prot_L-elsbetiae_contig18231.5273.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18231.5273.1
Unique Nameprot_L-elsbetiae_contig18231.5273.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length150
Homology
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 4.360e-88
Identity = 142/149 (95.30%), Postives = 147/149 (98.66%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED 149
            MPQSKM DVANFCNAFPNVEM FEVQESDDITAGDPV+LVV+LER+GEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAV+LMVGAAGSDDES+ED
Sbjct: 2047 MPQSKMGDVANFCNAFPNVEMDFEVQESDDITAGDPVTLVVSLEREGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVELMVGAAGSDDESEED 2195          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2JTU2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTU2_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.970e-52
Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSD 143
            +P  KMADVA FCN +PN+++ FEV ++DD+TAGD V + V LER+ +EDE   E   GKV APL+PK K E WW+++GD K+N LL++KRV+LQ+K + KL+F APDE G++ L LF M DSY+GCDQEY+V L V    SD
Sbjct:   48 LPDHKMADVAVFCNNYPNIDVSFEVHDADDVTAGDAVQISVQLEREMDEDEMVDEASLGKVSAPLFPKEKNEGWWIIIGDTKRNVLLSLKRVSLQQKQKLKLQFMAPDEAGDYELTLFCMSDSYLGCDQEYSVPLSVAVGDSD 190          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S1ZT27_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT27_TRICV)

HSP 1 Score: 171 bits (432), Expect = 8.050e-49
Identity = 85/147 (57.82%), Postives = 107/147 (72.79%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPE--GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDE 145
            +P  KMADVA FCN +PNV++ F VQ++DD+TAGDPV +VV LER+ +EDE E E     G V APL+PK K E WW+V+GD K N+LL++KRV LQR  +  LEF AP+E G++ L LF M DSY+GCDQEY+V L V    SDDE
Sbjct:  257 LPDEKMADVAVFCNNYPNVDVTFTVQDADDVTAGDPVQVVVKLEREIDEDEMEEEDLSQLGVVSAPLFPKEKREGWWIVIGDTKTNSLLSLKRVNLQRTQKVALEFMAPEEAGDYNLTLFCMSDSYLGCDQEYSVPLNVAVGESDDE 403          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S0FRC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FRC3_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.840e-48
Identity = 79/144 (54.86%), Postives = 107/144 (74.31%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE-DEPE-GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGS 142
            +P  KMADVA FCN +PNV++ FEVQ++D++TAGDPV+++V LER+ +E+E DE E    G V APL+PK K E WW+VVGD K NTLL++KR++LQ   +  +EF AP+E G++ L LF M DSY+GCDQEY++ L V    S
Sbjct:   32 LPDDKMADVAVFCNNYPNVDISFEVQDADEVTAGDPVTMLVKLEREIDEEEMDEEEISQLGVVSAPLFPKEKREGWWIVVGDTKTNTLLSLKRISLQTTQKVTVEFLAPEEAGDYDLTLFCMSDSYLGCDQEYSIPLSVAVGES 175          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2NTJ9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NTJ9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.610e-47
Identity = 80/143 (55.94%), Postives = 106/143 (74.13%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSD 143
            +P  KMADVA FCN +PN+++ FEV ++DD+TAGD V + V LER+ +EDE   E   GKV APL+PK K E WW+++GD K+N LL++KRV+LQ+K + KL+F APDE G++ L LF M DSY+GCDQEY+V L V    SD
Sbjct: 1590 LPDHKMADVAVFCNNYPNIDVSFEVHDADDVTAGDAVQISVQLEREMDEDEMVDEASLGKVSAPLFPKEKNEGWWIIIGDTKRNVLLSLKRVSLQQKQKLKLQFMAPDEAGDYELTLFCMSDSYLGCDQEYSVPLSVAVGDSD 1732          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S2E543_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E543_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.680e-46
Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE-DEPE-GGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDD 144
            +P  KMADVA FCN +PN+++ F VQ++DD+ AGDPV ++VTLER+ +EDE DE E    G V APL+PK K E WW+VVGD K N+LL++KRV+LQ+  +  LEF AP+E G++ L LF M DSY+GCDQEY+V L V AA S+D
Sbjct: 1839 LPDEKMADVAVFCNNYPNIDVDFNVQDADDVVAGDPVQMIVTLEREVDEDEMDEDEINQMGLVAAPLFPKEKREGWWIVVGDTKTNSLLSLKRVSLQKIQKVALEFIAPEEAGDYNLTLFCMSDSYLGCDQEYSVPLSVAAAESED 1984          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: B5YNG2_THAPS (RNA or DNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNG2_THAPS)

HSP 1 Score: 167 bits (422), Expect = 5.100e-45
Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERD---------GEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED 149
            +P  KMADVA FCN +PN+E+ F+VQ+++DITA DPV + V LER+         G+ D D     +GKV APL+PK K E WW+V+GD K N+LL++KRVTLQR  +  LEF AP+E G++ L LF M DSY+GCDQEY+V + V    SDD+S E+
Sbjct: 1933 LPDEKMADVAVFCNNYPNIEVAFDVQDANDITASDPVQVSVKLEREVXXXXXXXXGQSDAD-----FGKVAAPLFPKEKREGWWIVIGDTKTNSLLSLKRVTLQRSQKVMLEFMAPEEPGDYNLTLFCMSDSYLGCDQEYSVPISVAVGESDDDSSEE 2085          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S1UZY7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZY7_9STRA)

HSP 1 Score: 166 bits (421), Expect = 6.590e-45
Identity = 88/153 (57.52%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGG----WGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED 149
            +P SKMADVA FCN +PNV++ FEVQ+ DD+T GDPV +VVTLER  E DEDE E G     G V APL+P  K E WW+VVGD   N LL++KRV LQ K +  LE  AP+E G++T +LF M DSY+GCDQEY + L V A G +D+SD D
Sbjct:  897 LPDSKMADVAVFCNNYPNVDVTFEVQDPDDVTTGDPVQIVVTLER--EIDEDEMEEGDVAQLGLVSAPLFPAEKREGWWIVVGDTSTNGLLSLKRVNLQHKQKVVLECVAPEEAGDYTFKLFCMSDSYLGCDQEYDIPLSV-AVGEEDDSDSD 1046          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A1Z5K1K6_FISSO (Pre-mRNA-splicing helicase BRR2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1K6_FISSO)

HSP 1 Score: 166 bits (421), Expect = 6.970e-45
Identity = 80/140 (57.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDEDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAA 140
            +P  KMADVA FCN +PN+E+ + V+++D+ITAGD V +VVTLER+ +E E+  E   GKV APL+P  K EAWWVV+GD   +TL +IKRV LQR+ +  LEF AP+  G++ L LF M DSY+GCDQEY+V L VGAA
Sbjct: 2020 LPDDKMADVATFCNTYPNIEVTYTVEDADEITAGDAVKMVVTLEREIDEGEEVDEQELGKVVAPLFPGEKKEAWWVVIGDLANSTLFSIKRVNLQRRKQLTLEFLAPESAGDYDLTLFCMSDSYLGCDQEYSVSLNVGAA 2159          
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Match: A0A7S4K326_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K326_9STRA)

HSP 1 Score: 165 bits (418), Expect = 9.590e-45
Identity = 84/159 (52.83%), Postives = 113/159 (71.07%), Query Frame = 0
Query:    1 MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEEDE--------DEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRAKLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMV--GAAGSDDESDED 149
            +P  KMADVA FCN +PN+++ F+V+++DD+TAGDPV +VV LER+ +ED         +E     G V APL+PK K E WW+V+GD K N+LL++KRV L+RK R  LEF AP+E G++ L LF M DSY+GCDQEY+V L V  G + S++ES ED
Sbjct:  611 LPDEKMADVAVFCNNYPNIDVEFDVRDADDVTAGDPVQIVVALEREVDEDXXXXXXXXXEEDMERLGVVSAPLFPKEKREGWWIVIGDTKTNSLLSLKRVGLKRKQRVTLEFVAPEEAGDYDLTLFCMSDSYLGCDQEYSVPLSVAIGESDSEEESSED 769          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18231.5273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW4_ECTSI4.360e-8895.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2JTU2_9STRA2.970e-5255.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1ZT27_TRICV8.050e-4957.82Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0FRC3_9STRA4.840e-4854.86Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2NTJ9_9STRA2.610e-4755.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2E543_9STRA1.680e-4657.53Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
B5YNG2_THAPS5.100e-4552.53RNA or DNA helicase n=1 Tax=Thalassiosira pseudona... [more]
A0A7S1UZY7_9STRA6.590e-4557.52Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1Z5K1K6_FISSO6.970e-4557.14Pre-mRNA-splicing helicase BRR2 n=2 Tax=Fistulifer... [more]
A0A7S4K326_9STRA9.590e-4552.83Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 17..148
e-value: 9.5E-44
score: 150.0
IPR004179Sec63 domainPFAMPF02889Sec63coord: 12..133
e-value: 3.2E-22
score: 78.9
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 3..147
NoneNo IPR availablePANTHERPTHR24075:SF13U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASEcoord: 3..147
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 18..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18231contigL-elsbetiae_contig18231:726..2626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18231.5273.1mRNA_L-elsbetiae_contig18231.5273.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18231 453..2664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18231.5273.1 ID=prot_L-elsbetiae_contig18231.5273.1|Name=mRNA_L-elsbetiae_contig18231.5273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
MPQSKMADVANFCNAFPNVEMGFEVQESDDITAGDPVSLVVTLERDGEED
EDEPEGGWGKVCAPLYPKSKTEAWWVVVGDKKKNTLLAIKRVTLQRKTRA
KLEFAAPDEVGEHTLELFLMCDSYVGCDQEYAVDLMVGAAGSDDESDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR004179Sec63-dom
IPR014756Ig_E-set