prot_L-elsbetiae_contig179.5110.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig179.5110.1
Unique Nameprot_L-elsbetiae_contig179.5110.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1340
Homology
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: D8LC88_ECTSI (RNA-dependent RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC88_ECTSI)

HSP 1 Score: 1167 bits (3020), Expect = 0.000e+0
Identity = 683/1230 (55.53%), Postives = 784/1230 (63.74%), Query Frame = 0
Query:  161 MGTARGFKCGGFQLCAEWPPGELTCLWAVQSDVTFQVYKKGVSHSPYSLASLMFKEDSGMPGQADFKRRHVDGEVELAKDAGRAWLVLRLLRPPFLHGREQLKDTALSASTYNLASLGALLAMNATGDVFRGGSVWELDDSEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLFRQLHAFRLCTSSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRTGIAAILGG-----GNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXAS-------IRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPAGTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQE--FPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERFGGRMLKRTKLEDAQGRLNTEFAQ------ARRRETRENFMCMNRHDEPEQIKAKYRAKFQDHV-------------------------HDXXXXXXXXXXFEEQYEEGEEALFDEGDEEHGGRQSDDPLLRNAPDGMEAYQKASAWYYVSYSDATNPYIAEARS--------------AGVGLNQPHMLYLSFPWICAYQQLCQIKEMSL 1331
            MGTA GF CGG QLC +WPPG+LTCLW V+S VTFQ+ +   S    SLASLMF++D G  GQ +FKRRHVDGEVEL  D GR WL  RLL PP                                               EKL RVG++S N AFGRCLVYR+DVS LLED +ERARLF++L AFRLCT  RPR+D L  P+RV +++SGQPL+GW  +PEY  LPY VKFL+ECLTS+LK DA  ++E+AV LLA A EE ACLAL        RA LE TP +EI +WLEG GP  G    +G      GNVM+PRASVTPLRVVCQPPEQEMS+GVTR+FA +SDRFL VNFVDENMGRL   LS  LA    +        F  RH   L   P  L    S  + +   R  KSQLRGH+CFFY         S       +  WMGDMSGIDVVGKHAARLGQSLSSTTSTVEV P  KKLVPD+ AGPYEFTDGCGMMSE LARE+++VLGHS ++PPPSAFQIRMGGCKGMLAVWPDSVMR V+GR GYKVLVRPSM+KFPS RN+LEVIQYAR+LPCYLNRQFITLL TLGVPD  IEERY AM++TLDKV   M+ DP+EAE ALVRYYN  SG KTGRKQVGPLWEALAMVRAG ++  EPFLQ +L ATR+KAMIDLRHRTRIF+PDASCLLGIVDETG LQPGQ   S         L CR+ + +  +   + T  D            F      PEPSKMSGGDLDGDLY+VVWD DLLPP R  EG AG + D ENG+N+PAMG+EPP+KP     SSG  + ++E   FFL YI+NDNLG IANAHLV AD S  GARC+ECLQLAALHS AVDFPKSG   +         F  EL+V  YPDFM K+D  TY S KLIGRLFR+TP +G  NP  +++Q+  F G FELD SLL  G+E+F  EA+V                             ERFGGRMLKRTKLEDAQGRLN EF +      AR  + R +   + R    EQIKAK                                  H    XXXXXXX        EEA  +       G+ SD     +APDG+E YQKASAWY+VS+S++TNPY+ EAR                G G   P MLYLSF WI AY+QLCQ++ M L
Sbjct:    1 MGTAPGFSCGGLQLCVQWPPGDLTCLWVVKSGVTFQICRTSRSQKRGSLASLMFEDDRGRHGQVNFKRRHVDGEVELTNDGGRTWLAFRLLHPPM---------------------------------------------PEKLGRVGNMSPNVAFGRCLVYRIDVSDLLEDKSERARLFQELFAFRLCTEPRPRQDHLLSPVRVHTYASGQPLNGWDNLPEYSRLPYSVKFLIECLTSSLKIDAFGVNEEAVSLLAMAGEERACLAL--------RARLEDTPSQEILQWLEGYGPYNGAVYGVGEYGKEIGNVMVPRASVTPLRVVCQPPEQEMSNGVTRRFAEHSDRFLGVNFVDENMGRLQ--LSPLLAPSDCWSIGLACTPFGQRHQTFLKVHPALLV---SCVVLSPPVRPRKSQLRGHACFFYAEGGEVDQISESGSEPAVFHWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVPPALKKLVPDKKAGPYEFTDGCGMMSEGLAREVADVLGHSVSQPPPSAFQIRMGGCKGMLAVWPDSVMRSVSGRGGYKVLVRPSMQKFPSERNTLEVIQYARQLPCYLNRQFITLLGTLGVPDKVIEERYSAMVSTLDKVLRTMLSDPAEAEMALVRYYNITSGGKTGRKQVGPLWEALAMVRAGINIRTEPFLQSVLHATRDKAMIDLRHRTRIFVPDASCLLGIVDETGFLQPGQASDS---------LGCRSVNHYTANRASIMTNADR-----------FGQC--TPEPSKMSGGDLDGDLYSVVWDQDLLPPER--EGVAGVQGDSENGFNFPAMGYEPPEKPKTSASSSGKGVDMKEIADFFLKYIQNDNLGKIANAHLVRADLSPLGARCDECLQLAALHSKAVDFPKSGVPAV---------FPDELKVDSYPDFMCKEDNMTYLSKKLIGRLFRDTPPAGAANPQRRQQQDERFLGGFELDQSLLAPGYEDFLEEAEV-----------------------------ERFGGRMLKRTKLEDAQGRLNLEFLRMFMPMHARALDGRGSVWVLPRAYLREQIKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPADQXXXXXXXXXXXXXXKEEARVE-------GKGSDYHPA-DAPDGVEVYQKASAWYFVSHSESTNPYMREAREEWRKKTRRGXXXXXGGHGAEAPLMLYLSFAWISAYEQLCQMRNMRL 1102          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: D8LNY3_ECTSI (RNA-dependent RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY3_ECTSI)

HSP 1 Score: 716 bits (1847), Expect = 1.200e-241
Identity = 424/769 (55.14%), Postives = 479/769 (62.29%), Query Frame = 0
Query:  431 MLGTDPRASLEKTPREEIARWLEGLGPRTGIAAILGG-----GNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPM-PLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXA-SIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPAGTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQE--FPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERFGGRMLKRTKLEDAQGRLNTEFAQA 1190
            ML TDPRA LE TP  EI RWLEG GP  G    +G      GNVM+PRASVTPLRVVCQPPEQEMS+GVTR+FA +SDRFLRVNFVDENMGRL + PL       F  K   ++                      + R    +A +  SQLRGH+CFFY        A SIR WMGDMSGIDVVGKHAARLGQSLSSTTSTVEV P  KKLVPD+ AGPYEFTDGCGMMSE LAR                      GG                             +  FP     ++VIQYAR+LPCYLNRQFITLL TLGVPD  IEERY AM++TLDKV   M+ DP+EAE ALVRYYN  SG KTGRKQVGPLWEALAMVRAG ++  EPFLQ +LRATR+KAMIDLRHRTRIF+PDASCLLGIVDETG LQPGQ   S         L CR+ + +  +   + T  D            F          +MSGGDLDGDLY+VVWD DLLPP R  EG AG + D ENG+N+PAMG+EPP+KP     SSG  + ++E   FFL YI+NDNLG IANAHLV AD S  GARC+ECLQLAALHS AVDFPKSG   +         F  EL+V  YPDFM K+D  TY S KLIGRLFR+TP +G  NP  +++Q+  F G FELD SLL  G+E+F  EA+V                             ERFGGRMLKRTKLEDAQGRLN EFAQA
Sbjct:    1 MLSTDPRARLEDTPSREILRWLEGYGPYNGAVYGVGEYGKETGNVMVPRASVTPLRVVCQPPEQEMSNGVTRRFAEHSDRFLRVNFVDENMGRLQLSPLLVPRLEGF-MKDGLVI----------------------AGRKYEFLAYSG-SQLRGHACFFYAEGDGAPTADSIRSWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVPPALKKLVPDKKAGPYEFTDGCGMMSEGLAR----------------------GG----------------------------DVIPFPHAHTPMQVIQYARQLPCYLNRQFITLLGTLGVPDKVIEERYSAMVSTLDKVLRTMLSDPAEAEMALVRYYNITSGGKTGRKQVGPLWEALAMVRAGINIRTEPFLQSVLRATRDKAMIDLRHRTRIFVPDASCLLGIVDETGLLQPGQASDS---------LGCRSVNHYTANRASIMTNADR-----------FGQC-----TQEMSGGDLDGDLYSVVWDQDLLPPER--EGVAGVQGDSENGFNFPAMGYEPPEKPKTSASSSGKGVDMKEIADFFLKYIQNDNLGKIANAHLVRADLSPFGARCDECLQLAALHSKAVDFPKSGVPAV---------FPDELKVDSYPDFMCKEDNMTYLSKKLIGRLFRDTPPAGAANPQRRQQQDERFLGGFELDQSLLAPGYEDFLEEAEV-----------------------------ERFGGRMLKRTKLEDAQGRLNLEFAQA 630          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: UPI001D1A384C (probable RNA-dependent RNA polymerase SHL2 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI001D1A384C)

HSP 1 Score: 396 bits (1017), Expect = 1.740e-115
Identity = 309/920 (33.59%), Postives = 449/920 (48.80%), Query Frame = 0
Query:  299 DDSEKLERVGDLSANGAFGRCLVYRVDVS--QLLEDTNERARLFRQLHAFRLCTSSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAV-LLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRTGIAAILGGG-------NVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSL------WFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRP-ERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELP--------------AGTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERFGGRMLKRTKLEDAQGRLNTEF 1187
            DD +   R GD + +GA GRC VYR+ +S  +L++     A L +Q  A   C S          PL VR+       D +  V E   L + V FLV  L      +   L  + + LL    D+++   AL    G       +K P  +  R L     R     +LG G        V + R  +TP R  C PPE+E+S+ + R +   +DRFLRV F+DE M     PL+    N  +F  + IL    S   +   T  + +       F    R  +++A  + +QLR  S +F+         SIR WMG  +  +V  KHAAR+GQ  SS+ +TV V+P E  + + D     Y F+DG G +  DLA E++  L     +PPPSA+QIR GG KG++AVW            G ++ +RPSM+KF S  N +EV+ + R  P +LNRQ I LLS++GV D       ++M+  L+K+ +    D   A   + R  +  +  K  R           M+ AGF    EP L+ ML A R+  + DLR ++RIF+P    L+G +DE G L+ GQ +  +  P               GT V+V +NP  HPGD+R+L+ A D+PEL HL+D +VF   G+RP P + SG DLDGD+Y V WD  L+PPR+Q               ++  M + PPK            +   +   FFL  + +DNLGMI+NAH+V AD SE GA  E+C+ LA L +TAVDFPK+G+ V              LR K YPDF+ K+D  +Y+S K++GRL+R+   +   +    +      D   DT L V G  +F   A      Y  ++ +L ++YGV  E + V+G +        +  KL D + RL   +
Sbjct:   58 DDDDPWIRTGDFTRSGAIGRCWVYRIKISPRRLMKMDRALAYLEQQGVAIMECGSCYSG-----LPLTVRAEHP----DFFCCVQEAEGLTFPVLFLVNVLVHKGIINQHQLTPEFLGLLRGSRDDDDNVAALKDFWG-------DKLPVFDACRRLTKALDRVS-PKLLGRGMDACHNHTVGVRRLVITPTRAYCLPPEEELSNRLLRHYHHVADRFLRVTFMDEAME----PLNN---NSLNFYAAPILRELMSDSFKEKTTVQMRVRTVMTKGFQMCGRKYSLLA-FSPNQLRDRSAWFFAEDGNTTVESIRGWMGRFTCRNVA-KHAARMGQCFSSSYATVTVQPHEVNENLADVERNGYTFSDGIGKIVPDLAMEVAQRL-QLTADPPPSAYQIRFGGYKGVIAVWQGD------SDDGIRLSLRPSMKKFDSHHNVIEVLAWTRFQPGFLNRQIIVLLSSMGVSDAVFWRMQKSMVGNLEKIFT----DSEVALETITRSCSPENANKAAR-----------MLSAGFSPRTEPHLRAMLSAIRSAQLHDLREKSRIFVPKGRWLIGCLDELGILKYGQCFIRASAPWLDPCFVKHGPKIIVGT-VVVAKNPCYHPGDVRILE-AVDVPELRHLVDCLVFPQNGERPHPDEASGSDLDGDIYFVTWDEQLIPPRKQ---------------SWKPMDYSPPKVKLLRRE-----VTQNDTVDFFLENMVSDNLGMISNAHVVHADLSEHGAMDEKCIFLAQLAATAVDFPKTGKFV---------AMPCHLRPKIYPDFLLKEDSKSYKSEKILGRLYRSIQEASGADWVSHEAWTLH-DLPYDTCLEVTGASDFLVSAWQCKCLYDRQLNALLNQYGVRTEAELVTGHIWSIPRNNCR--KLVDVKDRLKNAY 895          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: K3YLC2_SETIT (RNA-dependent RNA polymerase n=5 Tax=Setaria TaxID=4554 RepID=K3YLC2_SETIT)

HSP 1 Score: 396 bits (1018), Expect = 8.950e-114
Identity = 308/939 (32.80%), Postives = 458/939 (48.78%), Query Frame = 0
Query:  299 DDSEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLF--RQLHAFRLCTSSRPREDRLRFPLRVRSHSS-GQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRT----------GIAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCP------LSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPER-KKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPA-----------------------GTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGY--FFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERFGGRMLKRT-----KLEDAQGRLNTEF 1187
            DD +   R  D++ +GA  RC VYRV          + A  +  RQ      C       D  R  L V    + GQP +      E   L + V FLV  L      +   L  +   LL + D++    AL+ +LG       EK     + R L+    R           G   + G  N ++    +TP R  C PP+ E+S+ V R + R +DRFLRV F+DE M     PL+    N  +F  + I+    S  P+   T        L+  F    R  + +A ++ +QLR  S +F+        ASIR+WMG     +V  KHAAR+GQ  +ST +TV ++P+   + + D     Y F+DG G ++  LA E++  L    N PP SA+QIR  G KG+LAVWP           G ++ +RPSM KF S    LEV+ + +  P YLNRQ ITLL++LGVPD    +  EAML  LD++ S    D   A       Y  ++   +    +  L     M+ AGF    EP L+ ML A R+  +  L  +T+IF+P    L+G +DE G L+ GQ +  + +P+                       GT +++ +NP LHPGD+R+L+ A D+PEL HL+D +VF  KG RP P++ SG DLDGD+Y V WD +L+PPR++               ++P M + P +              VR++    FFL  + ++ LG+I+NAH+V AD+S+ GA  ++C+QLA L +TAVDFPK+G+ V   + PP       LR ++YPDFM K+D  +Y+S K++G+L+R+  +    N           D   DT L V G   F  +A      Y  ++  L ++YGV  E + V+G++     R  K+      +L+ A  +L+ EF
Sbjct:  286 DDDDPWIRTTDITPSGAIARCWVYRVSFRAWCWPKMKDALAYMKRQEVPVVFC-------DIGRRGLNVNDEPAFGQPTEDLFFCVEREGLRFPVLFLVNVLVHKGIVNEHQLTSEFFGLLEKEDDDVNVAALTELLG-------EKLQVFYLCRRLKNAQDRAAKNNRLLHLHGSKKVTGDHNAVVRSMMITPTRAYCLPPQVELSNRVIRHYHRVADRFLRVTFMDEGM----QPLNI---NALNFCVAPIVKDMMSNSPQQKTTVHRRVQTILTKGFCMCGRKYSFLAFSS-NQLRKRSAWFFAEDGTTSTASIRQWMGQFPSNNVA-KHAARMGQCFTSTYATVTMQPDEVNEFLEDVKRNGYNFSDGIGKITPGLAMEVAKRLPLMHNYPP-SAYQIRYAGFKGVLAVWPGK-------NDGIQISLRPSMRKFESTHLVLEVVSWTKFQPAYLNRQIITLLTSLGVPDAIFWQMQEAMLHNLDRILS----DRDVA-------YQVVTNCCSEHATIPAL-----MLSAGFTPATEPHLKAMLLAIRSSQLQGLLEKTKIFVPKGRWLMGCLDELGILEQGQCFIRASVPSLNKYFVKHGSRISLANKSAEVIVGT-IVMAKNPCLHPGDVRILE-AVDVPELHHLVDCLVFPKKGKRPHPNEASGSDLDGDVYFVTWDKNLVPPRKK---------------SWPPMDYSPVEAKQLPRR-------VRQHDIVDFFLKNMISEILGLISNAHVVHADYSKYGAMDDKCIQLAELAATAVDFPKTGKMV---TMPPS------LRPQEYPDFMGKEDDISYKSEKILGKLYRSIQQY---NLGRSLEDSIRNDVPYDTKLEVPGASHFLADAWQCKCSYESQLNGLLNQYGVRTEAEVVTGEIYSLTERNKKKKNEIKERLKHAHSKLHQEF 1141          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: A0A167Q545_PHYB8 (RNA-dependent RNA polymerase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167Q545_PHYB8)

HSP 1 Score: 397 bits (1020), Expect = 1.230e-113
Identity = 275/791 (34.77%), Postives = 403/791 (50.95%), Query Frame = 0
Query:  387 PYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRTGIAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNV--LGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPAGTP---------VLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERF 1166
            PY V +++E +  N  FD + LD+    ++ E      C  L  +  +  R      P  E  +  + L  +      +     M+ +  VTP  +  QPP  E ++ V R F  Y+DRF+RV F D+ M R+    SAS        T    N  + R  + L      +  G  +R  + +A  + SQLR H C+F+        + IR WMG  S + +V K+A R+GQ  SST    ++  E  + +PD     Y F+DG GM+S  LARE++    L H P     SAFQ R+ G KG+L V         +G +G KV +RPS  KF S    LEVI+Y+  +P YLN+Q IT+LS LGV D+      + ML TL+     M+ +PSEA   L           +   + G     + M++AGF    +P+   +L   R   + +L+ +T+I +P+ + LLG++DETGSLQ G+V+     P+            ++V RNP  HPGD+RV+  A D P+L HL DVVVFSS+G R  PS  SGGDLDGD Y + WD  LLPP R                NY  M +EP +KP          + +     F++NY+ NDNLG IAN HL  AD + +GA    C +LA LHS+AVDFPKSG   IP   P D      L+V+ +PDFM+KKD+++Y S K++G++FR    S +     + + +     + D  L V G E +  EA+ +   Y  +++SL ++YG+  E +  SG + ++
Sbjct:  328 PYDVLYMLESVILNHYFDEINLDQDFYDMIKELPHSITCGILEIVSNSKKRVW---DPDTEFRKIWDTLRMKVCHKRKIPDHCTMMRKLVVTPTSIYIQPPSLETTNRVIRHFRAYTDRFIRVQFCDDGMNRI----SAS-------HTGLSNNEVYDRIYKVLTN---GIQIG--TRRYDFLA-FSNSQLRDHGCWFFAPTKDMTASMIRDWMGRFSHVKIVAKNATRMGQCFSSTRPICQLNKEDVERIPDVERNGYTFSDGVGMISPALAREVAATMELKHVP-----SAFQFRLAGAKGVLTV--------ASGLTGRKVKLRPSQIKFDSDHLVLEVIRYSTSIPAYLNKQIITILSALGVEDNVFLTLMDDMLKTLNS----MLSNPSEAIKVL----------NSNIDEFGTTQTMIRMIQAGFMDKKDPYTVNLLNMFRVSMLKNLKKKTKINVPEGAFLLGVMDETGSLQEGEVFCQVTEPSAQSSRKRIITGDIVVYRNPCFHPGDVRVVN-AVDCPKLRHLSDVVVFSSQGYRDIPSMCSGGDLDGDDYTIYWDKRLLPPTR----------------NYTPMDYEP-EKPLQVDE-----VHISHILKFYINYMNNDNLGQIANGHLATADMAFDGALNGSCKRLAQLHSSAVDFPKSG---IPAILPDD------LKVRCFPDFMQKKDKESYPSKKVLGKIFRAIDNSDYK----EYKTKLISTTKYDVRLRVKGMERYVLEARTLKANYDRDLLSLMNQYGIQTEAEITSGYIIKW 1035          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: UPI00053C9B9F (RNA-dependent RNA polymerase 6-like isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C9B9F)

HSP 1 Score: 395 bits (1016), Expect = 1.400e-113
Identity = 354/1154 (30.68%), Postives = 521/1154 (45.15%), Query Frame = 0
Query:   66 AKNIVEVYVGNVPHGTEARDLVNYLHGQVLLLL-----SSTAPPAEAP---------ILRCEVFKRRSTFAFVTLRSREVAEALQNCAS---LVFGGRPLRVK-----PPRVAFRKPMGTARGFKCGG--FQLCAEWPPGELTCLWAVQSDVTFQVYK-KGVSHSPYSLASLMFKEDSGMPG--QADFKRRHVDGEVELAKDAGRAWLVLRLLRPPFLHGREQLKDTALSASTYNLASLGALLAMNATGDVFRGGSVWELDDSEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLFRQLHAFRLCTSSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRTGIAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFS---FKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRP-ERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPA--------GTP--------------VLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEF---PGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQV 1163
            A  + +V VG       ARDL  +L  ++ LL      +S  PP   P         I + + +K+ +  AFV     E A    N A    L+  GRPL+V      P  +  R+   T   FK  G   ++       E    W   S V F V     +    ++  +    +D+GM    + DFK      E+ + +                     Q K          LAS   +    A  D++    V  LDD +   R  D + NGA GRCL YRV +S   E+     +L   L   R+    R +E+R+R P R+R        + +  + +   + + + FLV  +      +   L +    LL +  +E    AL   L T  R   +   R ++ +      P+   +       V I R ++TP R  C PPE E+S+ V RK+    DRFLRV F+DE M      +++SL + +     K     +     H        L+  F    R  + +A ++ +QLR  S +F+          I+KWMG  +  +V  K AAR+GQ  SST +TV+V P E    +PD     + F+DG GM++ DLA E+ + L    N PP  AFQIR  GCKG++A WP           G ++ +RPSM KF S   +LE+  + +  P +LNRQ I LLSTLGV D+   +  E M++ L++    M+ D   A   L     T S  + G         A  M+ AGF    EP L+GML + R   +  LR +TRIF+P    L+G +DE G L+ GQ +     P+        G+               V + +NP LHPGD+R+L+ A D+PEL HL D +VF  KG+RP  ++ SG DLDGDLY V WD +L+PP ++              W+ P +     +K      S   +I       FF+  + ND+LG I NAH+V AD SE GA  E+C+ LA L +TAVDFPK+G+ V              L+ K YPDFM K++  +Y+S K++GRL+R        + +     E    P D   DT L + G+ +F  EA      Y  ++M L  +Y V  E + V+G +
Sbjct:   22 ASIVTQVSVGGFGESVTARDLTEFLEEEIGLLWRCRLKTSWTPPGSYPNFDIVDTSRIAKIDDYKKVAPHAFVHFAIPESAAYAMNAAGRCKLILNGRPLKVSLGPENPYSINQRRR--TTTPFKLAGCRVEIGTLVTRDEFLVAWKA-SGVNFLVDPFDNMCRFCFTKDTAFSFKDTGMHAVIKCDFKMEISVREINVVR---------------------QYKHFDGYVVLLQLASCPRVWYRTADDDIYETVPVDLLDDDDPWIRTTDFTPNGAIGRCLSYRVLISPRHEE-----KLKNVLGYLRM---RRVQEERVRLPPRIRREPDFMVPEHFFCIQDKEGISFDIIFLVNAVMHRGTVNQFQLTKHFFDLLRQQPKEVNVAALK-HLCTYKRPVFDACRRFKLVQEWVVKNPKLLESHKKSDDIVEIRRLAITPTRAYCLPPEVELSNRVLRKYTAICDRFLRVTFMDEGM----QTMNSSLLSYYVAPIVKDLISYSASQKTHVFKRVKTILTKGFYLCGRKYSFLAFSS-NQLRDRSAWFFSEDGKTSVLDIKKWMGKFTNKNVA-KCAARMGQCFSSTYATVDVMPHEVDDELPDITRNNFVFSDGIGMITPDLADEVIDKLRLDANCPP-CAFQIRYAGCKGVVARWPSK-------GDGIRLSLRPSMNKFHSKHTTLEICSWTKFQPGFLNRQIIILLSTLGVSDNIFWDMQEVMISKLNQ----MLEDTDVAFEVL-----TASCAEHGNT-------AAIMLSAGFKPKTEPHLRGMLSSVRAAQLWGLREKTRIFVPSGRWLMGCLDEAGVLEQGQCFIQVSTPSIENCFSKHGSRFSETKKNLHIVTGYVAMAKNPCLHPGDVRILE-AVDVPELHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDLNLIPPSKK-------------SWS-PMLYDATEEKTLTRGVSHQDIID------FFVRNMVNDHLGTICNAHVVHADRSEYGALDEDCILLAELAATAVDFPKTGKIVT---------MPHHLKPKLYPDFMGKEEYQSYKSTKILGRLYRKI--KDVYDEDATVSSEINSGPRDIPYDTDLEISGFADFVPEAWNHKCSYDGQLMGLLGQYKVQKEEEIVTGHI 1080          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: K3XDW9_SETIT (RNA-dependent RNA polymerase n=10 Tax=Paniceae TaxID=147428 RepID=K3XDW9_SETIT)

HSP 1 Score: 395 bits (1015), Expect = 2.030e-113
Identity = 312/945 (33.02%), Postives = 454/945 (48.04%), Query Frame = 0
Query:  298 LDDSEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLFRQLHAFRLCTSSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIARWLEGLGPRTG-----IAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLP---MPLSAS------LANRFSFKTSFI--LNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPER-KKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELP-----------------------AGTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQV---ERFGGRMLKRTKLEDAQGRLNTEFAQARRRETRENF 1199
            LDD +   R  D++ +GA GRC VYRV   +      E A  + +     +         R    +R       +  D +  +     L + V FLV  L          L  +   LL   ++E    AL    G       +K P  +  R L+ L  R       +   +G  N  + R  +TP R  C PPE E S+ V R +   +DRFLRV F+DE M +L    +  SA+      ++N F  KT+    + TF            L+  F    R  + +A ++ +QLR  S +F+         SIRKWMG  +  +V  KHAAR+GQ  SST +TV ++P+   + + D     Y F+DG G ++ DLA E++  L  + N  PPSA+QIR  G KG++AVW            G ++ +RPSM KF S    LEV+ + +  P +LNRQ ITLLS+L VPD    +  EAML+ L+ + S    D   A   +     T S  + G         A  M+ AGF    EP L+ ML A R+  ++ L  +TRIF+P    L+G +DE G L+ GQ +  +  P                        GT V++ +NP LHPGD+R+L+ A D+PEL HL+D +VF  KG+RP  ++ SG DLDGDLY V WD  L+PP             G+  WN   M + P +            +   +   FFL  + N+ LG I+NAH+V AD SE GA  E+C+QLA L +TAVDFPK+G+ V   S PP       LR K YPDFM+K +  TY+S K++GRL+R+   +  ++  P++      D   DT + V G  +F   A +    Y  ++ +L ++YGV  E + V+  +    ++  R     K  D + RL   ++ A R+E R  F
Sbjct:  257 LDDDDPWIRTTDITPSGAIGRCGVYRVTFPRRFWPKMEHALAYMRERRVEIVECGGGWGSRRGLSVRDEPEFGERMQDLFFCMQHAEGLKFPVLFLVNALVHKGVITQHHLTPEFFGLLQRREDEVNVAALREFWG-------DKFPVFDACRRLKNLQDRVARNPKLLRNKIGHENSEVRRLVITPTRAYCLPPEVERSNRVIRHYREVADRFLRVTFMDEGMQQLNSNVLNFSAAQIVKDLMSNSFQHKTTVYKRVKTF------------LTEGFHMCGRKYSFLAFSS-NQLRDRSAWFFAEDRTRTVESIRKWMGRFTSKNVA-KHAARMGQCFSSTYATVVMQPDEVNECLEDVERNGYVFSDGIGKITPDLAMEVAKTLQLTDN--PPSAYQIRYAGFKGVIAVWQGE-------NDGIRLSLRPSMHKFESTHTVLEVVSWTKFQPGFLNRQIITLLSSLNVPDAIFSQMQEAMLSNLNNILS----DTDVAFDVV-----TTSCAEQGNT-------AALMLSAGFSPGTEPHLKAMLLAIRSSQLLGLLEKTRIFVPKGRWLMGCLDELGILEQGQCFIQASSPMLNNFLVKHGPKCSSANKNAETIVGT-VVMAKNPCLHPGDVRILE-AVDVPELHHLVDCLVFPKKGERPHANEASGSDLDGDLYFVTWDEKLIPP-------------GKKSWN--PMDYTPAEAKQLPR-----QVSQHDIVDFFLKNMVNEKLGPISNAHVVHADTSEYGAMDEKCIQLAELAATAVDFPKTGKIV---SMPPS------LRPKLYPDFMQKDEAITYKSDKILGRLYRSIQEASSSDLVPEETCTL-NDLPYDTDMEVPGATDFLSSAWLCKCSYEAQLNALLNQYGVRTEAELVTEHIWSLPKYSSR-----KQGDIKERLKNSYS-ALRKELRSTF 1117          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: W8PVI0_SALMI (RNA-dependent RNA polymerase n=1 Tax=Salvia miltiorrhiza TaxID=226208 RepID=W8PVI0_SALMI)

HSP 1 Score: 390 bits (1002), Expect = 1.780e-112
Identity = 274/737 (37.18%), Postives = 388/737 (52.65%), Query Frame = 0
Query:  465 LGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPD----RAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTIS-GKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYF------SSELPAGTP------VLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFEL---DTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQVERFGGRMLKRTKLEDAQG 1181
            L  G V I R  VTP RV    PE  MS+ V R+F+ + D FLRV+F+DE   ++    S  L+ + +   + + N     + R L+T    +  G   +    +A ++ SQLR +S + +          IR+WMGD S I  V K+AARLGQS SS+T T++V     + +PD    R    Y F+DG G +S D AR ++   G     P  SAFQIR GG KG++AV P S M         K+ +R SM K+ S    L+V+ +++  PC++NRQ ITLLSTLGV D   E++    +A LD +    + DP +A+ AL    + +S G+ T   +         M++ G+    EPFL  ML+  R   ++DLR + RIF+P A  ++G +DETG+L+ GQV+       SS L  GT       V V +NP LHPGD+RVL+ A D+PEL H++D VVF  KG RP P++ SG DLDGD Y V WDP+L+PP ++                   M + P              + + E   +F NYI ND+LG+IANAH  FAD   +GA    CL+LA L S AVDFPK+G   IP   PP       LRVK+YPDFM K D+ TY S ++IG+L+R         P+      F  +  +   DT + V G+ E+  EA     EY  ++ ++   YG+  E + +SG + +   +   R K  DA G
Sbjct:  353 LDDGLVYIHRVQVTPTRVYFAGPEVNMSNRVLRQFSAHIDNFLRVSFIDEEWDKM---YSTDLSPKVA---TGVGNGRTKLYERVLSTLRNGITIG--EKRFQFLAFSS-SQLRENSLWMFAPVDGLTADDIRRWMGDFSSIRNVAKYAARLGQSFSSSTETLKVAQYEVERIPDVEVVRDGTTYIFSDGIGKISSDFARRVATKCGIRDGVP--SAFQIRYGGYKGVVAVDPTSSM---------KLSLRKSMLKYQSDNTKLDVLSWSKYQPCFMNRQIITLLSTLGVRDHVFEKKQREAVAQLDDI----LVDPLKAQDAL----DLMSPGENTNILK--------EMLKCGYKPDEEPFLSMMLQTFRLAKLLDLRVKARIFIPQARQMMGCMDETGTLEYGQVFVQFSGTGSSGLYEGTKYTVTGKVAVAKNPCLHPGDVRVLR-AVDVPELQHMVDCVVFPRKGRRPHPNECSGSDLDGDRYFVCWDPELIPPNQE-----------------SPMTYNPAPNTLLDHN-----VTIEEVEEYFTNYIVNDSLGIIANAHTAFADKERDGALSSPCLELAQLFSVAVDFPKTG---IPAEIPP------HLRVKEYPDFMDKPDKTTYTSERIIGKLYRQVKDIA---PHAASLGSFTMEVAMRSYDTDMEVEGFREYIDEAFEFKTEYDYKLGNMMDYYGIKTEAEILSGAIMKTS-KTFDRRKDADAIG 1017          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: A0A2G5DG13_AQUCA (RNA-dependent RNA polymerase n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DG13_AQUCA)

HSP 1 Score: 392 bits (1007), Expect = 1.960e-112
Identity = 353/1187 (29.74%), Postives = 546/1187 (46.00%), Query Frame = 0
Query:   69 IVEVYVGNVPHGTEARDLVNYLHGQVLLLL-----SSTAPPAEAP---------ILRCEVFKRRSTFAFVTLRSREVAEALQNCAS---LVFGGRPLRVK-PPRVAFRKPMGTARGFKCGGFQLCAEWPPGELTCLWAVQSDVTFQVYKKGVSHSPYSLASLMFKEDSGMPGQADFKRRHVDGEVELAKDAGRAWLVLRLLRPPFLHGR---EQLKDTALSASTYN-LASLGALLAMNATGDVF---RGGSVWE------LDDSEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLFRQLHAFRLCTSSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSNLKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIAR-WLEGLGPRTGIAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRH-PRSLATCP-----LSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEV-RPERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPA-----------------------GTPVLVCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTN-PNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQV---ERFGGRMLKRTK--LEDAQGRLNTEF 1187
            I +V  G      +A++L ++L  ++ ++      +S  PP   P         + + + +++    AFV   S E A   +N A    L +   PL V   P  +F +   T R  K   F+                 SDV  ++   G   S     +      SG+    DF     DG  ++      A+L+    +   L      E L    L    YN ++SL  L+ +N++  VF       +++      LDD +   R  D +  G  GRC  YR+ +S        +   +  +   R+  SS  R   L  P      +   PLD +  +P    + + + +LV  +      + L L EK   LL     E    AL+ M     R   +   R ++ + WL    P+    + +   N+ + R  +TP R  C PPE E+S+ V RK+   +DRFLRV F+DE   +L        AN FS+  + I+    S   P+  A        LS  F    R  + +A ++ +QLR  S +F+        + I+ WMG  +  ++  K AAR+GQ  SST  T++V R E     PD     Y F+DG G+++ DLA E++  L  + N  PPSA+QIR  GCKG+LA WP +         G+++ +RPSM KF S  + +EV+ + R  P +LNRQ +TLLS+L VP++   +  ++M+  LD+    M++D   A   ++    +  G++           A  M+ AGF+   EP L+GML   R   + DL  + RI++P A  L+G +DE G L+ GQ +     P+                       GT V++ +NP LHPGD+R+L+ A D+P L HL+D +VF  KGDRP  ++ SG DLDGDLY V WD DL+PP ++               ++P M + P +            +  ++   FF   + N+NLG+I NAH+V AD SE GA  E+C+QLA L +TAVDFPK+G++V            Q L+ K YPDFM K +  +Y S K++G L+R    +   + P   K    P D   DT L +   ++  ++A      Y  ++ +L  +Y V  E + VSG +    R+ GR  +  K  L+ A   L  EF
Sbjct:   15 INQVSFGGYDKNVKAKELADFLEYEIGIIWRCRVKNSWTPPDSYPNFEVTNTMGLQKTDDYEKVEPHAFVHFASSEAAIRAKNAAGRCDLFYNQNPLMVNLGPESSFHR---TQRRRKMDPFKF----------------SDVCLEI---GTLVSLNEFVAGWKGPSSGV----DFVVDSFDGTCKILFTKETAFLIKGTTKHAVLQCNFKLEFLVRDILEIKQYNDISSLVVLVQLNSSPHVFYRTADDDIYDSVPFDMLDDEDPWIRTTDFTPQGVIGRCNSYRISMSPRYGLKLNKTMTY--IKDRRIPYSSSRRLKVLDDP------AVPTPLDSFFCIPCRDGISFEIMYLVNAVMHKGIINHLQLSEKFFELLRSQSREVNIKALNHMY-CYKRPVFDAYKRLKLVQEWLLK-NPKALKCSKVSDNNMEVNRLVITPTRAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGFHQLN-------ANVFSYYVAPIVRDITSNSFPQKTAVFQRVKTILSDGFYLCGRKYSFLAFSS-NQLRDRSAWFFAEDKNMMVSDIKNWMGKFTNRNIA-KCAARMGQCFSSTYETIKVPRSEVNSNFPDIKRNTYVFSDGIGIITPDLAAEVAEKLQLTEN--PPSAYQIRYAGCKGVLASWPKT-------DDGFRLYLRPSMSKFESKHDIIEVVSWTRFQPGFLNRQIVTLLSSLDVPNEVFSKLQDSMVYKLDQ----MLNDTDVALDVII----SCCGEEGST--------AALMLSAGFNPQTEPHLKGMLSCIRAAQLSDLLDKARIYVPSARWLMGCLDEIGLLEQGQCFIQISSPSLENCFVKHGLKISEGDSNVKVIKGT-VVMAKNPCLHPGDIRILE-AVDIPALYHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVAWDEDLIPPSKR---------------SWPPMDYAPVEAKLLPRP-----VNHQDIINFFTKNMVNENLGVICNAHVVHADQSEYGAMDEKCIQLAELAATAVDFPKTGKSVT---------MPQSLKPKMYPDFMGKDEFLSYMSKKILGILYRKVKHASKEDVPAFSKLPYTPEDITYDTDLEIPCSQDLVQDAWTHKCSYDGQLNALLGQYKVNTEEEVVSGHIWSMPRYNGRKQRELKERLKHAFHALRKEF 1100          
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Match: A0A2G4SKD3_RHIZD (RNA-dependent RNA polymerase (Fragment) n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4SKD3_RHIZD)

HSP 1 Score: 377 bits (968), Expect = 2.670e-111
Identity = 248/704 (35.23%), Postives = 363/704 (51.56%), Query Frame = 0
Query:  471 MIPRASVTPLRVVCQPPEQEMSSGVTRKFARYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSLATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYXXXXXXXXASIRKWMGDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPDRAAGPYEFTDGCGMMSEDLARELSNV--LGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRVAGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGVPDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQVGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDASCLLGIVDETGSLQPGQVYFSSELPAGTPVL---------VCRNPSLHPGDLRVLKTAGDLPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQWEGGAGGEEDGENGWNYPAMGFEPPKKPXXXXXSSGGMIGVREYGYFFLNYIRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVIPLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFTNPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKYGVTDEGQFVSGQV 1163
            M+ +  +TP  +  QPP  E ++ V R +  Y+DRF+RV F+DE   R+        A R       I N  +    R +             R    +A ++ SQLR H C+F+          IR WMG  S   VV KHA R+GQ  SST     +  +  + + D     Y F+DG G ++  LA +++    L H P     SAFQ R+GG KG+L V  D  +       G KV +RPS  KF S   +LEVI+ +  +  YLNRQ ITLLS LGV D    +  + ML  +DK+    +  P EA   L+          T      P+  ++  ++AGF    +P+++ +L   R   + DL+ + +I +P  + LLG++DET +L+ G+++      + T  +         V RNP  HPGD+RV++ A D P L HL++VVVFSSKG R  PS  SGGDLDGD Y+V WDP L+PPR+                NYP M +   K            + +R+   FF+NYI NDNLG IANAHL  AD S++GA    C+ LA LHS AVDFPKSG+  I           ++L V+K+PDFM+KKD+++Y+S K++G ++R+  +S + +      +E       DT L V G E +  EA+ + ++Y  +++ L ++ GV  E + VSG +
Sbjct:  109 MLRKVIITPSTLFIQPPNLETTNRVVRHYRDYADRFIRVQFMDEGFNRVG-------AARTKMTNEAIYNRIYDALKRGIQI---------GDRRYEFLAFSS-SQLREHGCWFFASTPDLTPDMIRSWMGVFSHEKVVAKHAVRMGQCFSSTRPICRLEADEVQFIDDVVYNGYTFSDGVGRIAPSLAEQVATQMDLRHIP-----SAFQFRLGGAKGVLTV--DKSLEN----GGVKVQLRPSQIKFKSEHLTLEVIRTSTYIHGYLNRQVITLLSALGVRDKVFLKLMDNMLHDIDKI----LRKPEEAVRVLL--------SNTDEAGTAPIMASI--IQAGFLERQDPYIKNLLNLFRVNILKDLKKKAKILVPQGAFLLGVMDETNTLEEGEIFVQIWDSSSTGTIRQIITKECVVFRNPCFHPGDVRVVQ-AVDRPNLHHLVNVVVFSSKGYRDIPSMCSGGDLDGDDYSVYWDPMLIPPRK----------------NYPPMDYTAAKPRLVED------VKIRDIQRFFVNYINNDNLGQIANAHLATADMSDKGAMDGRCILLAQLHSEAVDFPKSGKPAI---------LSEDLIVRKFPDFMQKKDKESYQSKKVLGHIYRSVDKSDYKDYMSMLTEEAV----YDTRLHVPGMEYYIGEARELRSDYNRDLLGLMNQSGVQTEAEIVSGYI 734          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig179.5110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC88_ECTSI0.000e+055.53RNA-dependent RNA polymerase n=1 Tax=Ectocarpus si... [more]
D8LNY3_ECTSI1.200e-24155.14RNA-dependent RNA polymerase n=1 Tax=Ectocarpus si... [more]
UPI001D1A384C1.740e-11533.59probable RNA-dependent RNA polymerase SHL2 n=1 Tax... [more]
K3YLC2_SETIT8.950e-11432.80RNA-dependent RNA polymerase n=5 Tax=Setaria TaxID... [more]
A0A167Q545_PHYB81.230e-11334.77RNA-dependent RNA polymerase n=1 Tax=Phycomyces bl... [more]
UPI00053C9B9F1.400e-11330.68RNA-dependent RNA polymerase 6-like isoform X1 n=3... [more]
K3XDW9_SETIT2.030e-11333.02RNA-dependent RNA polymerase n=10 Tax=Paniceae Tax... [more]
W8PVI0_SALMI1.780e-11237.18RNA-dependent RNA polymerase n=1 Tax=Salvia miltio... [more]
A0A2G5DG13_AQUCA1.960e-11229.74RNA-dependent RNA polymerase n=2 Tax=Thalictroidea... [more]
A0A2G4SKD3_RHIZD2.670e-11135.23RNA-dependent RNA polymerase (Fragment) n=1 Tax=Rh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 71..151
e-value: 0.0081
score: 25.2
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 477..1093
e-value: 2.1E-141
score: 472.5
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 302..1328
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 67..153
e-value: 9.3E-8
score: 34.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..1339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 59..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig179contigL-elsbetiae_contig179:23912..47925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig179.5110.1mRNA_L-elsbetiae_contig179.5110.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig179 23912..47925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig179.5110.1 ID=prot_L-elsbetiae_contig179.5110.1|Name=mRNA_L-elsbetiae_contig179.5110.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1340bp
MPRQRRRERRGRKKRSSLASASGAPMNLEHAKWIVSSAAQAREKQEDYRR
FKEDGSPGQRQFEEAAKNIVEVYVGNVPHGTEARDLVNYLHGQVLLLLSS
TAPPAEAPILRCEVFKRRSTFAFVTLRSREVAEALQNCASLVFGGRPLRV
KPPRVAFRKPMGTARGFKCGGFQLCAEWPPGELTCLWAVQSDVTFQVYKK
GVSHSPYSLASLMFKEDSGMPGQADFKRRHVDGEVELAKDAGRAWLVLRL
LRPPFLHGREQLKDTALSASTYNLASLGALLAMNATGDVFRGGSVWELDD
SEKLERVGDLSANGAFGRCLVYRVDVSQLLEDTNERARLFRQLHAFRLCT
SSRPREDRLRFPLRVRSHSSGQPLDGWSQVPEYHALPYRVKFLVECLTSN
LKFDALALDEKAVLLLAEADEENACLALSAMLGTDPRASLEKTPREEIAR
WLEGLGPRTGIAAILGGGNVMIPRASVTPLRVVCQPPEQEMSSGVTRKFA
RYSDRFLRVNFVDENMGRLPMPLSASLANRFSFKTSFILNTFHSRHPRSL
ATCPLSLWFGRSSRLTNIVARTTKSQLRGHSCFFYAGGGGGGAASIRKWM
GDMSGIDVVGKHAARLGQSLSSTTSTVEVRPERKKLVPDRAAGPYEFTDG
CGMMSEDLARELSNVLGHSPNEPPPSAFQIRMGGCKGMLAVWPDSVMRRV
AGRSGYKVLVRPSMEKFPSGRNSLEVIQYARKLPCYLNRQFITLLSTLGV
PDDAIEERYEAMLATLDKVSSCMVHDPSEAESALVRYYNTISGKKTGRKQ
VGPLWEALAMVRAGFDVTAEPFLQGMLRATRNKAMIDLRHRTRIFLPDAS
CLLGIVDETGSLQPGQVYFSSELPAGTPVLVCRNPSLHPGDLRVLKTAGD
LPELSHLIDVVVFSSKGDRPEPSKMSGGDLDGDLYAVVWDPDLLPPRRQW
EGGAGGEEDGENGWNYPAMGFEPPKKPPTTASSSGGMIGVREYGYFFLNY
IRNDNLGMIANAHLVFADFSEEGARCEECLQLAALHSTAVDFPKSGRAVI
PLSSPPDVGFVQELRVKKYPDFMRKKDRDTYESPKLIGRLFRNTPRSGFT
NPNPQKRQEFPGDFELDTSLLVWGWEEFAREAQVVFNEYTVEVMSLASKY
GVTDEGQFVSGQVERFGGRMLKRTKLEDAQGRLNTEFAQARRRETRENFM
CMNRHDEPEQIKAKYRAKFQDHVHDDDDDDNPDSDFEEQYEEGEEALFDE
GDEEHGGRQSDDPLLRNAPDGMEAYQKASAWYYVSYSDATNPYIAEARSA
GVGLNQPHMLYLSFPWICAYQQLCQIKEMSLKHGPPQLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR007855RNA-dep_RNA_pol_euk-typ
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf