prot_L-elsbetiae_contig18.5156.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig18.5156.1
Unique Name	prot_L-elsbetiae_contig18.5156.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	285

Homology

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BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 5.810e-73
Identity = 150/254 (59.06%), Postives = 184/254 (72.44%), Query Frame = 0

Query:    1 MASTLGILDVLGRLREESERASTALAAQEDTNRSLLHRCTEAEAESGRTVAVKDALHKQKTRLDEGRMVAECKRQEVESRFKRLQAQQAGREHAAACRRQAAVAAADDAVESSRRFRADAAASVRQIRELRARLQDKRVELESVREKKNELDEEIKAKKTTRDKINAEVASQAEAIATACSAVEDTELENKATLAKAKQTEGEARSTHKKLVEETRQARQEMQEMAAGLQKKNAILRNELRHLKRQVGGDGSVQ 254
            MASTLG+LDVL +LREESERASTAL AQ++TNR+LL +C EAE ESGRT   K+AL  +K +L++G   AE  R+E E R +RLQ QQA R+ AAA  R+   AA   AV  S+RFRADA   VRQI ELRARL+DKR ELES  E K ELD EI  KK TRD + AEV SQ EA+A +CS V+D + ENK+ LA+AK+ EGE        ++E R+A++EMQEMA GLQ+KNAILR+ELRHLKR++ G    Q
Sbjct:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGE--------IDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQ 246

[Close]

BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.170e-22
Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 0

Query:  143 SVREKKNELDEEIKAKKTTRDKINAEVASQAEAIATACSAVEDTELENKATLAKAKQTEGEARSTHKKLVEETRQARQEMQEMAAGLQKKNAILRNELRHLKRQVGGD 250
            S  E+K ELD EI  KK TRDK+ AEVAS+ EA+ T+CS V+D + ENK+ LA+AK+ EGE        ++E R+A++EMQEMA GLQ+KNAILR+ELR+LKR++ GD
Sbjct:   21 SAEEEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGE--------IDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGD 120

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig18.5156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1F2_ECTSI	5.810e-73	59.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAN2_9PHAE	1.170e-22	57.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	COILS	Coil	Coil	coord: 212..246
None	No IPR available	COILS	Coil	Coil	coord: 11..45
None	No IPR available	COILS	Coil	Coil	coord: 120..168
None	No IPR available	COILS	Coil	Coil	coord: 67..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig18	contig	L-elsbetiae_contig18:76207..81098 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig18.5156.1	mRNA_L-elsbetiae_contig18.5156.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig18 76207..81098 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig18.5156.1 ID=prot_L-elsbetiae_contig18.5156.1|Name=mRNA_L-elsbetiae_contig18.5156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
MASTLGILDVLGRLREESERASTALAAQEDTNRSLLHRCTEAEAESGRTV
AVKDALHKQKTRLDEGRMVAECKRQEVESRFKRLQAQQAGREHAAACRRQ
AAVAAADDAVESSRRFRADAAASVRQIRELRARLQDKRVELESVREKKNE
LDEEIKAKKTTRDKINAEVASQAEAIATACSAVEDTELENKATLAKAKQT
EGEARSTHKKLVEETRQARQEMQEMAAGLQKKNAILRNELRHLKRQVGGD
GSVQEQQRNHEGPLGGNDCQKKDGNGMHRAGIGRS