prot_L-elsbetiae_contig1840.5341.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1840.5341.1
Unique Name	prot_L-elsbetiae_contig1840.5341.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	531

Homology

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BLAST of mRNA_L-elsbetiae_contig1840.5341.1 vs. uniprot
Match: D8LH58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH58_ECTSI)

HSP 1 Score: 832 bits (2150), Expect = 4.540e-301
Identity = 431/530 (81.32%), Postives = 466/530 (87.92%), Query Frame = 0

Query:    1 MRPWNYFALMSSIGFGLQRGFGYAFTSSTFRGPVATGTVARSAIAPSRRRGRSSTAVRMASSFDPIKAAQAVKEAMDGGGKVNPVYRQMVVLAVSSGAAGATRYFKPSGQG---TDRRGLTKAIQAHVGQLMDAVLSPKPDEENAQAIARILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPEIGALAILAVYEALRRFGVFTRFGTVKLPDAELVPTGNIPDPIEDMEDTPIFKAAQFETDARVLSYYTLIGAFLFSTLSYVVSGCDGHMAWTGILMLSFVAFEREVLHSALYSEAIIRIQPMLVHLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPSSLPEQPRLNAHMTYPWEDPARLPNLLALDFSSSEIPNEDRVAPFDTKGRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRITEKWAFLENLHIFQAERTAMELLAKNMRERRSIGRLMLDLDRSLAATEYELTAA 527
            MRPW    L++SIG G QRGFGYAFTSS      +  + ++   A SRR   SST +RMASSF+PI   +AVKEAM G G+VNPVYRQMVVLAV SGAAGA RY  PSG+    T +R L KA+QAHVGQLMDAVLSP PDEENA+AI RILDRCEEQHKGAGATLALGYLDTVWWLPAPIRP IGALAILAVYEALRRFGVFTRFG VKLPD EL PT  +P+P+E MED+PIFKAAQFETDAR LSYYTLIGAFL ST+SYV+SG DG +AW+G+L+L+FVAFEREVLHSALYSEAIIR+QPML  LTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGP+S PE PRL A MTYPWEDPARL NL+ LDFSSSEIP++DRVAPFDT+GRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLR TEKWAFLENL IF+AERTAMELLAKNMRERR IGRLMLDLDRSL +TE+EL+AA
Sbjct:    1 MRPWTALGLIASIGVGFQRGFGYAFTSSKV---TSFPSSSKGTPASSRRHAMSSTQLRMASSFNPI---EAVKEAMGGDGRVNPVYRQMVVLAVKSGAAGAARYLNPSGESSTSTGKRALNKAVQAHVGQLMDAVLSPAPDEENAEAIKRILDRCEEQHKGAGATLALGYLDTVWWLPAPIRPAIGALAILAVYEALRRFGVFTRFGMVKLPDTELAPTETVPEPVEGMEDSPIFKAAQFETDARSLSYYTLIGAFLVSTMSYVISGGDGQVAWSGMLLLTFVAFEREVLHSALYSEAIIRVQPMLTQLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNIINAELSTARIWLPEELLTGPASEPE-PRLEARMTYPWEDPARLQNLVELDFSSSEIPHKDRVAPFDTEGRHAMSNRMALTSMGGIAGEMMANGFDVGGGADYFNMRRRFKGLWPYMSQDDLRRTEKWAFLENLKIFKAERTAMELLAKNMRERRPIGRLMLDLDRSLTSTEFELSAA 523

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1840.5341.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1840.5341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LH58_ECTSI	4.540e-301	81.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33471	FAMILY NOT NAMED	coord: 294..509
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..530
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..17

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1840	contig	L-elsbetiae_contig1840:13456..19203 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1840.5341.1	mRNA_L-elsbetiae_contig1840.5341.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1840 13411..19557 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1840.5341.1 ID=prot_L-elsbetiae_contig1840.5341.1|Name=mRNA_L-elsbetiae_contig1840.5341.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=531bp
MRPWNYFALMSSIGFGLQRGFGYAFTSSTFRGPVATGTVARSAIAPSRRR
GRSSTAVRMASSFDPIKAAQAVKEAMDGGGKVNPVYRQMVVLAVSSGAAG
ATRYFKPSGQGTDRRGLTKAIQAHVGQLMDAVLSPKPDEENAQAIARILD
RCEEQHKGAGATLALGYLDTVWWLPAPIRPEIGALAILAVYEALRRFGVF
TRFGTVKLPDAELVPTGNIPDPIEDMEDTPIFKAAQFETDARVLSYYTLI
GAFLFSTLSYVVSGCDGHMAWTGILMLSFVAFEREVLHSALYSEAIIRIQ
PMLVHLTSAHEAGHVAAAYLTGLPVATYTLGGLGSLQHGDEVGCGPSCNI
INAELSTARIWLPEELLTGPSSLPEQPRLNAHMTYPWEDPARLPNLLALD
FSSSEIPNEDRVAPFDTKGRHAMSNRMALTSMGGIAGEMMANGFDVGGGA
DYFNMRRRFKGLWPYMSQDDLRITEKWAFLENLHIFQAERTAMELLAKNM
RERRSIGRLMLDLDRSLAATEYELTAAIKS*