Homology
BLAST of mRNA_L-elsbetiae_contig1795.5136.1 vs. uniprot
Match: D7FK60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK60_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.240e-40 Identity = 299/548 (54.56%), Postives = 324/548 (59.12%), Query Frame = 0 Query: 67 RPAEDGKRYVREVSRLGAEGNWRGVLSLLSMAEGDGTVVNRIMYNATIAALSKSMRWQEAIAVLDRMGAKDVISFSSAM----DACRAA--GKPAEAYQLLSRMVTRREG--VKPNTWCFNTVLSAFAKQGQYRRALSLVEVDMPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASRGGEWELAFGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMREAGTGTPPNAWHFNICVDAHVKSGEWEKGLDLLRNDMPAAXXXXXXXXXXXXXXXXXXXXXXXVALALWDEM-ASLPLG--RNEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSVMAAFQGREV----------GARELDVVLDLVEEMKERGVPPTNHSHSVAIALCAAAGRHELAMRLFXXXXXXXXXXXXXXXXXXXGSCARSSGVGGXXXXXXGHWKTAXXXXXXXXXXXXXXXXXXXXXXXXACCDG 593
RPAEDGKR+VR RLG +G W VLSLL AEGDG VVN IMYNA I ALSKS +ACRAA G+P EAY +LSRM R G VKPN CFNTVL+AFAK G+ R+ALSLVE DM A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEWELAFGL XXXXXXXXXXXXXXXXXXXXXXXXXXX M+E G+ P + LLR DMPAA X XXXXXXXXXXXXXXXX ALWDE A+LP + XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX +TS +AAF+G + G REL + L L+EEMK RG+PPT+ SHS AI LC A +HE A+ LF SCAR SG G G W+TA ACC+G
Sbjct: 90 RPAEDGKRFVRVAQRLGGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACRAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSGRSRQALSLVEEDMVNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEWELAFGLLEDMGXXXXXXXXXXXXXXXXXXXXXXXXXXXPALLRAMKEGGSTAPXXXXXXXXXXXXXXXXXXXXXXVSLLRKDMPAAGVAXDVTXXXXXXXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLPPNLRSXXXXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAXXXXXXXXXGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGE--GRWETAVALLDEMEASGVAPSVATFNGAIRACCNG 635
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1795.5136.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match Name | E-value | Identity | Description | |
D7FK60_ECTSI | 2.240e-40 | 54.56 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 478..627 e-value: 8.5E-34 score: 119.3 coord: 315..477 e-value: 2.4E-35 score: 124.4 |
IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 201..314 e-value: 5.7E-25 score: 90.5 coord: 72..200 e-value: 3.6E-22 score: 81.3 |
IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 357..381 e-value: 2.1E-4 score: 19.2 coord: 428..460 e-value: 4.8E-4 score: 18.1 coord: 213..247 e-value: 6.2E-5 score: 20.9 coord: 391..424 e-value: 5.0E-4 score: 18.1 coord: 322..355 e-value: 7.8E-5 score: 20.6 coord: 177..210 e-value: 3.5E-4 score: 18.5 |
IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 357..382 e-value: 0.0022 score: 18.1 coord: 321..343 e-value: 0.41 score: 11.0 coord: 391..413 e-value: 0.018 score: 15.3 coord: 108..136 e-value: 0.013 score: 15.7 coord: 139..167 e-value: 0.094 score: 13.0 |
IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 423..470 e-value: 4.3E-7 score: 30.0 coord: 173..221 e-value: 6.6E-9 score: 35.8 |
IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 233..294 e-value: 3.1E-9 score: 36.8 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 106..140 score: 9.01 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 498..532 score: 9.219 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 354..388 score: 8.484 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 281..315 score: 7.136 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 579..613 score: 9.909 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 544..578 score: 5.536 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 389..423 score: 9.832 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 174..209 score: 10.26 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 246..280 score: 8.846 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 318..353 score: 9.58 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 459..497 score: 9.734 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 424..458 score: 10.578 |
IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 210..245 score: 10.918 |
IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 483..623 e-value: 4.8E-7 score: 29.4 |
None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 559..625 coord: 284..469 coord: 136..342 coord: 85..198 coord: 479..542 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig1795.5136.1 ID=prot_L-elsbetiae_contig1795.5136.1|Name=mRNA_L-elsbetiae_contig1795.5136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=629bp MATQASRRVFHSRLWQRGVGAQLLLQQPTTPRRPQRPPPPVLRSNNSTST LPKVGDLAEPKSGRKFRPAEDGKRYVREVSRLGAEGNWRGVLSLLSMAEG DGTVVNRIMYNATIAALSKSMRWQEAIAVLDRMGAKDVISFSSAMDACRA AGKPAEAYQLLSRMVTRREGVKPNTWCFNTVLSAFAKQGQYRRALSLVEV DMPRAGVMPNLRTWSTLLDACREAGETGQQAVSLLSRMKNAGLKPDIWCF NHCLNAASRGGEWELAFGLLEDMGKAEVRPNSWSYSAAMKACVNAKEYQM VPALLDGMREAGTGTPPNAWHFNICVDAHVKSGEWEKGLDLLRNDMPAAG VPPDITSYSSCMDAAGKAGEWEVALALWDEMASLPLGRNEVAYNVAIDVC GKAGLVDRALALLAGSRTAGFPPNLIALNSAIDACARAGQPQNALAVFRD IGRTGLRPDAVSYTSVMAAFQGREVGARELDVVLDLVEEMKERGVPPTNH SHSVAIALCAAAGRHELAMRLFEELKRAGQAPNEAVFNAAIGSCARSSGV GGGGGGGGGHWKTALRLLDEMEASGVAPNLTAFNRAIRACCDGGRWALGY SLLDRMGLEGVDPDVSSMNALIRGLRPR* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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