mRNA_L-elsbetiae_contig18293.5296.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: Q6XLX1_9PHYC (FirrV-1-C7 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX1_9PHYC) HSP 1 Score: 187 bits (474), Expect = 6.120e-56 Identity = 92/168 (54.76%), Postives = 118/168 (70.24%), Query Frame = 1 Query: 235 NRPSPGR----KTWKDMINAWKSGKHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTL-LVAPPD-KKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVL 720 N+PS R KTWKD++ +WK+GK LP I GSV+WETSAIKNGG+V YKEKT+ A +LP+ +R DSS F +L K V F + T LV PPD + +SHL FYKNAS+ +I+ LWK VA+ IEK +K H +YVSTHG G+ WLHVRI +P+Y+VT+VL Sbjct: 46 NKPSVSRGSKKKTWKDVLKSWKAGKDLPKIKGSVFWETSAIKNGGDVEYKEKTKSARSELPIHMRSDSSSFSEYLDGKLGPVSFNNSGGTCTLVCPPDGSDQEFSHLGQFYKNASKNQISALWKKVAMEIEKMMKKHKTVYVSTHGKGIPWLHVRICKSPKYFVTNVL 213
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: Q8QN82_ESV1K (EsV-1-207 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN82_ESV1K) HSP 1 Score: 186 bits (473), Expect = 6.550e-56 Identity = 85/154 (55.19%), Postives = 112/154 (72.73%), Query Frame = 1 Query: 256 KTWKDMINAWKSGKHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTLLVAPPDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 717 +TW D+I AWK+GK LPDI GSV+WETS GG+ +++KT+ A+ LPM+L D ++F H+KNK + V F S TLL+ PPD KN+SHLATFYK+ S E LWK VAV ++++LK + +YVSTHGTGV+WLHVR++S P YYVT V Sbjct: 51 QTWNDVIKAWKAGKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPAVFSHHMKNKKTPVAFNSFGGTLLIIPPDTGKNFSHLATFYKHGSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 204
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: D7FZG8_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG8_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.350e-48 Identity = 81/149 (54.36%), Postives = 107/149 (71.81%), Query Frame = 1 Query: 280 AW---KSGKHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTLLVAPPDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 717 AW ++GK LPDI GSV+WETS GG+ +++KT+ A+ LPM+L D ++F H+KNK + V F S TLLV PPD KN+SHLATFYK++S E LWK VAV ++++LK + +YVSTHGTGV+WLHVR++S P YYVT V Sbjct: 73 AWVLREAGKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPALFAHHMKNKKTPVAFNSFGGTLLVIPPDTGKNFSHLATFYKHSSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 221
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: B5LWM8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM8_9PHYC) HSP 1 Score: 166 bits (421), Expect = 4.810e-47 Identity = 77/162 (47.53%), Postives = 109/162 (67.28%), Query Frame = 1 Query: 235 NRPSPGRKTWKDMINAWKSGKHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRT-LLVAPPDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 717 +RP R TW D++ W G LP + SV+WETS I G+ +K+K AS DLPMS+ GDSS F +L +TS V FY+ +RT +LVAPPD KN++HL FYKN++ +E LW+ VA I K+++ + +YVSTHGT + WLH+R+ + P+YYV+D+ Sbjct: 124 SRPRKTRATWNDVVAKWYGGIDLPQVKSSVFWETSRISADGSSTFKQKQVAASRDLPMSMVGDSSAFTKYLYGQTSPVSFYNLNRTAVLVAPPDTGKNFAHLGLFYKNSTTQERKQLWRKVAEEIMKKIRKGESVYVSTHGTNIPWLHIRLDTVPKYYVSDL 285
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: D7G321_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G321_ECTSI) HSP 1 Score: 137 bits (345), Expect = 2.620e-37 Identity = 69/148 (46.62%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 283 WKSGKHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSA-VMFYSPSR--TLLVAPPDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDV 717 WK G+ LP+I SV+WE S NGG+ L+ K + A+ LP D + F HL+ V F S S T LV PPD KN+SH+ FYK+++ E LW+ VA+ +EK+L + +YVSTHG GV+W+HVR+S TPRY VTDV Sbjct: 2 WKEGRMLPEIKSSVFWECSPAYNGGDSLFHSKIKSAARVLPAKTPADRNPFAMHLRRARGVPVSFRSSSTPSTTLVIPPDSGKNFSHIGNFYKHSTLGERKALWRKVAIELEKKLARGETVYVSTHGGGVHWVHVRLSLTPRYNVTDV 149
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: A0A6C0E4B2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E4B2_9ZZZZ) HSP 1 Score: 90.1 bits (222), Expect = 6.800e-19 Identity = 50/160 (31.25%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 262 WKDMINAWKSG---KHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSR---TLLVAP-PDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVL 720 W +++ W++G K+ ++ G W TS +KN G V Y + + ++ R + F+ + KN + + P+ T+LV P P + KNY+ L F NAS+ + WK VA +K + +++S HG GV++ HVRIS++P+YY + L Sbjct: 3 WSEILANWENGIVLKYPKNVKGKFQWNTSVLKNDGKVAYLQTFRTNN---KLAQRQNKKDFQEYFKNSQNKYVVSFPNLNKDTMLVVPMPVRGKNYATLRDFIDNASEIQQQEFWKKVAEVAKKFMNEKGKVWISVHGLGVDYTHVRISTSPKYYFDNEL 159
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: A0A6C0HMK7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HMK7_9ZZZZ) HSP 1 Score: 88.6 bits (218), Expect = 2.620e-18 Identity = 52/158 (32.91%), Postives = 82/158 (51.90%), Query Frame = 1 Query: 262 WKDMINAWKSG---KHLPDITGSVYWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSR-TLLVAP-PDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYYVTDVL 720 W D++ W++G K+ ++ G W TS +KN GNV + + + + D + +NK V F + S+ T+LV P P + KNY+ L F NA + + WK VA +K + +++S HG GVN+ HVRIS+ P+YY + L Sbjct: 3 WSDVLTNWENGITLKYPKNVKGKFQWNTSVLKNDGNVAFTQTFRTNEKLAQIQNKKDFEEYIEKSQNKY-VVSFPNLSKDTMLVIPMPIQGKNYATLRDFIDNAPKTQQQEFWKHVAKVAKKFMNEKGKVWISVHGLGVNYTHVRISTRPKYYFDNEL 159
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: A0A2D7CMB5_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7CMB5_9PROT) HSP 1 Score: 83.2 bits (204), Expect = 3.660e-16 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 325 YWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAHLKN-----KTSAVMFYSPSRT-LLVAP-PDKKKNYSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPR 699 Y++TS + YKE + G + D S FK H++ K A F +P+ T +LV P P K KN++H F +NAS R+ +WK VA +EK LK D++++STHG V +LH+RI P+ Sbjct: 8 YFQTSCCNKDKSKNYKETWKKTDG---FKTKQDYSKFKEHIEKAQKEGKKFATHFLNPTGTNILVVPMPKKGKNFAHFRLFCENASVRQKKEVWKYVAEQVEKALKKSDIIFISTHGKDVPYLHIRIECFPK 136
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: A0A6T6WIS4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6WIS4_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 2.850e-14 Identity = 47/134 (35.07%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 325 YWETSAIKNGGNVLYKEKTEPASGDLPMSLRGDSSIFKAH---LKNKTSAVMFYSPSR-TLLVAPPDKKKN---YSHLATFYKNASQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYY 705 YWE + +K+G E S L ++ DS F H LK S +F + R L+ P KN ++HLA F +NA + + LW+ + L+ + ++VSTHGTGV WLHVRI + P+YY Sbjct: 33 YWECNPVKSGLFDRLLEMAFVESSQLS-DIKADSKRFDMHIQKLKGSNSVSVFPNLGRDAYLIVPAQSTKNAQTFAHLAAFVRNAPEDQKQALWEKTGKTFQTVLEQNKTVWVSTHGTGVYWLHVRIDTRPKYY 165
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Match: A0A397FT52_9MOLU (Uncharacterized protein n=1 Tax=endosymbiont GvMRE of Glomus versiforme TaxID=2039283 RepID=A0A397FT52_9MOLU) HSP 1 Score: 70.1 bits (170), Expect = 2.170e-10 Identity = 55/172 (31.98%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 259 TWKDMINAWKSG--------KHLPDITGSVY-WETSAIKNGGNVLYKE------KTEPASGDLPMSLRGDSSIFKAHLKNKTSAVMFYSPSRTLLVAP-PDKKKN-----YSHLATFYKNA--SQREINNLWKTVAVGIEKELKNHDVLYVSTHGTGVNWLHVRISSTPRYY 705 T KD IN K G KH S Y WE I N L K K++ G P + S F+ H+ +K ++ F S S +L+ P P+K +N Y +L +F +N + + W+ VA +E L++++ ++STHG G++WLHVRI P YY Sbjct: 26 TQKDFINLLKEGGQEITEALKHANSQLKSAYFWECPPITK--NTLNKPFECVVIKSKSLDGITP-----NHSPFQKHINDKKNS--FTSNSGNILIIPLPEKNENNEELDYKNLTSFIQNVPDTSEQKQTFWQEVAHQLEANLESNNPRWLSTHGLGISWLHVRIDKQPIYY 188 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18293.5296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18293.5296.1 >prot_L-elsbetiae_contig18293.5296.1 ID=prot_L-elsbetiae_contig18293.5296.1|Name=mRNA_L-elsbetiae_contig18293.5296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp KKCKPGYKRNARGTRCHAPKRAPRPTPKPIQTAKVTNVKAQRVKAPKPKAback to top mRNA from alignment at L-elsbetiae_contig18293:2288..3121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18293.5296.1 ID=mRNA_L-elsbetiae_contig18293.5296.1|Name=mRNA_L-elsbetiae_contig18293.5296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig18293:2288..3121- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18293:2288..3121- >mRNA_L-elsbetiae_contig18293.5296.1 ID=mRNA_L-elsbetiae_contig18293.5296.1|Name=mRNA_L-elsbetiae_contig18293.5296.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1458bp|location=Sequence derived from alignment at L-elsbetiae_contig18293:2288..3121- (Laminarionema elsbetiae ELsaHSoW15)back to top |