prot_L-elsbetiae_contig1835.5319.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1835.5319.1
Unique Nameprot_L-elsbetiae_contig1835.5319.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig1835.5319.1 vs. uniprot
Match: D8LT38_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT38_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 5.910e-12
Identity = 33/43 (76.74%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:   79 QTRRWAIGLQALVRGWIGRRVAQSRRTHAQRIGEERAMGRVRW 121
            QTRRW IGLQAL RGW+GRR AQ RRT+ Q +GEERA GRVRW
Sbjct:    2 QTRRWVIGLQALTRGWLGRRRAQFRRTYTQHLGEERAAGRVRW 44
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1835.5319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT38_ECTSI5.910e-1276.74B box-type domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.190coord: 57..109
e-value: 1.7E-5
score: 26.3
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 80..109
score: 7.766

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1835contigL-elsbetiae_contig1835:6635..9156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1835.5319.1mRNA_L-elsbetiae_contig1835.5319.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1835 6635..9158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1835.5319.1 ID=prot_L-elsbetiae_contig1835.5319.1|Name=mRNA_L-elsbetiae_contig1835.5319.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MRVASTRLLKKKREREWQAAEKIQKFIRDRKHNAMIARRRDLFRAVCVQA
MYRATAKGKAGVVVRALGKRYIARRRFRQTRRWAIGLQALVRGWIGRRVA
QSRRTHAQRIGEERAMGRVRW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS