prot_L-elsbetiae_contig18279.5289.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18279.5289.1
Unique Nameprot_L-elsbetiae_contig18279.5289.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length147
Homology
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A6H5KVJ9_9PHAE (Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVJ9_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.600e-43
Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 0
Query:   55 KKTPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRSELQ 137
            +K P+YVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKA KSPQQFCDEVSQEFR  L+
Sbjct:   67 EKPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKADKSPQQFCDEVSQEFRDLLK 149          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: W7TRH3_9STRA (Methionine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRH3_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.340e-39
Identity = 71/80 (88.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:   55 KKTPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRS 134
            KKT +YVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGR+V FLTGTDEHGQKVE SA KAGKSPQ F DEVSQ FRS
Sbjct:   89 KKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRS 168          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A836CKB9_9STRA (Methionine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.960e-39
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0
Query:   58 PFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFR 133
            P+Y+TTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGR+VMFLTGTDEHGQKV+ SA K GKSPQ+FCDEVSQ FR
Sbjct:   70 PYYITTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVMFLTGTDEHGQKVQESAAKQGKSPQEFCDEVSQSFR 145          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: UPI001106F896 (methionine--tRNA ligase n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI001106F896)

HSP 1 Score: 139 bits (351), Expect = 2.950e-36
Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 0
Query:   59 FYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFR 133
            FY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG EVMFLTGTDEHGQKVE SA  AGK+PQ+FCD+VSQ FR
Sbjct:    5 FYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYEVMFLTGTDEHGQKVEKSARAAGKTPQEFCDDVSQGFR 79          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A2E7HDI6_9PROT (Methionine--tRNA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HDI6_9PROT)

HSP 1 Score: 139 bits (350), Expect = 4.190e-36
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 0
Query:   56 KTPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFR 133
            K PFY+TTPIYYVND PHIGHAYTTLACDV+ARFMRLDG EVMFLTGTDEHGQKVE +A +AG  PQ FCD+VS+ FR
Sbjct:    4 KPPFYITTPIYYVNDNPHIGHAYTTLACDVLARFMRLDGHEVMFLTGTDEHGQKVEKAAEEAGIDPQSFCDKVSENFR 81          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A3M1K284_9PROT (Methionine--tRNA ligase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1K284_9PROT)

HSP 1 Score: 129 bits (324), Expect = 7.770e-36
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0
Query:   56 KTP-FYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRSELQ 137
            +TP +YVTTPIYYVND PHIGHAYTTLACDV+ARF RLDG  V+FLTGTDEHGQKV+ SA  AG +PQ+FCD VS+ FR+ L+
Sbjct:    4 ETPRYYVTTPIYYVNDVPHIGHAYTTLACDVLARFKRLDGYRVLFLTGTDEHGQKVQKSAEAAGIAPQEFCDRVSKRFRALLE 86          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A3B0SYP8_9ZZZZ (Methionine--tRNA ligase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SYP8_9ZZZZ)

HSP 1 Score: 138 bits (347), Expect = 1.140e-35
Identity = 64/84 (76.19%), Postives = 70/84 (83.33%), Query Frame = 0
Query:   55 KKTPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRSELQY 138
            ++  FY+TTPIYYVND PHIGHAYTTLACDVIARF RLDG EVMFLTGTDEHGQKVE SA   GK PQ+FCDEVSQ FR   ++
Sbjct:    3 ERPAFYITTPIYYVNDIPHIGHAYTTLACDVIARFKRLDGFEVMFLTGTDEHGQKVEKSAAAKGKDPQEFCDEVSQRFRELAEF 86          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A501PSU6_9PROT (Methionine--tRNA ligase n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PSU6_9PROT)

HSP 1 Score: 137 bits (346), Expect = 1.530e-35
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0
Query:   59 FYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFR 133
            FY+TTPIYYVNDKPHIGHAYTTLACD +ARF RLDG +VMFLTGTDEHGQKVE SAL AGK+P +FCDEVSQ FR
Sbjct:    5 FYITTPIYYVNDKPHIGHAYTTLACDFLARFKRLDGYDVMFLTGTDEHGQKVEKSALAAGKTPIEFCDEVSQRFR 79          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: UPI0011DD0A1C (class I tRNA ligase family protein n=1 Tax=Azospirillum sp. B506 TaxID=137721 RepID=UPI0011DD0A1C)

HSP 1 Score: 130 bits (326), Expect = 1.680e-35
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 0
Query:   59 FYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFR 133
            FY+TTPIYYVND PHIGHAYTTLACDV+ARFMRLDG +V FLTGTDEHGQKVE SA KAG +PQ+F D VSQ FR
Sbjct:    7 FYLTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGYDVKFLTGTDEHGQKVEKSAEKAGIAPQEFTDRVSQNFR 81          
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Match: A0A2E6ST17_9PROT (Methionine--tRNA ligase (Fragment) n=1 Tax=SAR116 cluster bacterium TaxID=2024888 RepID=A0A2E6ST17_9PROT)

HSP 1 Score: 135 bits (341), Expect = 1.810e-35
Identity = 64/80 (80.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:   57 TPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRSEL 136
            TP+Y+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG +V FLTGTDEHGQKV+A+A KAG SPQQF D VSQ FR  L
Sbjct:    2 TPYYLTTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVQAAAEKAGISPQQFTDTVSQNFRDLL 81          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18279.5289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVJ9_9PHAE1.600e-4391.57Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
W7TRH3_9STRA3.340e-3988.75Methionine--tRNA ligase n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CKB9_9STRA4.960e-3988.16Methionine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
UPI001106F8962.950e-3685.33methionine--tRNA ligase n=1 Tax=Luteithermobacter ... [more]
A0A2E7HDI6_9PROT4.190e-3680.77Methionine--tRNA ligase n=1 Tax=Rhodospirillaceae ... [more]
A0A3M1K284_9PROT7.770e-3673.49Methionine--tRNA ligase (Fragment) n=1 Tax=Alphapr... [more]
A0A3B0SYP8_9ZZZZ1.140e-3576.19Methionine--tRNA ligase n=1 Tax=hydrothermal vent ... [more]
A0A501PSU6_9PROT1.530e-3584.00Methionine--tRNA ligase n=1 Tax=Emcibacter nanhaie... [more]
UPI0011DD0A1C1.680e-3581.33class I tRNA ligase family protein n=1 Tax=Azospir... [more]
A0A2E6ST17_9PROT1.810e-3580.00Methionine--tRNA ligase (Fragment) n=1 Tax=SAR116 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033911Methioninyl-tRNA synthetase core domainPRINTSPR01041TRNASYNTHMETcoord: 61..74
score: 56.35
coord: 93..107
score: 56.3
IPR015413Methionyl/Leucyl tRNA synthetasePFAMPF09334tRNA-synt_1gcoord: 59..137
e-value: 1.1E-26
score: 93.6
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 56..144
e-value: 2.6E-34
score: 120.8
NoneNo IPR availablePANTHERPTHR43326:SF5coord: 18..135
NoneNo IPR availablePANTHERPTHR43326FAMILY NOT NAMEDcoord: 18..135
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 57..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18279contigL-elsbetiae_contig18279:1180..2560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18279.5289.1mRNA_L-elsbetiae_contig18279.5289.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18279 1180..2560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18279.5289.1 ID=prot_L-elsbetiae_contig18279.5289.1|Name=mRNA_L-elsbetiae_contig18279.5289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp
AATDARTRRQSSSSSSSTAVAVAAAAATSTTTMRATATSAGGGDGDGQAG
GGGGKKTPFYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFL
TGTDEHGQKVEASALKAGKSPQQFCDEVSQEFRSELQYGYIRLGRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033911MetRS_core
IPR015413Methionyl/Leucyl_tRNA_Synth
IPR014729Rossmann-like_a/b/a_fold