mRNA_L-elsbetiae_contig182.5253.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig182.5253.1 vs. uniprot
Match: D7FQ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ57_ECTSI) HSP 1 Score: 791 bits (2044), Expect = 2.470e-269 Identity = 546/1035 (52.75%), Postives = 660/1035 (63.77%), Query Frame = 1
Query: 70 MERELEVQIKESLEESQALREKFENDLEYVRKDAERRLAERSRHAKKQQVRWKEQESSMARERADMTQRAQLLQEQLVASAREAGLAQERIYQLESDAQSMRLSPPQVVERTDPGSAIEVMRLRDKVAAREEQARRAQRAAAEAQEAVGKESAINQGLQKDVDNARHRLLTVQGSLAEVSEENAGLKRELEGERIKTAAGSRRLVDAVERQDNALATIRLDSAQLREQRDRRGVPDRYSAVLGIKLHELKRKQVAGRLLHALSLARNRSLARALRALVVGVTRDIYSKQLSCQQREHASEVASLEEDVHRSLARFSDARRRLDRLRDSREIVAELAVSAYRRRRQGTMIXXXXXXXXEKRSG-----VQRWCFWSWARVARDGHAAVARRTRMTEAEKELPGVKEMLSAAVERARGAEAERDRHGRTAEALTEETTRRTAELEVARAALKATQSVALSVQNRYARLGAERVHRTLEQNRRDRVASAFRSWVDAGSK---------------PEVSRTRISRCAVARPEDFTTPSANSGVQN--GPPPPVALETRE-AAVNTLDVAEEGETARPAPQTPTRSVLSNAGAKEDRQHAINETGANTEPKA-----PVLISVSGNNQLGSNQRLNPWSDQVDGAL-----------------TPVTASRGKVENESRDHDVGGFPFPVIAPSPAHSITPS--TAPGRPAPVTEDVNASLCNSASGVSVPVARPGGGGRSANPDPPRVMLALRAAVGNELYAVGERLLRCIEADHREVQGKAYRPIPVTGAERDQFLAYLQDATRGPLRRTVLRFLRVQESYRAVAVERDREGAERSREERRV---GHGLGGGGDGGG----VRDARRKSRDKQCIEENQYEVSSLMTGPLSSPAEKARAARVLRDLTVPLLSDAEDAWARHRQPW---PRAA--TASSLSSSKRERRNTPVRMGATKSTASTRQRERACRL--GSGDRRGNELSSRGRKRLPCLDSGAGPRKFWEAIAGPRLAEARWNLGAKVVENQLWSLAMLVREQD 2991
MERELE Q+K+SL ESQALREKF++DLE +++DA+RRL E ++ +WKE E+AD Q+A+ LQEQL+ SA E +A+ERI+QLES+AQS+R SPPQVVER DP + EVMRLRDKVAAR+EQARRAQRAAAEAQEAVG+ESAINQG Q+DVDNARHRLLTVQGSLAE+SEENAGL+RELE ERIKT AGSRRL DAV+RQDNALA +R DSAQLREQRDR + SA+LGIKLH+L++KQ A RLLHAL LAR+RSLA ALRALVV VT DI+ K+ + QQ EHASEVASLE DV + R +ARR LD LRDSRE V+ L V A RR QG M+ EK G V RWCFW WARVA+ G AVA++ R EAEKEL G +E+L AA E AR AEAE ++H TAEAL E+ +RTAELEVAR AL A +S A S + R RLGA RV + LE+NRRDR+A F WVDAG P+ R +S + ++ ++ G PP A T + A++T G + + AG ED+ + A+TE + L SV+ +N + R + +D V+ + TPVTAS + N+ + F PSP T S TA +PA + +S SG S PV+ PGG G ANPD PR++L+LRAAVG ELYAVGERLLRC+EAD+RE G++Y P+P+T AER+QF L+DA RG LRR VL FLRVQES+RA AVE+DR E++R+ RRV G GG +R ARRKS + EE Q +SSL TGPLS+ AEKARAARVLRD VPLL +A DAW RHRQPW PRA A++ S R +R T T STRQ+ RL G+GD G LSS GR RL CLDSGAGPRKFWEA+AGPRL EA WN+ K +E QLW LAMLVR D
Sbjct: 1 MERELEAQMKDSLAESQALREKFQDDLECMQQDAQRRLVE-------EKAKWKEHILRAEGEKADAIQQAEFLQEQLITSANEVWIARERIFQLESEAQSIRSSPPQVVERADPAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELENERIKTVAGSRRLADAVDRQDNALAEVRRDSAQLREQRDRLA---QDSAILGIKLHQLRKKQAARRLLHALYLARHRSLATALRALVVRVTNDIHLKKQTRQQEEHASEVASLEADVQGAETRCRNARRGLDALRDSRETVSRLTVKACWRRHQG-MVIAGAAAEEEKPGGDASALVVRWCFWGWARVAQGGCTAVAKKARRVEAEKELAGARELLLAADENARCAEAEHNQHLATAEALAEQIKQRTAELEVARTALGAAKSTASSARGRCIRLGAARVLKVLERNRRDRLAQTFSCWVDAGRVFPVVPSTEEDIASLGPQEGRRVVSETCAGHRQGLAQQQGDALARSRDGFGPPTADSTTDLCALSTTTSGGRG----------AQGGMHTAGIDEDKGFVV----ASTEDEGGGAHLDALPSVAASNDRSRDNRRDAHTDGVNDTMASNGNTPAPLDVSSIPSTPVTASHKRPSNQDQRTPRCSSLFVDGYPSPGRRSTTSLSTASSKPA--------ASKSSISGASNPVSGPGGSGWPANPDLPRLVLSLRAAVGEELYAVGERLLRCVEADYRETHGRSYHPVPITPAEREQFRVCLEDAARGRLRRAVLTFLRVQESHRAAAVEKDRGNVEKTRQGRRVRVNGWTCGGXXXXXXXXXCLRGARRKSA--RNAEEGQDGISSLTTGPLSTTAEKARAARVLRDRLVPLLENAADAWGRHRQPWQNTPRAVGRRAATESDKSRFQRRT---------TVSTRQKNNPHRLRRGNGDETG--LSSPGRGRLCCLDSGAGPRKFWEAVAGPRLVEASWNVDIKALEQQLWDLAMLVRGPD 989
BLAST of mRNA_L-elsbetiae_contig182.5253.1 vs. uniprot
Match: A0A6H5L397_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L397_9PHAE) HSP 1 Score: 738 bits (1906), Expect = 1.190e-249 Identity = 509/993 (51.26%), Postives = 615/993 (61.93%), Query Frame = 1
Query: 340 IYQLESDAQSMRLSPPQVVERTDPGSAIEVMRLRDKVAAREEQARRAQRAAAEAQEAVGKESAINQGLQKDVDNARHRLLTVQGSLAEVSEENAGLKRELEGERIKTAAGSRRLVDAVERQDNALATIRLDSAQLREQRDRRGVPDRYSAVLGIKLHELKRKQVAGRLLHALSLARNRSLARALRALVVGVTRDIYSKQLSCQQREHASEVASLEEDVHRSLARFSDARRRLDRLRDSREIVAELAVSAYRRRRQGTMIXXXXXXXXEKRSG-----VQRWCFWSWARVARDGHAAVARRTRMTEAEKELPGVKEMLSAAVERARGAEAERDRHGRTAEALTEETTRRTAELEVARAALKATQSVALSVQNRYARLGAERVHRTLEQNRRDRVASAFRSWVDAGSK---------------PEVSRTRISRCAVARPEDFTTPSANSGVQNGP---PPPVALETREAAVNTLDVAEEGETARPAPQTPTRSVLSNAGAKEDRQHAINETGANTEPKA-----PVLISVSGNNQLGSNQRLNPWSDQVDGAL-----------------TPVTASRGKVENESRDHD------VGGFPFPVIAPSPAHSITPSTAPGRPAPVTEDVNASLCNSASGVSVPVARPGGGGRSANPDPPRVMLALRAAVGNELYAVGERLLRCIEADHREVQGKAYRPIPVTGAERDQFLAYLQDATRGPLRRTVLRFLRVQESYRAVAVERDREGAERSREERRV---GHGLGGGGD----GGGVRDARRKSRDKQCIEENQYEVSSLMTGPLSSPAEKARAARVLRDLTVPLLSDAEDAWARHRQPW---PRAA--TASSLSSSKRERRNTPVRMGATKSTASTRQRERACRL--GSGDRRGNELSSRGRKRLPCLDSGAGPRKFWEAIAGPRLAEARWNLGAKVVENQLWSLAMLVREQDQE---EYRQPLPLSRCDRLRRTLDVRIYELLLLHVRTRMIWDGV 3114
++QLES+AQSMR SPPQVVER DP + EVMRLRDKVAAR+EQARRAQRAAAEAQEAVG+ESAINQG Q+DVDNARHRLLTVQGSLAE+SEENAGL+RELE ERIKT +GSRRL DAVERQDNALA +R DSAQLREQRDRR SA+LGIKLH+L++KQ AGRLLHAL LAR+RSLA ALRALVV VT DI+ K+ +E R DARRRLD LRD+RE V+ L V A RR QG M+ EK G V RWCFW WARVA+ G VA++ R EAEKEL G +E+L AA E AR AEAE ++H T AL E+ +RTAELEVAR AL A +S A S + R RLGA RV + L +NRRDR+A F WVDAG P+ R +S + ++ ++ PP T A++T G + A ED+ + A+TE + L SV+ +N + + ++ V+G + TPV AS + N+ + VGG+P +P + + STA +PA ++ SG S PV PGG G SANPD PR++L+LRAAVG ELYAVGERLLRC+EADHRE+ GK Y P+P+T AER+QF L+DA RG LRR VL FLRVQES+RA AVE+DR E++R+ RRV G GGGG GG +R AR KS + EE Q E+SSL TGPLS+P+EKARAARVLRD VPLL +A DAW RHRQPW PRA A++ S + R +R T T STRQ+ RL G+GD G LSS R RL CLDSGAGPRKFWE +AGPRL EA WN+ K +E QLW LAMLVR D E Q L L+RC+ LRRTLDVR++E+LLL++RTR+IWDG+
Sbjct: 1 MFQLESEAQSMRSSPPQVVERADPAAVAEVMRLRDKVAARDEQARRAQRAAAEAQEAVGRESAINQGFQRDVDNARHRLLTVQGSLAELSEENAGLRRELESERIKTVSGSRRLADAVERQDNALAEVRRDSAQLREQRDRRD-----SAMLGIKLHQLRKKQAAGRLLHALDLARHRSLATALRALVVRVTNDIHLKK--------GAET------------RCRDARRRLDALRDTRETVSRLTVKACWRRHQG-MVIAGAAAEEEKPGGDASALVVRWCFWGWARVAQGGCTVVAKKARRVEAEKELTGARELLLAADENARRAEAEHNQHLATVGALAEQIKQRTAELEVARTALDAAKSTASSARGRCIRLGAARVLKVLARNRRDRLAQTFSCWVDAGRVFPVVPSNEEVIASLGPQQGRRAVSETCAGHRQGLAQQQGDAPAESRDGFGPPKADSTTHLCALSTTTSGGRG----------AQGGAHTADMGEDKGFVV----ASTEDEGGGAYLDALPSVAASNDPSRDNSRDAHTNGVNGTMASNGNTPAPLDISSIPSTPVAASHKRPSNQHQGTPRCSSLFVGGYP----SPGRRSTTSLSTASSKPAAAKSNI--------SGASNPVPVPGGSGWSANPDLPRLVLSLRAAVGEELYAVGERLLRCVEADHREIHGKLYHPVPITPAEREQFHVCLEDAARGRLRRAVLTFLRVQESHRAAAVEKDRGNVEKTRQGRRVRMNGWTCGGGGXXXXXGGCLRGARPKSA--RNAEEGQDEISSLTTGPLSTPSEKARAARVLRDRLVPLLENAADAWGRHRQPWQNMPRAVGRRAATESDTSRFQRRT---------TVSTRQQNNPHRLRRGNGDETG--LSSPRRGRLCCLDSGAGPRKFWETVAGPRLVEASWNVDIKALEQQLWDLAMLVRGPDLRGHCERHQGLALNRCELLRRTLDVRVFEVLLLYMRTRLIWDGI 928
BLAST of mRNA_L-elsbetiae_contig182.5253.1 vs. uniprot
Match: A0A836CC54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC54_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.360e-28 Identity = 100/267 (37.45%), Postives = 152/267 (56.93%), Query Frame = 1
Query: 52 STQLGRMERELEVQIKESLEESQALREKFENDLEYVRKDAERRLAERSRHAKKQQVRWKEQESSMARERADMTQRAQLLQEQLVASAREAGLAQERIYQLESDAQSMRLSPPQVVERTDPGSAIEVMRLRDKVAAREEQARRAQRAAAEAQEAVGKESAINQGLQKDVDNARHRLLTVQGSLAEVSEENAGLKRELEGERIKTAAGSRRLVDAVERQDNALATIRLDSAQLREQRDRRGVPDRYSAVLGIKLHELKRKQVAGRLLHA 852
+ QL R+E L Q++E LEE+ + E + ++ +AE ++ R + ++ + E +AR RA + + A+ LQ+QLV + + L+++R LES ++L PPQ VER DP +A ++ +LRDK++ E R QR A ++ EA+G+E A LQ+D+D ARH+LLT+QGSLAE + EN L RELE ER++ A RR ++ E ALA R + LR QRD +A +L L R + A R+L A
Sbjct: 5 AAQLLRLEHALAEQVQEDLEEAAISQAHHEEVVSKLQAEAEAAVSREHRRHRSKETKLHEALKRVARSRAALQREAEALQDQLVLVSAQLRLSRQRSLDLESAMGELKLRPPQQVERPDPDAAFQIAQLRDKLSGTETALRECQREARDSAEALGRERAAGLALQRDLDAARHKLLTLQGSLAEGARENGALMRELEAERVRAVAQQRRAAESEEALAAALAAARAAADGLRSQRD---AFCEAAATSAARLRRLSRAEAARRVLQA 268
BLAST of mRNA_L-elsbetiae_contig182.5253.1 vs. uniprot
Match: A0A7S2SEX3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEX3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.340e-7 Identity = 105/373 (28.15%), Postives = 162/373 (43.43%), Query Frame = 1
Query: 2149 PRVMLALRAAVGNELYAVGERLLRCIEADHRE---VQG-----KAYRPIPVTGAERDQFLAYLQDATRGPLRRTVLRFLRVQESYRAVAVERDREGAERSREERRVGHGLGGGGDGGGVRDARRKSRDKQCIEENQYEVSSLMTGPLSSPAEKARAA-----------RVLRDLTVPLLSDAEDAWARHRQPWPRAATASSLSSSKRERRNTPV----RMGATKSTASTRQRERA---------CRLGSGDRRG-----------------NELSSRGRKR---LPCLDSGAGPRKFWEAIAGPRLAEARWNLG---AKVVENQLWSLAMLVREQDQEEYRQPLPLSRCDRLRRTLDVRIYELLLLHVRTRMI 3102
P ++ LR + +E+Y VGE L R +EAD RE + G + RP PV + + F L ++ +G LR +L +LR ES R + R AE S A + RD+ + + S G +SP + RAA VL +L + W HR+ A A+S+ + E TP G T TA T ++ A GDR G +L+++ R+R L +D+GAGP++FW+ I P+ + G A+ +E +W L +LVR QD+++ L L+R + R+ LD+RIYELLLL++R ++
Sbjct: 188 PEMVGILRKRLADEVYKVGEALFRVVEADFREPAVLTGLKKTFRKRRPKPVDVTQLEHFHKRLTESAKGSLRWLLLIYLRTYESLRELFERR----AELS---------------------ATDEERDRWRLSRLEPPKSP---GTATSPFKSYRAAPFDDVEPPEVLSVLEKRITGVLDEIRRVWNSHRR-----AAATSMQGAA-ETMGTPGFDSWMEGTT--TADTADQDGADGQPDDPSSFTYVPGDRAGYLHTCRHIRTRRGCAHCTQLANQERRRRLALGFIDTGAGPKEFWQNI-NPKKNDTFRGKGTPSAEKLEAHMWRLVLLVRCQDRKK---GLRLARHESQRKLLDMRIYELLLLYMRQELV 520 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig182.5253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig182.5253.1 >prot_L-elsbetiae_contig182.5253.1 ID=prot_L-elsbetiae_contig182.5253.1|Name=mRNA_L-elsbetiae_contig182.5253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1038bp MSLAAIYPSAVGTYASPSTQLGRMERELEVQIKESLEESQALREKFENDLback to top mRNA from alignment at L-elsbetiae_contig182:5418..11925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig182.5253.1 ID=mRNA_L-elsbetiae_contig182.5253.1|Name=mRNA_L-elsbetiae_contig182.5253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6508bp|location=Sequence derived from alignment at L-elsbetiae_contig182:5418..11925- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig182:5418..11925- >mRNA_L-elsbetiae_contig182.5253.1 ID=mRNA_L-elsbetiae_contig182.5253.1|Name=mRNA_L-elsbetiae_contig182.5253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6228bp|location=Sequence derived from alignment at L-elsbetiae_contig182:5418..11925- (Laminarionema elsbetiae ELsaHSoW15)back to top |