prot_L-elsbetiae_contig1829.5295.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1829.5295.1
Unique Nameprot_L-elsbetiae_contig1829.5295.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length344
Homology
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BLAST of mRNA_L-elsbetiae_contig1829.5295.1 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 2.130e-140
Identity = 246/321 (76.64%), Postives = 275/321 (85.67%), Query Frame = 0 
Query:   29 VVVSATFNAISPFRRQEDTTEDSWPLSGNWKEDKKIKDDEDFGKGRLGVRPRKIDRSEAMDMDLDPFTSNHVKRSVPSGEQEHRQAPRSARLFSAALERSRLPQGWKSRATAAATSFGDRERERERDTPG-----RQDVTLKRLGRVGVVEIASSMLLIAAETAQQVDSLEGLGQFRQEGGMPRVLMALSPTPYTTKASGIAAIRNLLRVSPESVAAEILEEAGTEALVELRRLVGAPGEPWSAAAARAAAAASDSLDAMRLQSEAVQLLQELSLASEDALSRVRELPNLVPALSAIAYPGTGPLGLLRGRIGRSLGSVGG 344
            V  +ATFN  +PFRR ++ +EDSW ++G+WK+DK +K DEDFGKG+LGVR RKID ++AMDMDLD F S H+KRSVPS  Q  RQ PRSARLFSAA+ERS LP+ WKSRA+ A      R+RE    +P      RQD TL+RLGRVGVVEIASSMLLIA+ETA +VDSLE LGQFRQEGGMPRVLMALSPTPYTTKASGIAAIRNLLRVSPESVA E+LEE GTE L+ELRRLVGAPGEPWS+AAARAAAAASD LDAMRLQ+EAVQLLQELSLASEDAL+RVR+LPNLVPALSAIAYPG GPLGLLRGRIGRSLG+VGG
Sbjct:  867 VATAATFNVAAPFRRLDENSEDSWQVTGSWKKDKNMKADEDFGKGKLGVRTRKIDPAKAMDMDLDKF-STHIKRSVPSDGQVQRQVPRSARLFSAAVERSHLPRRWKSRASPAF-----RDREGSSSSPSSPPVDRQDATLRRLGRVGVVEIASSMLLIASETAMEVDSLEELGQFRQEGGMPRVLMALSPTPYTTKASGIAAIRNLLRVSPESVAGEVLEETGTEGLLELRRLVGAPGEPWSSAAARAAAAASDRLDAMRLQAEAVQLLQELSLASEDALARVRDLPNLVPALSAIAYPGIGPLGLLRGRIGRSLGNVGG 1181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1829.5295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KSL4_9PHAE2.130e-14076.64PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..344
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1829contigL-elsbetiae_contig1829:17379..23085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1829.5295.1mRNA_L-elsbetiae_contig1829.5295.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1829 17379..23085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1829.5295.1 ID=prot_L-elsbetiae_contig1829.5295.1|Name=mRNA_L-elsbetiae_contig1829.5295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=344bp
LHARWRWRQQAAVGVAGAAAGVAAEVASVVVSATFNAISPFRRQEDTTED
SWPLSGNWKEDKKIKDDEDFGKGRLGVRPRKIDRSEAMDMDLDPFTSNHV
KRSVPSGEQEHRQAPRSARLFSAALERSRLPQGWKSRATAAATSFGDRER
ERERDTPGRQDVTLKRLGRVGVVEIASSMLLIAAETAQQVDSLEGLGQFR
QEGGMPRVLMALSPTPYTTKASGIAAIRNLLRVSPESVAAEILEEAGTEA
LVELRRLVGAPGEPWSAAAARAAAAASDSLDAMRLQSEAVQLLQELSLAS
EDALSRVRELPNLVPALSAIAYPGTGPLGLLRGRIGRSLGSVGG
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