mRNA_L-elsbetiae_contig18383.5331.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: D7FUU8_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU8_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.120e-52 Identity = 88/107 (82.24%), Postives = 97/107 (90.65%), Query Frame = 1 Query: 127 MPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 MPNVQALAGTPHEPHLRLLETFAYGTY DAQAKA+QLPKLT +Q V+KLRMLSVVSLAH SK+V Y MK ALG+DN+R LED+IFDTMY+GLLQGKLDQR+ VLKV Sbjct: 1 MPNVQALAGTPHEPHLRLLETFAYGTYTDAQAKADQLPKLTGAQ-VDKLRMLSVVSLAHTSKLVPYAAMKTALGIDNIRRLEDVIFDTMYAGLLQGKLDQRQAVLKV 106
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A835YQX8_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX8_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.230e-51 Identity = 88/145 (60.69%), Postives = 114/145 (78.62%), Query Frame = 1 Query: 13 GLVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 GL Q+ +LAK AKG ACVALIQ+V+++KK+FVFGELL MPNVQ L GT HEP+LRLLE FAYG Y D +A LP+L+D+ EKLRML+VV+LA+ S+VV YG ++ ALG+ +VR +ED++ D MY+GLLQ +LDQR L+V Sbjct: 9 GLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAM-TEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRV 152
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A7S2UVG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG8_9STRA) HSP 1 Score: 167 bits (424), Expect = 6.060e-50 Identity = 90/144 (62.50%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 16 LVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 L +F++LAK AKG ACVALIQQVL+N ++FVFGELL PNVQALAGT HE HLRLLE FAYGTY+D LP+LT +Q+ KLR LS+VSLA ASKV+ Y + L ++NVR LEDL+ +T+Y GL+ GKLDQ VLKV Sbjct: 11 LERFVILAKNAKGRACVALIQQVLNNNRVFVFGELLASPNVQALAGTEHELHLRLLELFAYGTYSDYHENRSSLPELTPAQRT-KLRQLSLVSLASASKVLRYEELMKELQLENVRELEDLVIETIYVGLVLGKLDQLGGVLKV 153
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: F0YEG3_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEG3_AURAN) HSP 1 Score: 164 bits (415), Expect = 1.240e-48 Identity = 88/152 (57.89%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 1 MSEEG---LVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 M+E+G L QF +LAK AKG A V +IQQ LS+K+++VFGELL MP+VQAL GT H PHL LLE FA+GTY D +AK + +P LT +Q + KLR LS+VSLA S VVAY TM+ L +DNVR LED I +T+Y+GLL GK+DQ +V Sbjct: 1 MAEDGSQALEQFCLLAKSAKGRAVVGIIQQTLSSKRIYVFGELLAMPSVQALRGTEHAPHLDLLEIFAFGTYGDYRAKGDAMPPLTPAQ-LTKLRQLSLVSLARESAVVAYATMQEELAVDNVRDLEDAIIETIYAGLLSGKMDQMSAEFRV 151
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A7R9UCJ6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ6_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.290e-45 Identity = 82/146 (56.16%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 10 EGLVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 + L QF+ LAK AKGAACVALIQQVL++ K+FVFGELL MPNVQAL GT H+P+LRLLE FAYGT ADAQ E LP ++++Q+ KLR LS++S A + Y + AL +DNVR LED++ D +Y+ L+ KL+QR+ V+++ Sbjct: 21 DALEQFVSLAKTAKGAACVALIQQVLNHPKVFVFGELLLMPNVQALRGTEHQPYLRLLELFAYGTMADAQGAKEALPTMSEAQEA-KLRKLSILSAAQTQGTLDYDQLMPALQVDNVRDLEDVVIDAIYADLIDAKLNQRERVVRI 165
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: V9EG37_PHYPR (PCI domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EG37_PHYPR) HSP 1 Score: 157 bits (398), Expect = 2.580e-45 Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 13 GLVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 GL QF +LAK A+G ACVALIQQVLSNKKLFVF ELL MPNV+AL + H H LL F++GTY D A+ ++LP LT QQ+ KLR L+VVSLAH K + Y T+ LG+ VR +ED++ DT+YSGL+QGKLDQ+ V Sbjct: 10 GLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKDELPDLTP-QQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGVSTVREVEDILIDTIYSGLVQGKLDQKSRCFVV 153
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A3F2RJW9_9STRA (PCI domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJW9_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.730e-45 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 16 LVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 L QF +LAK A+G ACVALIQQVLSNKKLFVF ELL MPNV+AL + + H LL F +GTY++ A E+LP+LT QQV KLR L+ VSLAH K + Y T+ LG+ +VR +ED++ DT+YSGLLQGKLDQ+ V Sbjct: 11 LEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEYSGHYELLRIFCFGTYSEYAAHKEELPELTP-QQVNKLRKLTAVSLAHRYKNIPYNTLMQDLGVSSVREVEDILIDTIYSGLLQGKLDQKSSCFAV 153
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A833WNQ7_PHYIN (PCI domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WNQ7_PHYIN) HSP 1 Score: 154 bits (390), Expect = 4.130e-44 Identity = 82/139 (58.99%), Postives = 103/139 (74.10%), Query Frame = 1 Query: 13 GLVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQR 429 GL QF +LAK A+G ACVALIQQVLSNKKLFVF ELL MPNV+AL + H+ H LL F++GTY D A+ ++LP+LT QQV KLR L+VVSLA K + Y T+ L + VR +ED++ DT+YSGL+QGKLDQ+ Sbjct: 10 GLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALQDSEHKEHYELLRIFSFGTYNDYVARKDELPELTP-QQVNKLRKLTVVSLALRFKNIPYDTLMQDLDVSTVREVEDILIDTIYSGLIQGKLDQK 147
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: A0A7S2RP08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP08_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.720e-44 Identity = 83/142 (58.45%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 22 QFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 +F +LAK +G A VALI+Q LS+KK+FV GELL M N+QAL GT E HLRLLE FAYGTY++ QA +QLP+L +S EKLR LS+VSLAH K V Y ++ L + NVR LEDLI DT+Y+GL+ GKLDQ +L V Sbjct: 29 RFCLLAKSQRGRAVVALIEQALSSKKVFVVGELLAMDNIQALRGTEFEAHLRLLELFAYGTYSEYQAAKDQLPEL-NSNMKEKLRALSIVSLAHTKKQVTYTELQQELAITNVRELEDLIIDTIYAGLVDGKLDQANGMLNV 169
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Match: K3W6U3_GLOUD (PCI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6U3_GLOUD) HSP 1 Score: 153 bits (387), Expect = 1.450e-43 Identity = 81/144 (56.25%), Postives = 103/144 (71.53%), Query Frame = 1 Query: 16 LVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAGTPHEPHLRLLETFAYGTYADAQAKAEQLPKLTDSQQVEKLRMLSVVSLAHASKVVAYGTMKAALGMDNVRHLEDLIFDTMYSGLLQGKLDQRKEVLKV 447 L QF +LAK A+G ACVAL+QQVL+NKKLFVF ELL MPNVQAL T + + LL+ F +G Y D A+ E+LP LT QQV+KLR L+VVSLAH K+V Y + L + VR LED++ +T+YSGL+QGKLDQ+ + V Sbjct: 11 LEQFTLLAKNARGRACVALVQQVLTNKKLFVFRELLDMPNVQALQDTENHGYYELLKIFCFGNYGDYLARKEELPALTP-QQVQKLRKLTVVSLAHRYKLVPYNVLMEGLDVPTVRELEDILIETIYSGLVQGKLDQKSQAFVV 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18383.5331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18383.5331.1 >prot_L-elsbetiae_contig18383.5331.1 ID=prot_L-elsbetiae_contig18383.5331.1|Name=mRNA_L-elsbetiae_contig18383.5331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp MSEEGLVQFLVLAKGAKGAACVALIQQVLSNKKLFVFGELLGMPNVQALAback to top mRNA from alignment at L-elsbetiae_contig18383:256..1878- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18383.5331.1 ID=mRNA_L-elsbetiae_contig18383.5331.1|Name=mRNA_L-elsbetiae_contig18383.5331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1623bp|location=Sequence derived from alignment at L-elsbetiae_contig18383:256..1878- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18383:256..1878- >mRNA_L-elsbetiae_contig18383.5331.1 ID=mRNA_L-elsbetiae_contig18383.5331.1|Name=mRNA_L-elsbetiae_contig18383.5331.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig18383:256..1878- (Laminarionema elsbetiae ELsaHSoW15)back to top |