prot_L-elsbetiae_contig18.5153.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig18.5153.1
Unique Name	prot_L-elsbetiae_contig18.5153.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	326

Homology

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BLAST of mRNA_L-elsbetiae_contig18.5153.1 vs. uniprot
Match: A0A6H5KXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU8_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 8.150e-132
Identity = 229/406 (56.40%), Postives = 258/406 (63.55%), Query Frame = 0

Query:    1 MTPNRMVAFVGGLSLLQGASAWLSVAPKAVSTGGARTS-------------------SQLRAAAGDEG----GRPDLVSMKRSFESSMDSKLIMEYVTELRTRKALLTSSLEKSRGIITDEIYPIMEELALVNPSSGAGAGGDKGKSHYCAMLRGHWIAASTVVPNVPFVYELGEKAGSSYGTPDGDGPTCTLGELVSVVSGGKXXXXXXXDSATAEYDDATPVRPFRARISALANTVKDGEMPTVVAVAGFAPAAGAK-----------------------------------------------SAGVAT-----------TDDGAVRGRGKWAVMGGYHLRWDFGTLNLDLGGDRIVKADGTGGGAGRDVYEFFLDQNMMILAWKDAPKKEDAVVFVRDEVPR 325
            M  +R +A V G+ LL G SAWL  +P  VST  A                      S LR+ A  EG    GRPDL SMKRSFE +MD+KLIMEYVTELR+RKALL SSLE++ G+ITD+IYPIMEELALVNPSSG G G D+GKSHYCAML GHWIAAST+VPNVPFVY  GEK+ +   +  G GPTCTLGELVS +SG              EY+  TPVRP RARISAL NTVKDGEMPTVVAVAGF+PAA A+                                                AGV T           T+DGAVRGRGKW V GGYHLRW+F T+NLDLGGD+IVKA G GG  GRD+YEFFLDQNM+I+AWKD+PKKEDAVVFVRDEVPR
Sbjct:    1 MVSSRTLAVVCGVDLLHGVSAWLP-SPLRVSTSTATDQRWAVRDIVAGEHRDVRQQWSALRSVADGEGDGGAGRPDLASMKRSFEGTMDNKLIMEYVTELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDQGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKSTNRSPSSRGAGPTCTLGELVSSISG------RPVTGGQLEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVRTEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDSPKKEDAVVFVRDEVPR 399

[Close]

BLAST of mRNA_L-elsbetiae_contig18.5153.1 vs. uniprot
Match: D7G1F7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F7_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 2.460e-118
Identity = 193/321 (60.12%), Postives = 213/321 (66.36%), Query Frame = 0

Query:   65 MDSKLIMEYVTELRTRKALLTSSLEKSRGIITDEIYPIMEELALVNPSSGAGAGGDKGKSHYCAMLRGHWIAASTVVPNVPFVYELGEKAGSSYGTPDGDGPTCTLGELVSVVSGGKXXXXXXXDSATAEYDDATPVRPFRARISALANTVKDGEMPTVVAVAGFAPAAGAKS------------------------------------------------------------AGVATTDDGAVRGRGKWAVMGGYHLRWDFGTLNLDLGGDRIVKADGTGGGAGRDVYEFFLDQNMMILAWKDAPKKEDAVVFVRDEVPR 325
            MD+KLIMEYV ELR+RKALL SSLE++ G+ITD+IYPIMEELALVNPSSG G G D GKSHYCAML GHWIAAST+VPNVPFVY  GEKA +   +  G GPTCTLGELVS +SG              EY+  TPVRP RARISAL NTVKDGEMPTVVAVAGF+PAA A+                                                             A V  T+DGAVRGRGKW V GGYHLRW+F T+NLDLGGD+IVKA G GG  GRD+YEFFLDQNM+I+AWKDAPKKEDAVVFVRDEVPR
Sbjct:    1 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISG------RPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXKDAQAKALAXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVTGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 315

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig18.5153.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig18.5153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KXU8_9PHAE	8.150e-132	56.40	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1F7_ECTSI	2.460e-118	60.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..325
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.745

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig18	contig	L-elsbetiae_contig18:24524..33344 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig18.5153.1	mRNA_L-elsbetiae_contig18.5153.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig18 24524..33344 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig18.5153.1 ID=prot_L-elsbetiae_contig18.5153.1|Name=mRNA_L-elsbetiae_contig18.5153.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp
MTPNRMVAFVGGLSLLQGASAWLSVAPKAVSTGGARTSSQLRAAAGDEGG
RPDLVSMKRSFESSMDSKLIMEYVTELRTRKALLTSSLEKSRGIITDEIY
PIMEELALVNPSSGAGAGGDKGKSHYCAMLRGHWIAASTVVPNVPFVYEL
GEKAGSSYGTPDGDGPTCTLGELVSVVSGGKGGAGGTGDSATAEYDDATP
VRPFRARISALANTVKDGEMPTVVAVAGFAPAAGAKSAGVATTDDGAVRG
RGKWAVMGGYHLRWDFGTLNLDLGGDRIVKADGTGGGAGRDVYEFFLDQN
MMILAWKDAPKKEDAVVFVRDEVPR*