prot_L-elsbetiae_contig1819.5248.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1819.5248.1
Unique Nameprot_L-elsbetiae_contig1819.5248.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
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BLAST of mRNA_L-elsbetiae_contig1819.5248.1 vs. uniprot
Match: D8LS33_ECTSI (Conserved Cys-containing small protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS33_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.500e-43
Identity = 91/144 (63.19%), Postives = 103/144 (71.53%), Query Frame = 0 
Query:    1 MREKSEEEV-LTAELSSCMLSHYKYCAAGVLLGLPLSIHKKSYWPVALAAVAGTAADFKEGSANCKQQREALMACVARRKAAEAAKTQSAQPLPAGTTAGD---QAQEDWPAGGQQWPEKG-WEQSF-DGSGGQEADSEGKTKW 138
            MRE+S+EE  L AELSSCMLSHYKYCAAGVLLGLPLS+HKKSYWPV LAAVAGTAADFKEG+A+C+ QREALMA +AR+ A +A   Q A    AGTT        QE WP  G+       WEQ+F D  GG+E D EG  KW
Sbjct:    1 MREQSKEEAELAAELSSCMLSHYKYCAAGVLLGLPLSVHKKSYWPVTLAAVAGTAADFKEGTADCRPQREALMAFIARKNAGQAKAQQEAS---AGTTENPGQHSPQEGWPGEGRXXXXXXXWEQTFHDRDGGKEVDREGGDKW 141
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1819.5248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS33_ECTSI1.500e-4363.19Conserved Cys-containing small protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1819contigL-elsbetiae_contig1819:21029..22944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1819.5248.1mRNA_L-elsbetiae_contig1819.5248.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1819 21029..23541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1819.5248.1 ID=prot_L-elsbetiae_contig1819.5248.1|Name=mRNA_L-elsbetiae_contig1819.5248.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
MREKSEEEVLTAELSSCMLSHYKYCAAGVLLGLPLSIHKKSYWPVALAAV
AGTAADFKEGSANCKQQREALMACVARRKAAEAAKTQSAQPLPAGTTAGD
QAQEDWPAGGQQWPEKGWEQSFDGSGGQEADSEGKTKW*
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