prot_L-elsbetiae_contig1809.5202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1809.5202.1
Unique Nameprot_L-elsbetiae_contig1809.5202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length186
Homology
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: D8LMD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD9_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.520e-93
Identity = 138/185 (74.59%), Postives = 152/185 (82.16%), Query Frame = 0
Query:    1 NARTDALDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSHV 185
            ++   ALD +PV+TKSISSG IGLLGD+LAQ VE     A  PW T A VWRSCAVMIDG  INGPLLHYAY+ LE RMPAG+SILAA+ QVC   VDV VIDPVFAF+FVWSTGLIEGRSV  EIL T+ H YPT+VLWLI IG+ WAP+QIYLFNRYPVQYRVLTADLIDLVWTCV+S FSHV
Sbjct:    4 DSNASALDAYPVLTKSISSGFIGLLGDVLAQWVEYLFGAAFPPWKTTAMVWRSCAVMIDGLLINGPLLHYAYEMLESRMPAGDSILAAMTQVC---VDVLVIDPVFAFMFVWSTGLIEGRSVRGEILPTIVHHYPTLVLWLIVIGVGWAPIQIYLFNRYPVQYRVLTADLIDLVWTCVSSLFSHV 185          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: D8LMD8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD8_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 6.340e-50
Identity = 88/179 (49.16%), Postives = 124/179 (69.27%), Query Frame = 0
Query:    5 DALDKHPVVTKSISSGLIGLLGDLLAQSVESAVSG--APAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASF 181
            + L+K P++ K  +S L+G LGD+++Q V  A+ G  A A W    AV +S AV IDGF ++ PLLH AY AL+  +PA ES   A+ QV    VDV V+DP+F  +F+ +TGL+EGRS + EI+ T++ DY T+V WL+ IGL  APLQ+Y FNR+PV++RVL +D +D++WT VA F
Sbjct:   87 EELEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVL---VDVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACF 262          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A6H5L428_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L428_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 4.330e-26
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0
Query:   95 VGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQ 162
            +GVDV VIDPVFAF+F+W TGLIEGRSV  EIL T+ H YPT+VLWL+ IG+ WAP+QIYLFNRYPVQ
Sbjct:  651 IGVDVLVIDPVFAFMFIWYTGLIEGRSVQGEILPTIVHHYPTLVLWLVVIGVGWAPVQIYLFNRYPVQ 718          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.020e-26
Identity = 71/185 (38.38%), Postives = 102/185 (55.14%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVE---SAVSGAPAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMP--AGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVL--WLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L + P+V K+++SG++GL GD+ AQ  E    A SG   P+  N    R  AV ID   I GP LH  Y  LE  +P  AG  + AA+  V    +D FV DP+F   F   TG++E RS+   IL  ++ ++   V   WL+++  C  PLQ   F   P+++RVL+ +  D+ WT V S+FSH
Sbjct:  193 LRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTR--RLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVV----IDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFC--PLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSH 369          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 6.380e-25
Identity = 68/184 (36.96%), Postives = 99/184 (53.80%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVE---SAVSGAPAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMPA-GESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVL--WLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L + P+V K+++SG++GL GD+ AQ  E    A SG   P+  N    R  AV ID   I GP LH  Y  LE  +P  G   + A + V    +D FV DP+F   F   TG++E R +   IL  ++ ++   V   WL+++  C  PLQ   F   P+++RVL+ +  D+ WT V S+FSH
Sbjct:  193 LRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNR--RLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVV---IDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFC--PLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSH 369          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 103 bits (256), Expect = 4.710e-24
Identity = 66/190 (34.74%), Postives = 95/190 (50.00%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPW--STNAAVW---------RSCAVMIDGFFINGPLLHYAYKALEDRMPA-GESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L   P++TK++S+  I   GD   Q  E         W  ++N  +          R  AVM+DG FI GP+LH AY+ LE  +P  G   L AV+ V     D F++DP+F   F  +TGL E R +  + L  ++ ++P  +    ++     P+Q   F   PV+YRVL  + IDL WT   SFFSH
Sbjct:   28 LKNAPMLTKALSAAGIAASGDFATQIWEH--------WRETSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAA---DTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSH 206          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 94.0 bits (232), Expect = 7.340e-20
Identity = 60/182 (32.97%), Postives = 93/182 (51.10%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPWSTNA--AVWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDY--PTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L   P++TKSI+S ++G +GD +AQ            W  +   +  R  A M++G   +GPL+H AY   E  +P G ++  A++ V    +D  ++D VF     W TGL+EG S   ++    Q D        WL ++ L   P+++  F   PV YRVL  +++D+VW  V SF SH
Sbjct:   94 LTTQPLLTKSITSAVMGCVGDAVAQR-----------WEHHPIYSKRRGLAAMVEGLLWSGPLMHRAYSLFEHILPVGNNMGFALIHVL---LDSLLLDSVFVTSAFWITGLLEGFSFK-QLRQQYQRDIGGTLKASWLTSLFLL--PVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSH 258          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A7S3DNH3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNH3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 6.890e-19
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPWSTNAA--VWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQ-----VCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L +HP+VTKS+++GL+G  GD +AQ +E          S        R  ++++DG  ++GPL+H+AY+ +E   P   S  A   Q     +  V  D  V+D +F    +W+TGL+EG SV        Q   PT+    +   L   PL++  F   PV +RVL  + IDL+W  V S  +H
Sbjct:  177 LQRHPLVTKSVTAGLLGWGGDSVAQRLEGWKQPPQGRHSRQGRYDARRGGSLLVDGLLLSGPLMHFAYEWMETWWPI-PSATAYWWQGWGIALTHVLADTLVLDSIFVASTLWTTGLLEGYSVRQCWWQFRQDYIPTLKAGGVTSFLV-LPLELACFKCLPVSFRVLAVNFIDLIWDTVISHMAH 359          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.470e-18
Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    7 LDKHPVVTKSISSGLIGLLGDLLAQSVESAV----SGAPAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDY-PTM-VLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            L  +P+VTK I++G+IG LGD LAQS+E+ +    + AP   S      R  + ++ GFFI+GPL+H+AY  L DR+       AA++ V     D   +D +F       TG +EG     +++  ++ DY PT+   W  +I L   P++   F   P+ YRVL  + IDL+W  V SF +H
Sbjct:  183 LSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPR-RGLSTLLYGFFISGPLMHFAYD-LFDRVLPIHGNGAALVHVLA---DSIFLDAIFVAATYIVTGRMEGYKFR-QVMPQLRKDYLPTLKASWATSIFLM--PVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAH 358          
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Match: UPI0018AE4B44 (protein Mpv17-like isoform X2 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE4B44)

HSP 1 Score: 88.6 bits (218), Expect = 6.800e-18
Identity = 56/179 (31.28%), Postives = 91/179 (50.84%), Query Frame = 0
Query:    6 ALDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPWSTNAAVWRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVFVIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAPLQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSH 184
            ALDKHPV+TKSI+S L+ L+GDL+ Q +    S           + RS      GF + GP LH+ Y +L   +    S  A V  +    +D F+  P+F  +F+    ++EGR    +++  ++ ++P+    ++A    W P Q  +F   P Q++VL  D + L W  + SF +H
Sbjct:  115 ALDKHPVLTKSITSALLTLIGDLICQLMIEQAS--------KLDLKRSLIFTTLGFVLVGPTLHFWYLSLSKLVTTTGSSGAFVCLL----LDQFLFSPIFIGVFLSLVVILEGRP--SQVVPKLKQEWPSS---MVANWQLWIPFQFLIFRFVPQQFQVLATDFVALAWNAILSFKAH 276          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1809.5202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD9_ECTSI1.520e-9374.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMD8_ECTSI6.340e-5049.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L428_9PHAE4.330e-2675.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JK43_9PHAE7.020e-2638.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRI6_ECTSI6.380e-2536.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XMM5_HETAK4.710e-2434.74Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Z5JHC7_FISSO7.340e-2032.97Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S3DNH3_9STRA6.890e-1933.51Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3LFT8_9STRA4.470e-1835.87Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
UPI0018AE4B446.800e-1831.28protein Mpv17-like isoform X2 n=2 Tax=Dioscorea ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 115..180
e-value: 2.3E-12
score: 47.0
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 5..184
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 5..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 157..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..156
NoneNo IPR availableTMHMMTMhelixcoord: 137..156
NoneNo IPR availableTMHMMTMhelixcoord: 95..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1809contigL-elsbetiae_contig1809:17019..22462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1809.5202.1mRNA_L-elsbetiae_contig1809.5202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1809 17019..22462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1809.5202.1 ID=prot_L-elsbetiae_contig1809.5202.1|Name=mRNA_L-elsbetiae_contig1809.5202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp
NARTDALDKHPVVTKSISSGLIGLLGDLLAQSVESAVSGAPAPWSTNAAV
WRSCAVMIDGFFINGPLLHYAYKALEDRMPAGESILAAVMQVCTVGVDVF
VIDPVFAFIFVWSTGLIEGRSVNDEILHTVQHDYPTMVLWLIAIGLCWAP
LQIYLFNRYPVQYRVLTADLIDLVWTCVASFFSHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22