prot_L-elsbetiae_contig18411.5346.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18411.5346.1
Unique Nameprot_L-elsbetiae_contig18411.5346.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length143
Homology
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 3.300e-81
Identity = 129/138 (93.48%), Postives = 132/138 (95.65%), Query Frame = 0
Query:    6 QEKRLFPSAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 143
            QEKRLFPSAHLVRVLA ANAGLGVLYLHWRYT TFPP + R DY +WKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDIT+VDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR
Sbjct:  258 QEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 395          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: D7FN39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN39_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 4.220e-60
Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 0
Query:    6 QEKRLFPSAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNAR 104
            QEKRLFPSAHLVRVLA ANAGLGVLYLHWRYT TFPP + R DY +WKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDIT+VDDQVGYNAR
Sbjct:   35 QEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDYMSWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNAR 133          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A836CP13_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP13_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.420e-26
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   12 PSAHLVRVLACANAGLGVLYLHWRYTETFPP------GLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGL 136
            PSA ++R +   N  +   YL WR T T         G+     + W     W F++ E  L IA+W+G  QRLF VQR+++TMDDI   DD VGYN+RV ILLPT GE L+VV KAL+G +S R WD+ +
Sbjct:  343 PSAFVIRAIVVLNICVSCAYLWWRVTRTIFQIDDYFFGIPFLPVQGWA----WAFYAVEICLTIAIWIGHTQRLFAVQRVRLTMDDIVREDDSVGYNSRVAILLPTNGEKLDVVMKALLGVVSLRGWDTSV 469          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: D7FSC4_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 3.070e-25
Identity = 64/134 (47.76%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    3 ITYQEKRLFPSAHLVRVLACANAGLGVLYLHWRY--TETFPPGLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDS 134
            I  Q K  F S+ L+R +   N   G  Y+ WR+  T+  PP     +YK W      +FF  E FL  A+W+G +QRLF VQRI+ TMD I ++D  VG NA V ILLPTAGE L+VV K L+GA SQR W S
Sbjct:   79 INPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQDVPP-----EYK-WXXX---VFFMVEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPS 203          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A835ZCE1_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.290e-23
Identity = 56/127 (44.09%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   13 SAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYKAWKLY----WWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSG 135
            S  L+R++  AN G   LYL+WR T T    +    Y   K +    W W+F+  E  L I + +G  QR+FP++R  V M+D+   DD VGYNARV ILLP+AGE L++V  AL+GA+SQ  W  G
Sbjct:  218 STPLLRLIMAANVGFSALYLYWRATSTITT-IDTYFYNI-KYFPVQIWAWVFYGVEICLTIGILIGHTQRMFPIKRAIVAMEDLVREDDCVGYNARVAILLPSAGERLDIVMLALLGAMSQSTWRGG 342          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A835YVP7_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.810e-19
Identity = 53/130 (40.77%), Postives = 68/130 (52.31%), Query Frame = 0
Query:   13 SAHL-VRVLACANAGLGVLYLHWRYTETFPP------GLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSG 135
            S+HL +R +  AN    VLYL WR T T         G+     +AW     W F++ E  L I +W+G +QRLF V                  YNARVCILLPTAGE L++V  AL+G +SQR+W  G
Sbjct:   18 SSHLLIRCVILANLAFSVLYLWWRVTSTITTINSYFFGIKALPVQAWG----WTFYAVEICLTIGIWIGHSQRLFAVS----------------SYNARVCILLPTAGERLDIVMLALLGCISQRMWACG 127          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A835YSM9_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSM9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.930e-16
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query:   12 PSAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGL 136
            PSA ++R +   N G+ + YL+WR T T    ++  D                +F  I  W+       PV RIK+TMD++   DD VGYN+RV ILLPT GENL+VV KA++G +S R WD+ +
Sbjct:  118 PSAMVIRAIVIINIGVSLAYLYWRVTHT----ITNID---------------SYFFGIT-WL-------PV-RIKMTMDELVREDDSVGYNSRVAILLPTNGENLDVVMKAMLGCISLRGWDASV 214          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A835YIK8_9STRA (Cellulose synthase, family GT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.210e-13
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   56 WWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR 143
            W ++FF AE  L + + V    R FP+ R +VTMD++   D Q G + +V ILLPTAGE L+V+ +AL G L  RLW S      TLR
Sbjct:   27 WGYIFFGAEVLLIVGLLVSHVSRAFPIHRERVTMDELVDSDPQTG-DLKVAILLPTAGEKLQVMLQALFGVLQLRLWSSSRARCDTLR 113          
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Match: A0A835Z7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.630e-11
Identity = 48/159 (30.19%), Postives = 73/159 (45.91%), Query Frame = 0
Query:    1 MLITYQEKRLFPSAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYKAWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDI----TAVDD----------------------QVGYNARVCILLPTAGENLEVVFKALVGALSQRLWD 133
            ML+   +  L P+A L+R +   N  LG  YL WR T++ P         A+     +++   E  L +++W+    RL P  R  + +DD+     A+D                        +   ARV ILLPTAGE L V+ +AL+G  SQ+LW+
Sbjct:  190 MLVAGLQVTLHPTAGLIRAVFACNLVLGARYLLWRCTKSLPLEDGSPAATAYA----YIYLLCEAILVMSIWMSHCTRLLPAVRPIIRVDDLIEASNALDTLQMANAADAGSRAPSEQQPGLISIAEEARVAILLPTAGEGLPVLLRALLGCFSQKLWE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18411.5346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FSC3_ECTSI3.300e-8193.48Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
D7FN39_ECTSI4.220e-6090.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CP13_9STRA1.420e-2645.04Glyco_trans_2-like domain-containing protein n=1 T... [more]
D7FSC4_ECTSI3.070e-2547.76Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
A0A835ZCE1_9STRA1.290e-2344.09Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YVP7_9STRA8.810e-1940.77Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YSM9_9STRA5.930e-1640.00Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835YIK8_9STRA7.210e-1345.45Cellulose synthase, family GT2 n=1 Tax=Tribonema m... [more]
A0A835Z7S9_9STRA1.630e-1130.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18411contigL-elsbetiae_contig18411:560..1704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18411.5346.1mRNA_L-elsbetiae_contig18411.5346.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18411 560..1704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18411.5346.1 ID=prot_L-elsbetiae_contig18411.5346.1|Name=mRNA_L-elsbetiae_contig18411.5346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp
MLITYQEKRLFPSAHLVRVLACANAGLGVLYLHWRYTETFPPGLSRSDYK
AWKLYWWWLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITAVDDQVG
YNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLR
back to top