_contig1843:11146..112211691683089.7479177-CDS-L-elsbetiae_contig1843:11146..11221Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1843 11147..11221 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1843.5350.1prot_L-elsbetiae_contig1843.5350.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1843 7143..11221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1843.5350.1

>prot_L-elsbetiae_contig1843.5350.1 ID=prot_L-elsbetiae_contig1843.5350.1|Name=mRNA_L-elsbetiae_contig1843.5350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
MNRFVFLGAPGVGKGSFTSILAPQLGLATVGAGDLVRDEVKRGTAVGKKL
KAFSDSGQLAPDGVINDLASETRRHGERPDASRGFILDGFPRNLAQAAWL
ESAGIELDRVINITLPEWIMVKKLSARRSCPECRKSFNVADVNKADGYVM
PKILPDFDSCGRGARCPGVLDKLERRADDTEDVIRERLSVYRSETAPLID
FYETQGLLKNFPVRRGIRDKDALADLMIA*
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mRNA from alignment at L-elsbetiae_contig1843:6862..11290-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1843.5350.1 ID=mRNA_L-elsbetiae_contig1843.5350.1|Name=mRNA_L-elsbetiae_contig1843.5350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4429bp|location=Sequence derived from alignment at L-elsbetiae_contig1843:6862..11290- (Laminarionema elsbetiae ELsaHSoW15)
GGAAAGGAGGTCGAGTGCGCAGTGCGCAGTGCGCAGTGCTATTCCTCTGG AGTGAAGAACCCGCTCCACATGAACCGGTTTGTGTTTCTCGGAGCCCCAG GGGTTGGCAAGGGCTCGTTCACGTCGATCTTGGCGCCCCAACTGGTGAGA GTACTGATGTGTGTGTGTAGTGTGTGTGTGTGTGAGGATGTATGTGCGCA TGTCGCTGCCAGGTCGCTGCTATCGTCCCGTTGGCTCTCCAACACAACCT GTCTACTCCCAAAATTTTAGGGGCTGGCAACTGTCGGAGCGGGAGACTTG GTGAGAGATGAGGTCAAGCGAGGAACAGCTGTGGGGAAAAAGCTCAAGGT ACGAAACGTGAATTAGGCGATGCCAAATGTATCGACGCCCCATGTGCATA TGTACGTTGTCGCCGAACGATTGGCATACTACTGATTACTAATGCCCAGC CCTACCGACTAATCGGCTTATTGGGTATTGACTCAACCTTTCGCGTGTCC CTGGCACATGTTGGTGGTTTGTTTCGCTGGTGCCCTTGGAAGGCATTTTC GGACAGTGGCCAGCTCGCACCGGATGGTGTCATCAACGACCTGGCAAGTG AAACTCGACGACACGGCGGTGGCGCACTTTTGGGATTGTACATGTTTTTT AGAGATAGGCGTGTAAAAGAGAGAGAGGAGCGTGGAGTGAAAGAGGAGTG AAAGGCTGTTGGCCAACGTTTGGGTGTCATCCATGGGGCTTTTATTTTCC TCGGCAATGTCGCTGCTGTCCGAGAGCACCGCGAGCGACGACAGATGAGA TGGAAAAACTTTGTTGCGTCGCTATTTAGCCCACGCTTCCGCTATTCGTG TTTTTTCTTGGTTCCCTCCCTTTTTTGCAGCGGTAATACTGTAATCCAGT AACAATGGCGGCGTGTGTGTTGGTGTTCCCCCGCCACTAGGTAAAGCGGC GTCTAGAGCGACCGGACGCATCGCGGGGCTTCATTCTGGTGAGAGAGAGT GCAGGCATTGCGTATCGTGTACCCCGTTGAGGGAAAACGTTTCTTCGTGC TCTTAAGTTTGGCGAGAGTATCTGATTCTGATAGTATCGCCTGCTGCGGT TTTGGTTTGTCAGGCTGTTTCGGTGGGTGTTTCCTTCCAGCCAGACCGAG CTGCTGTACCACCGATGCATGCATGGGCACGAGCCGTTCGCTTCTTGTTT TTCTTCTCTGTCGGGGAGAAGAAGCGCGCTACGGGAAGATAATTTCCCAA AATCAATATGCTTTAGTTTATTCTTCGGGCCGAAAAAAATTCCACCCCAC CGCCTGGCTAGTCGTTTGCCGCTATTTACTACCTTAGGATTGTGTGTATT TTAACATCAAACAATACGTGAAGGATTTGATGCGAAGGTCGTTGAGCAGC CGCCGAGATATAGGCGGACGGTGTTACATAGCTGGTTTTGTTTCGGAGCC TGGGAAACCTCAAGACTGGACCTTTGTTGCCTTTTGCCCGAACCGACACA CCGTATGTTGCTTAAGAACGTGCGCGACAAGAAGATGCCGTGGCCTGTTG TCTCTCTTTCCGGCCAATACCTTTTCGGCTGGAATTCTTTGGAGTCACTG GGGAAACAAAAAAATGCTTCTGAGAGAACAGAGAGCCCCCCACTGAGCGC ATCCGACGCTGCCTCTGCTCTGTGGAGACTGCTGTGTACAACAGGAGAGA CTTCTCACGAGTGTCTGCAGCCGTCCTTGCAGGCGATGGCGTTGTTCCTT ATGACCTCCTCTCGAGTGTCAATTTGTGACTCCCCCCCCCCCCCCCCCCC CCCCCCCCCCGACTCCGCTGTTTTCTGCCACGACAGGATGGTTTCCCCCG GAACCTGGCACAGGCGGCGTGGCTTGAGTCGGTGCGTGACGTCATGGCGG CAGTCAAGGATTCGCCGCCTTGGCGCTACGCTTTGGGGGTTGGAGCTTGT CGACGGTTTTCCTTGAGTGACCGCAAAAAGACAGCAGTGTTGCTGCGGCG CGGATCTGGCGATGATACCTCAACTATCGATGCAGTTTGCCGTTGGCGCT CGTTTTTAACTTGGTGCATTCGGCGATGATATGCATGTATCAGAAACGGC TGGCGCTACTTGTATACCCCGTGGAGAAGGCCCAAGCCAGCTTCGAAAGC TGGCTTGTGCGTTCCAATCCCACGACGCGTGCGGATTGTTTGCGGTAGAA CACAGACGAATCTGTCGTTTTTTGCTGCTCCCTCTTGGCGTCTTGCAGGC AGGGATCGAATTAGACAGGGTGATCAACATCACACTTCCCGAGTGGATCA TGGTGAAGAAGCTTTCGGCTCGACGAAGCTGCCCAGAGTGTCGAAAGAGT TTCAACGTCGCTGACGTTAACAAAGGTGGGTGGGTATGTATGTAGGTTAT CGCGCCGCGTTTCGGGGGCTAAATAGCGAGTATCATTTTGGAGTCGCTCG GGGGTTCGGGTGCTATTGCACTCGATGTTGAAATTCGGCTGTTTCGTAGC CATCCCGAGGCGGCAAGGAGGCCGACTTTGTGGCAGCTCCCAAGCTGGGT GGCCTGTCTGAAAGGCTACTTCGCTTTACTCTCCGAACGTTTGTGCGGTC ACCGGGGTATGCACCGGTACCTGCGTATCTTATCGTCGTGCTGTATTTTC CCTTTCAGCTTCCATCCGGGTGTGGTGTTTTCCGTCTCACATGTTCCGTA CGTCCTTGGTCACCATTATTCTTCCTGCCTGTTTGTGGGGCTTTTTTTTC TCCCATGGACTTGCATGGAAGCTTCCGTGGGACTTCCGCCAATAACCAAG TCACGTGAAACGTTGCTGTTTTGCGACGTGGAAACGCACGAACGGCGCGA GAGCAGATGGCTACGTGATGCCGAAAATACTGCCGGACTTCGATAGCTGC GGCAGAGGCGCACGATGTCCGGGAGTGCTGGATAAGCTGGAGAGGCGAGC GGACGACACCGAAGACGTGATCCGAGAGAGGTATCTACATGCAACGCGAG AACGAGCGTCTTCCGTAGATGATGCGCATTTGGTCGAGTTGCCTTGCTAT ACCGAGACACTCACTAGCTGCGGCCTACTGTGTGCTGACAGGAGGGGCGG TGGGGTCTAGGCGATGGGCGCCTGTCTAACCTTCATTGCGGCTAGTGCAC AGACAGACATTTGGTCGCACAAATTCACGGCGAAGACGGAGGCATAACGA GTACCGGCATCCCCACTTTCCTGACAGACAGTCGGCGCGACGGCCGTGTG AAGAGGATTTTGTCCCCCCCCCCTGATGGTCTCGATGCCACTCTCCCCGA TGGTTGCATCGCTCTACCCCCCGCGTCCCACCACCGCACGTGCGCGCGGC TATGTATTGCGCGCAGGCTTTCGGTGTATCGCTCCGAGACCGCGCCGCTC ATCGACTTTTACGAGACCCAAGGTCAGCCGAAACATTCACCCAGATGGTC GTGGTTCTGTCTTGCAGCGTGGGATATTTTGCCGGGCTACATACATACGC GAGATAATAGGTTTGTGTCGCATTTCTTCACATCAGAATCACCGTCCACG TTCTCACAGTAGTAGTGAGCGGTGTGGCAGACGAATGGACAAGGGCGTGA CACATCTTCTTAGATCTCATCTTGAAGAGTCGTAAAATTGTATTTTTTGG TGGAGCTTTTTCCGGTGCATGCTCCATCCACGGTGTTTTTTTCTCATTCA AAGTTCCAACTGTTCTGTTTTGCGTAACGTTTTCTTCTAGGGTAACGAAC CCATTGGGCTTCGTGCGAGGGAAATTAATAAAGCACACATGACGCACGTG TTCTCGGTCAGATCGATGTAATATATAATTGTTTTTTCGACTCAAATGCG GGGTTCAAAAGTCCTCTGCCCACCACGCCTGTGTACGAACATACATGTGT AGGTGCGGGTTCGCCCAGCGGGTGGGGGCGAAATTGAAAAGCTGGATTAA AAAATGAAACCTCACAGGGAGGGAGGTAGGCGGAAGGGGAGCTACGCAGC TGTTTTCGCGCTCTCAGTTGTCGTTCTGTAACCCCCCCCACAACACCCCC CCACACACACACACCTTGCTCCAGGGTTGCTTAAGAACTTCCCGGTGAGA CGCGGAATACGGGACAAGGACGCTCTAGCGGATTTAATGATCGCCTGATT TAGTCGCCTCGAATCGAAAGGCGGCCTGATGGCGGGGCACCGCCTTCGCG GGCAGGATTTTGCTGTAGGTCTTAGGGCGTTTTTAGTGATTGGGTTGGTT ACCCCCCCCCCTCCCCGGCCCCCAAAACCAATCGTCGCCTGTTGAGTAAG TACACTTGTTCACGTCCACGGCTAGACTGCAGACGAGATGAGAGAAGAGA GCATAGATACCTCGCAATGAGGGGTGAGGGGTTGGCCTCGGAAGGCGAGA GGCGAGCACACTCCAATGACAGATCCGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1843:6862..11290-

>mRNA_L-elsbetiae_contig1843.5350.1 ID=mRNA_L-elsbetiae_contig1843.5350.1|Name=mRNA_L-elsbetiae_contig1843.5350.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig1843:6862..11290- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACCGGTTTGTGTTTCTCGGAGCCCCAGGGGTTGGCAAGGGCTCGTT
CACGTCGATCTTGGCGCCCCAACTGATGAACCGGTTTGTGTTTCTCGGAG
CCCCAGGGGTTGGCAAGGGCTCGTTCACGTCGATCTTGGCGCCCCAACTG
GGGCTGGCAACTGTCGGAGCGGGAGACTTGGTGAGAGATGAGGTCAAGCG
AGGAACAGCTGTGGGGAAAAAGCTCAAGGGGCTGGCAACTGTCGGAGCGG
GAGACTTGGTGAGAGATGAGGTCAAGCGAGGAACAGCTGTGGGGAAAAAG
CTCAAGGCATTTTCGGACAGTGGCCAGCTCGCACCGGATGGTGTCATCAA
CGACCTGGCAAGTGAAACTCGACGACACGGCGGCATTTTCGGACAGTGGC
CAGCTCGCACCGGATGGTGTCATCAACGACCTGGCAAGTGAAACTCGACG
ACACGGCGAGCGACCGGACGCATCGCGGGGCTTCATTCTGAGCGACCGGA
CGCATCGCGGGGCTTCATTCTGGATGGTTTCCCCCGGAACCTGGCACAGG
CGGCGTGGCTTGAGTCGGATGGTTTCCCCCGGAACCTGGCACAGGCGGCG
TGGCTTGAGTCGGCAGGGATCGAATTAGACAGGGTGATCAACATCACACT
TCCCGAGTGGATCATGGTGAAGAAGCTTTCGGCTCGACGAAGCTGCCCAG
AGTGTCGAAAGAGTTTCAACGTCGCTGACGTTAACAAAGGCAGGGATCGA
ATTAGACAGGGTGATCAACATCACACTTCCCGAGTGGATCATGGTGAAGA
AGCTTTCGGCTCGACGAAGCTGCCCAGAGTGTCGAAAGAGTTTCAACGTC
GCTGACGTTAACAAAGCAGATGGCTACGTGATGCCGAAAATACTGCCGGA
CTTCGATAGCTGCGGCAGAGGCGCACGATGTCCGGGAGTGCTGGATAAGC
TGGAGAGGCGAGCGGACGACACCGAAGACGTGATCCGAGAGAGCAGATGG
CTACGTGATGCCGAAAATACTGCCGGACTTCGATAGCTGCGGCAGAGGCG
CACGATGTCCGGGAGTGCTGGATAAGCTGGAGAGGCGAGCGGACGACACC
GAAGACGTGATCCGAGAGAGGCTTTCGGTGTATCGCTCCGAGACCGCGCC
GCTCATCGACTTTTACGAGACCCAAGGCTTTCGGTGTATCGCTCCGAGAC
CGCGCCGCTCATCGACTTTTACGAGACCCAAGGGTTGCTTAAGAACTTCC
CGGTGAGACGCGGAATACGGGACAAGGACGCTCTAGCGGATTTAATGATC
GCCTGAGGTTGCTTAAGAACTTCCCGGTGAGACGCGGAATACGGGACAAG
GACGCTCTAGCGGATTTAATGATCGCCTGA
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