prot_L-elsbetiae_contig9950.18881.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9950.18881.1
Unique Nameprot_L-elsbetiae_contig9950.18881.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 8.300e-144
Identity = 222/257 (86.38%), Postives = 241/257 (93.77%), Query Frame = 0
Query:    1 RKQSQQGEVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHRRTGLLAKEEGPKAIDRAAL 257
            ++ SQQGEV+E+ SEMW+NTPLNELDLT SEKGGPSYRHLPKNFPLLSCSERTS+E SVLND+WVSVPVGSEGGGSDVAFKH+RKNQHEDLLFKCEDERFELDMVIEAGSSAI+LLEPM +EI+ ID TAGARYQFK+DRRVLSPVQLAAITRIYG+HGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLN  WS VQRSTYYKSLDRRS+D+K+EDKKAH  + LVADI HRRT LLAKEE PK++DRAAL
Sbjct:  305 KEASQQGEVNEIASEMWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKCEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHRRTALLAKEEEPKSLDRAAL 561          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 5.130e-76
Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 0
Query:  104 MVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHRRTGLLAKEEGPKAIDRAAL 257
            MVIEAGSSAINLLEPM +EI+ ID TAGARYQFK+DRRVLSPVQLAAITRIYG+HGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLN  WS VQRSTYYKSLDRRS+DLK+EDKKAH  + LVADI HRR  LLAKEE PK +DRAAL
Sbjct:    1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRAALLAKEEEPKPLDRAAL 154          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A7S3XWL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWL9_HETAK)

HSP 1 Score: 234 bits (597), Expect = 3.310e-72
Identity = 122/238 (51.26%), Postives = 162/238 (68.07%), Query Frame = 0
Query:    7 GEVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDNTAGAR-----YQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHRR 239
            G   ++  ++W + PL+E+D  +  K  PSYR LPK++    CSER+ +E  VLND WVSVPVGSE    + +FKH+RKNQ+E+ LF+CEDERFE+DMVI++ ++A   LEP+A E+RA+    G R      Q+K+D+R LS V L AI RIYG+HGAEILELL+KNP   +PVIL RL+QKD EWR +R+ LN  W  VQ   ++KSLD RS   K  DKK    +ALV ++  RR
Sbjct:   56 GTADQLGGDLWYSMPLSEIDFGQCRKCTPSYRALPKDYLRPPCSERSLLEHRVLNDTWVSVPVGSE---DNYSFKHMRKNQYEEALFRCEDERFEVDMVIDSNAAAAAALEPLAREVRALQAAEGTRGGERRLQYKLDKRALSVVHLNAIIRIYGDHGAEILELLKKNPAGAIPVILKRLKQKDAEWRKARQDLNKHWKEVQEKNWHKSLDHRSFYFKQADKKQCSQRALVQEVKERR 290          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.010e-63
Identity = 128/278 (46.04%), Postives = 172/278 (61.87%), Query Frame = 0
Query:   12 VTSEMWSNTPLNELDLTKSEKGGPSYRHLPK--------------------NFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAI-DNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQK--------------------DVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHRRTGLLAKEEG 248
            +T+++W +TPL E+D ++  K  PSYR LPK                    ++P  SCSER+ +E SVLND WVSVPVGSE   +   FKH+RKNQ+E+ LF+CEDERFE+DMVI++ +S I LLEP+A+EI  +  + + A YQFK+D+R L  V L AITRIYG+ GAE+LELLRKNP   VP+IL RL+QK                    D EWR +R  L+  W  +   TY+KSLDRRS   K  D++A+  +AL+A+I        A+E+G
Sbjct:  632 LTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSN---FKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDG 906          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A7S1UGB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGB0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.480e-63
Identity = 112/241 (46.47%), Postives = 158/241 (65.56%), Query Frame = 0
Query:    7 GEVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAI-------DNTAGAR-----YQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADI 235
            G+   + ++ W    ++++D T+  +  PSYR LP+ FP   CS R++ +  VLND WVS+PVGSE    + +FKH+R+N +E+ LFKCEDERFE+DMVI++ +S I +LEP+A EI A+         TAG       +Q+K+D R LS V + AI+RIYGEHGAEI ELLRKNP   VPV+L RL+QKD+EWR +R+ L   W  +  + ++KSLD RS   + +DK+A   + L  DI
Sbjct:   89 GKAGGLAAQPWYGMAVSDVDFTQCRRCTPSYRALPQYFPRPPCSMRSTDDGKVLNDQWVSLPVGSE---ENYSFKHMRRNTYEETLFKCEDERFEMDMVIDSNASTIRVLEPLAAEIEALRVAEGDGGETAGIAGAVPAFQYKLDPRTLSRVHINAISRIYGEHGAEIQELLRKNPAGAVPVVLNRLKQKDIEWRRARQELARQWKGLMEANFHKSLDHRSFYFRTQDKRAISIRGLTQDI 326          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A7S2SFF8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFF8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.760e-61
Identity = 108/234 (46.15%), Postives = 152/234 (64.96%), Query Frame = 0
Query:    7 GEVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAID--NTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHR 238
            G   +     W + PL ++D +   +  PSYR LP  +P   CSERT++  SVLND WVSVP+GSE   S    K+ R+NQ+E+ LFKCED+R+E+DMVI++  +AI  LEP+A E+ A+   N +  ++++++++R LS + L AI RIYG+HG EILELLR+NP   +PVIL RL++KD EW   R+ LN  W       Y KSLD RS   KH +K+A+  K LVA+I  +
Sbjct:  568 GATDDPVESAWFSMPLTDIDFSNCRRCTPSYRALPAAYPKAPCSERTAMCRSVLNDTWVSVPLGSEDSSS----KNHRRNQYEEALFKCEDDRYEIDMVIDSNKAAIRALEPLAQEVEALSLKNGSNFKFRYRLEKRTLSVIHLKAIARIYGDHGTEILELLRRNPAAAIPVILKRLKEKDDEWCRDRQELNKGWKDQMEKNYAKSLDHRSFYFKHHEKRAYTQKVLVAEIKEK 797          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A7S3HNY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNY2_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.490e-60
Identity = 111/252 (44.05%), Postives = 155/252 (61.51%), Query Frame = 0
Query:    8 EVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDN-----------------TAGA-------RYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADI 235
            E  E  S++W   PL+E+D  +  K  PSYR LP+++P   C+ER+  E+ VLND WVS+P+GSE      +FKH+RKNQ+E+ LFKCEDERFE+DMVI++    I +LEP+A+EI  + +                 T G        R+ F++++R LS + L +I RIYG+HG EILELLR+NP  T+PV+L RL+QKD+EWR +R  LN  W  V    + +S D RS   +  DKK    + LV +I
Sbjct:  184 EYEEHKSDVWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFKCEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEI 432          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A067BV90_SAPPC (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BV90_SAPPC)

HSP 1 Score: 213 bits (543), Expect = 5.540e-60
Identity = 112/219 (51.14%), Postives = 146/219 (66.67%), Query Frame = 0
Query:   15 EMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVA 233
            E+W   PL E DL++  +  PSYR LP ++P+   S R+ +E +V ND WVSVP GSE    D +FK++RKNQ+E+ LFKCEDERFE+DMVI+A +S I +L P+A EI  +  T+   +Q+ +D+  L    L AITRIYGE G +ILELLRK+P   +PVIL RL QKD EWR +R+ LN  W  V    Y+KSLD  S   K +DKKA   KAL+A
Sbjct:  268 EIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERAVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLSATSPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQKDEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLA 482          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A5A8E0Z5_CAFRO (HDAC_interact domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0Z5_CAFRO)

HSP 1 Score: 214 bits (544), Expect = 1.070e-59
Identity = 112/228 (49.12%), Postives = 149/228 (65.35%), Query Frame = 0
Query:    9 VSEVTS-EMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADI 235
             SEVT+ + +   P+ +LD     +  PSYR LP  +P L CSER   E +VLND WVS+  GSE    D +FKH+R+N +ED LF+CEDER+E+DMVI+  +SAI +L+P+A EI  +    G ++QF++DRR L  + L AI R+YGE G E+LELLRKNP   VPVIL RL QKDVEW+ +R   N  W  V    YY+SLD RS   +  DK+A   K+LV ++
Sbjct:  426 ASEVTATDAYHTLPVADLDFRGCRRCTPSYRSLPDGYPQLRCSERAPWEQAVLNDRWVSIQTGSE----DYSFKHMRRNIYEDALFRCEDERYEVDMVIDTNASAIRILQPLAQEIHTLRAAKGFQWQFRLDRRALGVIHLKAIARVYGERGEEMLELLRKNPGGAVPVILRRLMQKDVEWKQARRVHNERWRGVMADNYYRSLDHRSFYFRQHDKRAIAAKSLVQEM 649          
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Match: A0A1V9ZFI4_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFI4_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.900e-59
Identity = 111/219 (50.68%), Postives = 145/219 (66.21%), Query Frame = 0
Query:   15 EMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERFELDMVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAAITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWSTVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVA 233
            E+W   PL E DL++  +  PSYR LP ++P+   S R+ +E SV ND WVSVP GSE    D +FK++RKNQ+E+ LFKCEDERFE+DMVI+A +S I +L P+A EI  +  T+   +Q+ +D+  L    L AITRIYGE G +ILELLRK+P   +PVIL RL+QKD EWR +R+ LN  W  V    Y+KSLD  S   K +DKKA   K  +A
Sbjct:  619 EIWPFIPLAETDLSQCRRATPSYRALPSSYPIPPSSSRSKMERSVCNDAWVSVPTGSE----DFSFKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLQATSPTGWQYVLDKGALRVTHLNAITRIYGESGHQILELLRKHPAGAIPVILKRLQQKDEEWRRARQDLNKQWKEVNEKNYHKSLDHSSFYFKQKDKKATSTKVFLA 833          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9950.18881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0X2_ECTSI8.300e-14486.38HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KFU2_9PHAE5.130e-7685.71Sin3a_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3XWL9_HETAK3.310e-7251.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZD67_9STRA1.010e-6346.04HDAC_interact domain-containing protein n=1 Tax=Tr... [more]
A0A7S1UGB0_9STRA2.480e-6346.47Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2SFF8_9STRA8.760e-6146.15Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3HNY2_9STRA1.490e-6044.05Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A067BV90_SAPPC5.540e-6051.14HDAC_interact domain-containing protein n=1 Tax=Sa... [more]
A0A5A8E0Z5_CAFRO1.070e-5949.12HDAC_interact domain-containing protein n=6 Tax=Ca... [more]
A0A1V9ZFI4_9STRA1.900e-5950.68Paired amphipathic helix protein Sin3 n=1 Tax=Thra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013194Histone deacetylase interacting domainSMARTSM00761hdac_interact2seq4bcoord: 29..133
e-value: 2.0E-42
score: 156.9
IPR013194Histone deacetylase interacting domainPFAMPF08295Sin3_corepresscoord: 33..126
e-value: 6.9E-32
score: 109.4
IPR039774Transcriptional regulatory protein Sin3-likePANTHERPTHR12346SIN3B-RELATEDcoord: 15..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9950contigL-elsbetiae_contig9950:1369..6623 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9950.18881.1mRNA_L-elsbetiae_contig9950.18881.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9950 1369..6623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9950.18881.1 ID=prot_L-elsbetiae_contig9950.18881.1|Name=mRNA_L-elsbetiae_contig9950.18881.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
RKQSQQGEVSEVTSEMWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCS
ERTSVESSVLNDVWVSVPVGSEGGGSDVAFKHIRKNQHEDLLFKCEDERF
ELDMVIEAGSSAINLLEPMADEIRAIDNTAGARYQFKMDRRVLSPVQLAA
ITRIYGEHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNNAWS
TVQRSTYYKSLDRRSLDLKHEDKKAHVPKALVADIAHRRTGLLAKEEGPK
AIDRAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013194HDAC_interact_dom
IPR039774Sin3-like