prot_L-elsbetiae_contig18.5155.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18.5155.1
Unique Nameprot_L-elsbetiae_contig18.5155.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length512
Homology
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 626 bits (1615), Expect = 2.000e-220
Identity = 343/490 (70.00%), Postives = 397/490 (81.02%), Query Frame = 0
Query:   14 AAGLGLVVACAGLG-QT-SATSIRLTECPADAPKATFRWVN-GDQLYVEGAGSCVTLPDIFNGADNAPLVYHTPAGAESATETGIWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQIEAAGGSIKEC 500
            AAGL L +  AG   QT SA SIRLTECPADAP+ATF W N GD LYVEG GSCVTLPDI+NG DN PL YHT  G ES TETGIWL+TK ++M  GTTLLLHDDLGCTELR+ SSS++  HL   G Y+S+L TKVTSWSVS   PD G  DGSNPRSY+S +SE+ H +D CDGAADDD+GE+R+DIINS++G+LGYQA+E+YGL+YKVRG+C D SN EVFDRVNVRGDIRFSDIHHNWFG Y+YGHQDGLWE+N M + G+YGFDPHDDSDNLRIH+N V+ NGNHGIIASKRC   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGSGSACIA+FESF IE+SDNVC  NEEGIRLSMGSS NKIFDN V +TAGRSLW+Y GSD + ASA   G CT NLF++N L+ A++G + SETR+  +IGNT +  EES  +DSDGLLW DNEV+  F + ++ TC+++ SD DQI A G +  EC
Sbjct:   12 AAGLLLFLLLAGTRVQTGSAGSIRLTECPADAPEATFSWTNDGDYLYVEGDGSCVTLPDIYNGVDNPPLTYHTVDGDESDTETGIWLLTKHLYMRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQISAGGSNPSEC 501          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 1.080e-153
Identity = 264/406 (65.02%), Postives = 300/406 (73.89%), Query Frame = 0
Query:   95 IWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQIEAAGGSIKEC 500
            IWLMTK+IFMESGTTLLLHDDLGC                            +TSWSV   APDNG  DG N RS+IS +SE+ H +D CDGAADDD+GE+RMDIINSE+ +LGYQASE+YG+SYKVRG+C D SN EVFDRVNVRGDIRFSDIHHNWFG                     YGFDPHDDSDNLRIH+N V+ NGNHGIIASKRCNDV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GSGSACIA+FESFDIE+SDN+C  NEEGIRLSMGSS NKIFDN V +TAGRS+WMY GSD VEASA   G CT NLF++N LE +  G  M+ETR+T +IGNTFIDT+ + ++DSDGL+W DN +D  F M    TC+ + SD DQI   G +  EC
Sbjct:    3 IWLMTKNIFMESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQINGVGSNPSEC 362          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 4.550e-103
Identity = 230/497 (46.28%), Postives = 314/497 (63.18%), Query Frame = 0
Query:   13 RAAGLGLVVACAGLGQTSATSIRLTECPADAPKATFRW-VNGDQLYVEGAGSCVTLPDIFNG--------------ADNAPLVYHTPA---GAESATETGIWLMTKDIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQI 490
            RAA +GLV A A  G   AT     +   +A KA+ R+ +  D+LY+EG G C+T  DI+                A+ A  +  TP    G  S  ETG WL T D+++  G  L LH + G T +RLKS S     LR +G +LSLL T+++SW V +    +  S+ S PRSY++ +SEV+ S  + C G A +D+GE+R DIINSE+ HLG+  +EAYG+++KVRGFC D SN ++FDRVNVRGDIRFSDIHHN+FG+YTYGHQDGLWE+NLMH+   YGFDPHDDSDNLRIH+N VW                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        A+FES + + S+N C  N+ G R S+G+S+NKI+DN V ++    ++MY+GSD    S    G  + N+  +N +++AT G +M +T   +  GN   +T +  F +S  ++W DN++ +G  +D + +C  ++SD+ Q+
Sbjct:    7 RAAAVGLVAAAAAAGL--ATLGEACDYTLEA-KASLRFNIETDRLYLEGGG-CITPSDIYLAKLTNVTEDDGNTLTAEEAAAIPITPITKDGEFSDAETGYWLFTSDVYIYDGVKLELHAESGTTGMRLKSDSKV-IELRAHGGWLSLLNTELSSWDVDE---ADYASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQL 492          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 7.150e-98
Identity = 188/425 (44.24%), Postives = 238/425 (56.00%), Query Frame = 0
Query:   55 QLYVEGA-----GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDN 466
            +LY+E A     G CVTL  I+    D +PL    P +G  S + TG WL+T+++++E G TL +H         ELRL S+S  + HLR  G  L  L TKV +W  SKNAPD  +SDG   RSYIS +SEVI      C+G A ++ GE+RMDI NSE+ +LGY  +E YGL++KVRGFC D  N E+FD VNV G+I  SDIHHN FG+YTYGHQ G W  N MHD   YGFDPHDDSD L IHDN VWNNG HGIIASKRCN V                                   +G A +A+ ESF+ +VSDN  + N+ G+RLS+G   N    NV+T +A  + + Y G+D  E      GR  +N+F +N +        + E   TQ I NTF D     F D+   L   N
Sbjct:   26 RLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVV--DSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.460e-96
Identity = 180/406 (44.33%), Postives = 241/406 (59.36%), Query Frame = 0
Query:   55 QLYVEGA-----GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLH--DDLG-CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTF 447
            +LY+E A     G C TL  I+   A  APL    P +G  S TETG WL+T+++++E G TL ++  D+ G   ELRL S+S  + +LR +G  L  + TKV SW  S N+PD  ++DG   RSYIS +SE++   D+ C+G A +  GE+RMDI NSEIG+LG+Q SE+YGL++KVRGFC D SN E+FD VNV G++  SDIHH  FGLYTYGHQ G W  N MHD   YGFDPHDDSD L IHDN V+NNG HGIIASKRCN V                                   +G A +A+ ESF+ +VS+N  + N+ G+R+S+G ++N   +N+++N +  + + Y GSD  E      GR  NN+F  N    A    ++ E   TQ + N F
Sbjct:   59 RLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSD--EPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 459          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 8.180e-94
Identity = 190/426 (44.60%), Postives = 253/426 (59.39%), Query Frame = 0
Query:   54 DQLYVEGA-----GSCVTLPDIF-NGADNAPL-VYHTPAGAESATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSG--SACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDN 466
            ++LY+E A     G CVTL  I+ +    APL    + +G  S + TG WL+T+++F+E G TL +H         ELRL S+S  + +LR +G  L  L TKV +W  S N PD  + DG   RSY+S +SEVI   +  C+G A ++ GE+RMDI +SE+G+LGY  SE+YGL++KVRGFC D SN ++F+ VNV G+I  SDIHHN FG+YTYGHQ G W  N MHD   YGFDPHDDSD L IHDN V++NG HGIIASKRCN V                     XXXXXXXXXX       A +A+ ESF+ +VSDN+ + N+ GIR S+GS  N  F+NV++ +   S + Y GSD  +      GR  +N+F++N +       ++ +   TQ I NTF D     F D+   L   N
Sbjct:   51 ERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVV--DSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 1.160e-92
Identity = 177/407 (43.49%), Postives = 236/407 (57.99%), Query Frame = 0
Query:   55 QLYVEGA------GSCVTLPDIFNG-ADNAPLVYHTP-AGAESATETGIWLMTKDIFMESGTTLLLH-DDLG--CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADK-CDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTF 447
            +LY+E A      G CVTL  I+   A   PL    P +G  S + TG WL+T+++++E G TL ++  + G    ELRL S++  + +LR +G  L  + TKV SW  S N+PD  ++DG   RSYIS +SE+I   D+ C+G A +  GE+RMDI +SEIG+LGY  SE+YGL++KVRGFC D SN EVFD VNV G++  SDIHH  FGLYTYGHQ G W  N MHD   YGFDPHDDSD L IHDN V+NNG HGIIASKRCN V                                   +G A +A+ ESF+ +VS+N  + N+ G+R S+G ++N   +N ++N A  + + Y G+D  E      GR  NN+F  N    A    ++ E   TQ + N F
Sbjct:   54 RLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTD--EPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 294 bits (752), Expect = 3.060e-90
Identity = 193/446 (43.27%), Postives = 258/446 (57.85%), Query Frame = 0
Query:   55 QLYVEGA-----GSCVTLPDIFNGADN-APLVYHTPAGAE-SATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDL-DKTCINANSD 486
            +LY+E A     G CVTL DI+   D  APL    P+  + S++ TG WL+T+ +++E G TL +H         ELRL S+S D+ +LR +G  L  + TKV +W  SKN     ++D S  RSYIS +SEVI  S  KCDG A  + GE+RMDI +SE+ +LGY  SE+YGL++KVRG C D SNLEVFD VNV G+I  SDIHHN+FG+YTYGH+ G W  N MH    YGFDPHDDSD L IHDN V+NNGNHGIIASKRCN  XXXXXXXXX                          +G A +AL E+F+ +VS+N  + N+ GIR+S+G ++N    N +T ++  +++ Y+GSD         GR  +               +++    T+ I NTF   +   FED  G L   N    G ++ + D +C +  SD
Sbjct:   52 RLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV---RTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVV--DSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD 492          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 2.340e-88
Identity = 173/423 (40.90%), Postives = 234/423 (55.32%), Query Frame = 0
Query:   62 GSCVTLPDIF-------NGADNAPLVY---HTPAGAESATETGIWLMTKDIFMESGTTLLLHDD-LG--CTELRLKSSS-SDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--GSGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEV 468
            G C TL D++       NG    P+     +      + T TG WL+T D+F+  G TL      +G  C ELR++S+S SD+  +RG+G  L    T VTSW V    P     DG   RS+I  +SEV+   D C   A ++ GE RMDII+SE+G+LGY ASEAYG+++KVRGFC D SN +VFD VNV GD++ SDIHH ++G+Y++GHQ G+W +NLMHD   YGFDPHDDSD L I  N V+NN NHGIIASKRCN+V                               T    G A IA+ E+   ++ DN  DG E GIR+ +GSSNNK+ DNV  N     ++ Y GSD         GR  +N F +N +++   G ++ E+    +  N F  T E  F ++  ++W  N +
Sbjct:    9 GGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSI 422          
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 1.220e-86
Identity = 187/459 (40.74%), Postives = 261/459 (56.86%), Query Frame = 0
Query:   45 KATFRW-VNGDQLYVEGA-----GSCVTLPDIFNGAD-NAPLVYHTPAGAE-SATETGIWLMTKDIFMESGTTLLLHDDLG---CTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSWSVSKNAPDNGKSDGSNPRSYISVLSEVI-HSADKCDGAADDDSGESRMDIINSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHHNWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNHGIIASKRCNDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG--SGSACIALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYKGSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDTEESTFEDSDGLLWMDNEVDSGFAMDLDK-TCINANSDMD 488
            K + R+  +  +LY+E A     G CVTL +I+   D +APL    P+  + S++ TG WL+T+D+++E G TL +H         ELRL S+S D+ +LR +G  L  + TKV +W  SKN     ++DGS  RSYIS +SE+I  S +KCDG A    GE+RMDI +SE+ +LGYQ SE+YGL++KVRGFC DGSN EVFD VNV G+I  SDIHHN FG+YTYGH+ G W  N MH    YGFDPHDDSD L IHDN V                 XXXXXXXXX                          +G A +AL ESF+ +VS+N  + N+ G+RLS+G ++N    NV+++++  +++ Y+GSD  +      GR  +N+F DN +       +++    T+ I NTF   + + FED++  L   N       + + K  C +  SD D
Sbjct:   44 KVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKV---RTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSD--DPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSD 497          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18.5155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G1_ECTSI2.000e-22070.00Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G2_ECTSI1.080e-15365.02Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K9I9_9PHAE4.550e-10346.28MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ8_9PHAE7.150e-9844.24Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI2.460e-9644.33Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE8.180e-9444.60Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7G339_ECTSI1.160e-9243.49Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA3.060e-9043.27Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FRR8_ECTSI2.340e-8840.90Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE1.220e-8640.74Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 378..400
e-value: 1300.0
score: 6.3
coord: 437..465
e-value: 8800.0
score: 0.5
coord: 355..376
e-value: 1300.0
score: 6.5
coord: 308..330
e-value: 7.3
score: 15.5
coord: 284..306
e-value: 1.4
score: 17.9
coord: 332..354
e-value: 39.0
score: 13.1
coord: 238..259
e-value: 4500.0
score: 2.6
coord: 415..436
e-value: 1400.0
score: 6.2
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 41..423
e-value: 8.6E-91
score: 306.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 241..342
e-value: 9.3E-14
score: 51.6
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 307..346
e-value: 2.4E-7
score: 28.3
coord: 350..391
e-value: 7.2E-6
score: 23.6
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 258..350
coord: 285..447
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 258..350
coord: 285..447
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..511
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.674
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 94..449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18contigL-elsbetiae_contig18:62887..71115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18.5155.1mRNA_L-elsbetiae_contig18.5155.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18 62665..72477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18.5155.1 ID=prot_L-elsbetiae_contig18.5155.1|Name=mRNA_L-elsbetiae_contig18.5155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=512bp
MARPGRPQGCLLRAAGLGLVVACAGLGQTSATSIRLTECPADAPKATFRW
VNGDQLYVEGAGSCVTLPDIFNGADNAPLVYHTPAGAESATETGIWLMTK
DIFMESGTTLLLHDDLGCTELRLKSSSSDWTHLRGNGAYLSLLRTKVTSW
SVSKNAPDNGKSDGSNPRSYISVLSEVIHSADKCDGAADDDSGESRMDII
NSEIGHLGYQASEAYGLSYKVRGFCPDGSNLEVFDRVNVRGDIRFSDIHH
NWFGLYTYGHQDGLWEHNLMHDCGFYGFDPHDDSDNLRIHDNTVWNNGNH
GIIASKRCNDVSIQNNVVFDNKLHGIMLHRSSDAGIIRNNTVTGSGSACI
ALFESFDIEVSDNVCDGNEEGIRLSMGSSNNKIFDNVVTNTAGRSLWMYK
GSDPVEASAEQKGRCTNNLFKDNRLESATLGFRMSETRETQVIGNTFIDT
EESTFEDSDGLLWMDNEVDSGFAMDLDKTCINANSDMDQIEAAGGSIKEC
EELEATQAPTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence