prot_L-elsbetiae_contig998.18904.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig998.18904.1
Unique Nameprot_L-elsbetiae_contig998.18904.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length486
Homology
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: D7FSA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA5_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 4.360e-118
Identity = 240/283 (84.81%), Postives = 250/283 (88.34%), Query Frame = 0
Query:   11 SADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----DLDGVPLDEE-KRIVLRKVETEVLKLRDDLEAKGTPESEIVSQCEAKRAEMVESWEKNKAKAREAGMKRTGSSSS 288
            SADVVGVLKESLLVPETPIHVKIARLYLLSD+LHNSSAPVKKASSYRTHLQKGLPEIFDGLN+AFRGVEGRMTAKQVEDRIMALL+AWD WSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKA         XXXXXXXXXXXXXXXXXXX     XXXXXX    DLDGVPLDE  +R VLRKVETEVLKLRDDLEAKGTPE +I S+C AKRAEM+++WEKNKA      +KR  SSSS
Sbjct:  754 SADVVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKAARKAGGTAAXXXXXXXXXXXXXXXXXXXEDEGSXXXXXXXXXXDLDGVPLDERMERNVLRKVETEVLKLRDDLEAKGTPEEQIKSRCAAKRAEMMDTWEKNKAT-----LKRGSSSSS 1031          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 1.380e-100
Identity = 171/175 (97.71%), Postives = 174/175 (99.43%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKA 175
            MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSD+LHNSSAPVKKASSYRTHLQKGLPEIFDGLN+AFRGVEGRMTAKQVEDRIMALL+AWD WSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKA
Sbjct:  663 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKA 837          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 9.430e-51
Identity = 103/179 (57.54%), Postives = 135/179 (75.42%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVE--GRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLS--ALDLLKRLNYLNEYAKRKA 175
            MGFALDHA+AS +VV +LKESLL+ ETPI VK+ARLYLLSD+LHNSSAPV+ AS+YRT LQ  LP+IF+ LN+ FR VE  GRM+A+ +E++++ALL  W++WS+YPP YITGLEA+F R++G LEA       ++SLD E L +KA   G+  +  +  A  LL +LN LNEY + KA
Sbjct:  553 MGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATFERRAGALEAGLQDVDPKASLDLEDLKRKAKHTGVFFDDSNDTAAHLLVKLNLLNEYVRAKA 731          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.470e-50
Identity = 103/179 (57.54%), Postives = 135/179 (75.42%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVE--GRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIHTEGLS--ALDLLKRLNYLNEYAKRKA 175
            MGFALDHA+AS +VV +LKESLL+ ETPI VK+ARLYLLSD+LHNSSAPV+ AS+YRT LQ  LP+IF+ LN+ FR VE  GRM+A+ +E++++ALL  W++WS+YPP YITGLEA+F R++G LEA       ++SLD E L +KA   G+  +  +  A  LL +LN LNEY + KA
Sbjct:  553 MGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATFERRAGALEAGLQDVDPKASLDLEDLKRKAKHTGVFFDDSNDTAAHLLVKLNLLNEYVRAKA 731          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A7S3UX26_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX26_HETAK)

HSP 1 Score: 186 bits (473), Expect = 3.880e-49
Identity = 97/178 (54.49%), Postives = 128/178 (71.91%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVE--GRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGIH-TEGLSALDLLKRLNYLNEYAKRKA 175
            MGFALDHADAS +VV +L ESL +  TP  VK+ARL+LLSD+LHNSSAPV+ A+SYRT LQ  LP++FD L  A    E  GRM+A+  E ++M +L  W+ WS+YPPL+I+GLEA+F R+  DL+     GV E+ LD+  L +KA QAG+H T+   AL LL++L +LN+Y K KA
Sbjct:  360 MGFALDHADASEEVVQLLAESLGLKATPAPVKVARLHLLSDILHNSSAPVRHAASYRTRLQDALPQVFDALRLAREAEEAKGRMSAQSFESKVMRVLGVWEGWSLYPPLFISGLEATFRRRQEDLDRAKPEGVAEADLDRPGLEKKAKQAGLHFTDADGALLLLQKLTHLNKYIKAKA 537          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A836CAC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC0_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.010e-45
Identity = 95/190 (50.00%), Postives = 130/190 (68.42%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIH----------VKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKD----LTGVEESSLDKEALAQKANQAGIH-TEGLSALDLLKRLNYLNEYAKRKA 175
            MG ALD+++ SA VV +L ESL+     I           V +ARLYL+SDVLHNS+APV+ A+S+RT LQ  LP++F+ L  A RG+ GR+TA+Q+ +R++ALL+ W +WSIYPPL++TGLEAS MR   D+ A +       V E  +D+ AL +KA QAG+H ++ +SALDL  RLN+LN Y K KA
Sbjct:  561 MGAALDNSECSAHVVEILSESLMEAGRIISEDGPAPXXXXVIVARLYLVSDVLHNSAAPVRNATSFRTLLQSCLPQVFEALGTALRGIAGRLTARQLRERVLALLAVWSDWSIYPPLFLTGLEASLMRAPADMAAVEGATAAGDVREEDMDRAALERKARQAGLHVSDAMSALDLFNRLNHLNAYVKAKA 750          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: W7U2X6_9STRA (U2 snrnp-associated splicing factor putative n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2X6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.650e-36
Identity = 90/191 (47.12%), Postives = 125/191 (65.45%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESL---------LVPETPIHV--KIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASF---MRKSGDLEAKDLTGVEESSLDK--EALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRKA 175
            MGFALDHADAS +VVG+LKESL         L  E P+ +  ++ARLYL+SD+LHNSSA V+ AS+YRT LQ  LP +F   + +   V GR+TA+ VE++++ +L  W EWSIYPPL+I GLEA+    + K G+ E           L+K  +AL ++A QAG+ TEG   L LL+++  L+E+ K+KA
Sbjct:  735 MGFALDHADASEEVVGLLKESLCAEKGWSEDLAGEQPVSLSRRVARLYLVSDILHNSSAGVRNASTYRTSLQLALPYVFSAFHNSL-AVLGRLTAQHVEEKLLKVLKVWGEWSIYPPLFIAGLEATLTVDLEKEGE-EXXXXXXXXXXDLEKGRDALVRQARQAGLTTEGPLVL-LLRKMKRLDEFVKKKA 922          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A2U1MLD4_ARTAN (CID domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MLD4_ARTAN)

HSP 1 Score: 137 bits (345), Expect = 1.190e-32
Identity = 61/120 (50.83%), Postives = 88/120 (73.33%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKS 120
            MGFALD+ADA+ ++V VL ESL + ETPI  K+ARL L+SD+LHNSSAPVK AS+YRT  +  LP+I +  N  +R V GR+TA+ +++R+M +L  W +W ++   Y+ GL ++F+R S
Sbjct:  143 MGFALDNADAAGEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFETNLPDILESFNDLYRSVTGRITAEALKERVMKVLQVWADWFLFSDAYVNGLRSTFLRSS 262          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: K3X1G9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1G9_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 1.720e-32
Identity = 73/177 (41.24%), Postives = 114/177 (64.41%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMRKSGDLEAKDLTGVE---ESSLDKEALAQKANQAGIHTEGLSALDLLKRLNYLNEYAKRK 174
            MGF+LDH++A+ D+V V+ ES    +      +  LY+ SD+LHNSSA VK AS +RT  Q+ LPEI D L  A + + GRM+A  +++R++ +L+AW+ WS++PP+++ GL A+F+RK  + E + L  VE   +  +D+E L +   QAGI ++G  A  L+ RL +L E+   K
Sbjct:  486 MGFSLDHSEAAVDIVHVMLESFQNTQASAVTLVGYLYVASDILHNSSAAVKNASLFRTTFQECLPEIVDHLRLAHKAIVGRMSANAMKERVLNVLTAWESWSLFPPMFLVGLNATFLRKVEESEYQPLQPVEIPPDGEVDEERLRKACRQAGILSKG-DAKQLMTRLQWLKEFTAPK 661          
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Match: A0A6P6U1M1_COFAR (protein RRC1-like n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6U1M1_COFAR)

HSP 1 Score: 135 bits (340), Expect = 2.330e-32
Identity = 61/118 (51.69%), Postives = 87/118 (73.73%), Query Frame = 0
Query:    1 MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPVKKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDEWSIYPPLYITGLEASFMR 118
            MGFALD+ADA+ +VV VL ESL + ETPI  K+ARL L+SD+LHNSSAPVK AS+YRT  +  LP+I +  N  +R V GR+TA+ +++R++ +L  W +W ++   Y+ GL A+F+R
Sbjct:   69 MGFALDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESFNDLYRSVTGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLR 186          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig998.18904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSA5_ECTSI4.360e-11884.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCR2_9PHAE1.380e-10097.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WJA8_9STRA9.430e-5157.54Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WJ81_9STRA4.470e-5057.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3UX26_HETAK3.880e-4954.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CAC0_9STRA4.010e-4550.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U2X6_9STRA8.650e-3647.12U2 snrnp-associated splicing factor putative n=4 T... [more]
A0A2U1MLD4_ARTAN1.190e-3250.83CID domain-containing protein n=1 Tax=Artemisia an... [more]
K3X1G9_GLOUD1.720e-3241.24Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6P6U1M1_COFAR2.330e-3251.69protein RRC1-like n=1 Tax=Coffea arabica TaxID=134... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 1..117
e-value: 2.8E-4
score: 19.8
IPR006569CID domainPROSITEPS51391CIDcoord: 1..120
score: 25.574
IPR013170mRNA splicing factor Cwf21 domainSMARTSM01115cwf21_2coord: 221..269
e-value: 4.8E-7
score: 39.4
IPR013170mRNA splicing factor Cwf21 domainPFAMPF08312cwf21coord: 221..265
e-value: 4.7E-7
score: 29.9
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..120
e-value: 2.6E-21
score: 77.8
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 4..114
NoneNo IPR availablePANTHERPTHR23140RNA PROCESSING PROTEIN LD23810Pcoord: 1..402
NoneNo IPR availablePANTHERPTHR23140:SF0SWAP/SURP DOMAIN-CONTAINING PROTEINcoord: 1..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig998contigL-elsbetiae_contig998:997..12757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig998.18904.1mRNA_L-elsbetiae_contig998.18904.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig998 997..12757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig998.18904.1 ID=prot_L-elsbetiae_contig998.18904.1|Name=mRNA_L-elsbetiae_contig998.18904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=486bp
MGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDVLHNSSAPV
KKASSYRTHLQKGLPEIFDGLNQAFRGVEGRMTAKQVEDRIMALLSAWDE
WSIYPPLYITGLEASFMRKSGDLEAKDLTGVEESSLDKEALAQKANQAGI
HTEGLSALDLLKRLNYLNEYAKRKAAKKAGAGAGAGAAAGSNGSTRAGAA
GDDGGDEDDDEDDEDLDGVPLDEEKRIVLRKVETEVLKLRDDLEAKGTPE
SEIVSQCEAKRAEMVESWEKNKAKAREAGMKRTGSSSSRGGDSSRDSKSR
ERSKSGSSSSNGKARDSSSGGGGGRDHRSSAGKETDGYSSRRSHSASPAA
SDKDKDKDRDRDRGRDRGGDKEQSRSTGRSERSDRKSGSDRDRDRDRDRE
RDATAGGSSKKDKDSREDRSDKAREGRTKDHGSSGGSGGSGGGRGGDKDG
GGGDSKKKDRRRSSSRSRSPSSKRAKRGRSSDRWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR013170mRNA_splic_Cwf21_dom
IPR008942ENTH_VHS