prot_L-elsbetiae_contig995.18878.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig995.18878.1
Unique Nameprot_L-elsbetiae_contig995.18878.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length890
Homology
BLAST of mRNA_L-elsbetiae_contig995.18878.1 vs. uniprot
Match: A0A6H5JDF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDF5_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 6.200e-127
Identity = 388/824 (47.09%), Postives = 440/824 (53.40%), Query Frame = 0
Query:  117 MVLWRHECSRYASSSRIGYHPNHPSANHPSSRPSSAATILRPFSAGRVPEQXXXXXXXXXXXXASSALPRRSIPLQEGGADSRAGWDTHTTGEESGLPLARASGGGVRGISRN-RPSTATPRLA-ADDADELVAGPHPERGFSASGARAVDGCVTNDGTTGGRG-----------MR-ATSARLRSPMDPNTNLAIEGEGEEGDEFLEEIYEDLDDEDDGELDNRISIMESRFSTAGRERPDPAVGDGATGGSDLVGVTRQRQRRSGPQQAAVSATPRSATSQRPPRAPLQQER-----------RLSAESRTNRRLTISSARANGGAARTEAGDGTHGTQQRYPAYPPTAIHDARPPRAIRSRPTSAPV---AFHQD-QGGGRGVNDPMAPLYARWRRLQMSAGAESGDGRAAGVGNGQQQRMRPVRDVATAVPSWDGGV-GNYRPLSSATEEAPGTI-------ATAGRGVEDGAAEQ---QRSSGSVSTPTS--SRPSSAAFRSWIKARPSARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGLSEAALAKMEDHYTAVVLKND----SQSLQRGRTAASPRKKGDRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXKKKRGRKLGGAGKXXXXXXXXXXXXXXXXXXXXXAFMAEHFPPEERQGVSLLGMEQEEECRHASEVLSRAGVWVSSSALRRALVIPTDRPIETCLAGLPSPMEGLRDAPYPTPAPPKPFAVRRRHEP----LSPSPRMSRGRAGVTAGTTALSLRKAGGA-RKRSPTPGRXXXXXXXXXXXXXXRARKKTGVRGR 889
            MVLWRHECSRYASSSRIGYHPNHPSA+HP+SRPSSAATILRPFSAGRVP+Q            ASSALP RS P    G DS           E+G       G G   ++ + RP +A PRL  AD A+       P+RG SAS AR  DG V    T                MR A++ R +SP++     ++EG G  GD+  +         DDGEL+ RISIMESRFST GRERP  A  DG     D   +  +RQR SG ++      P S  +QRPPRA                 ++ + SR  RR   SSARA G    T AG+ +   Q+             +PPR IRSRPTSAP    +  Q+ Q G   VNDPMAPL+ R  RLQMS    SG  R                 V TAVPSWD  V G  RPLSSAT+ APG         A     V DG  E+   +     ++ P +  SRPSSAAFR WIKARP ARSAVSAVSSARTLGMDDPELVHLQLEMESRRGG+SE+ L +MEDHYTAVVLKN         QRGR A            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX         G                        AFMAEHFP EE Q           ECR ASE LSRAG+ VSS ALRRALVIPTDRP+ETCLAGLP P EGLRDAP+P   PP               LS SP  SRG      GT     +K GG  R+RSP+P                  R+  G+RGR
Sbjct:    1 MVLWRHECSRYASSSRIGYHPNHPSASHPTSRPSSAATILRPFSAGRVPQQSNDHDHHQQQR-ASSALPPRSQPF---GQDSGL--------YEAGQNRTIEEGAGRADLTPSVRPRSAIPRLQRADAAEPDDNNSRPKRGVSASAARGNDGGVDATSTXXXXXXXXXXXXXXXXMRSASTTRSQSPVNNQDRSSVEGWG--GDDVFDXXXXXXX-XDDGELEARISIMESRFSTVGRERPVSAADDGDVTAGDGGNLDAERQRWSGARRTGAPDAPLSTATQRPPRAXXXXXXXXXXXXXXXXXQMFSRSRPARRHVTSSARAAG----TRAGEDSREQQRLLFPLKTFVSGQKQPPRVIRSRPTSAPADGSSLPQERQRGDVAVNDPMAPLHTRRMRLQMS----SGGSRPPAEXXXXXXXXXXXAGVKTAVPSWDRNVDGGTRPLSSATDGAPGAAXXXXXXAAVYDDNVADGDTEEGGGRFKPNEITPPMNNHSRPSSAAFRGWIKARPGARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGMSESTLVRMEDHYTAVVLKNTIVPRRPQQQRGRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTA------------ASGKVYTSAGAFMAEHFPSEEEQ-----------ECRKASEALSRAGLSVSSEALRRALVIPTDRPLETCLAGLPHPTEGLRDAPFP---PPHSLTTLGHXXXXXXLLSSSPLGSRGN---VVGTGPAFGKKVGGVTRRRSPSPA----------------GRRHRGIRGR 756          
BLAST of mRNA_L-elsbetiae_contig995.18878.1 vs. uniprot
Match: D8LKE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE2_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 2.730e-63
Identity = 299/758 (39.45%), Postives = 331/758 (43.67%), Query Frame = 0
Query:  112 SRRESMVLWRHECSRYASSSRIGYHPNHPSANHPSSRPSSAATILRPFSAGRVPEQXXXXXXXXXXXXASSALPRRSIPLQEGGADSRAGWDTHTTGEESGLPLARASGGGVRGISRNRPSTATPRLAADDADELVAGPHPERGFSASGARAVDGCVTNDGTTGGRGMRATSARLRSPMDPNTNLAIEGEGEEGDEFLEEIYEDLDDEDDGELDNRISIMESRFSTAGRERPDPAVGDGATGGSDLVGVTRQRQRRSGPQQAAVSATPRSATSQRPPRAPLQQERRLSAESRTNRRLTISSARANGGAARTEAGDGTHGTQQRYPAYPPTAIHDARPPRAIRSRPTSAPVAFHQDQGGGRGVNDPMAPLYARWRRLQMSAGAESGDGRAAGVGNGQQQRMRPVRDVATAVPSWDGGVGNYRPLSSATEEAPGTIATAGRGVEDGAAEQQRSSGSVSTPTSSRPSSAAFRSWIKARPSARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGLSEAALAKMEDHYTAVVLKNDSQ----SLQRGRTAASPRKKGDRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXKKKRGRKLGGAGKXXXXXXXXXXXXXXXXXXXXXAFMAEHFPPEERQGVSLLGMEQEEECRHASEVLSRAGVWVSSSALRRALVIPTDRPIETCLAGLPSPMEGLRDAPYPTPAPPKPFAVRRRHEP---LSPSPRMSRGRAGVTAGTTALSLRKAGGARKRSPTP 862
            SRRESMVLWRHECSRYASSSRIGYHPNHPSA+HP+SRPSSAATILRPFSAGRVP+Q   XXXXXXXXX S ALP RS                 T G+ESGL                                          + A   R ++     +G   GR   A SAR RS +                                           R   A    PD                                                         SRT R ++                                                                    +PL       Q  +  E G+G                 DV                                   E+G    + +  + S    SRPSSAAFR WIKARP ARSAVSAVSSARTLGMDDPELVHLQLEMESRRGG+SE+ LA+MEDHYTAVVLKN S       QRGR A SPR        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX             XXXXXXX              AFMAEHFP EE+QGVSLLGMEQEEECR+AS+ LSR G+ VS+ ALRRALVIPTDRP+ETCLAGLP P EGLRDAP+P P  P    +R  H P   LS SP  SRG   V      L  +      +RSP+P
Sbjct:    6 SRRESMVLWRHECSRYASSSRIGYHPNHPSASHPTSRPSSAATILRPFSAGRVPQQSYDXXXXXXXXXXS-ALPPRS----------------QTLGQESGL------------------------------------------YEAGQNRTIE-----EGA--GRADLAPSARPRSAI------------------------------------------PRLGRADAAEPDDD------------------------------------------------------SSRTKRGVSX--------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPL-----NNQDRSSGEGGEG----------------DDVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNTEEGGGRLKPNETTPSMNNHSRPSSAAFRGWIKARPGARSAVSAVSSARTLGMDDPELVHLQLEMESRRGGMSESTLARMEDHYTAVVLKNTSAPRRPQQQRGRPA-SPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXEGTAASGKVYTSAGAFMAEHFPSEEKQGVSLLGMEQEEECRNASDALSRVGLSVSNEALRRALVIPTDRPLETCLAGLPHPTEGLRDAPFPPP--PTFTTLRNPHPPSLLLSSSPLGSRGH--VVGTGPGLGKKDGSVTLRRSPSP 538          
BLAST of mRNA_L-elsbetiae_contig995.18878.1 vs. uniprot
Match: A0A836C9T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.740e-6
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 0
Query:   13 VTVFTNIAGAVAVTVDRDSSAGAGRQLSSKPLPESIFNPFQECQSRRQEPATPK-------RRRSTGQDVVAAENPHVASAAAAALAVEGIKKGVRDALDRWALQTSRRESMVLWRHECSRYASSSRIGYHPNHPSANHPSSRPSSAAT 154
            VT+ T+  GAVAV    D S      L    LP + + P+     R     TP          ++  Q+++  ++ HV S          I + ++  L RWAL  + RE+ +LW+ E +RY SSSR+G+HPNHP      SRP SAAT
Sbjct:   32 VTIVTSYYGAVAV----DRSTQKPYTLEIPELPANTYAPYGAHPHRPPPQPTPPPAVHPLLSAKAPSQELLHLDSQHVLS----------IHESIKQELGRWALMRAEREARLLWKMEAARYGSSSRLGHHPNHPVGG---SRPVSAAT 163          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig995.18878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDF5_9PHAE6.200e-12747.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKE2_ECTSI2.730e-6339.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9T7_9STRA3.740e-634.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig995contigL-elsbetiae_contig995:11584..16121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig995.18878.1mRNA_L-elsbetiae_contig995.18878.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig995 11584..16121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig995.18878.1 ID=prot_L-elsbetiae_contig995.18878.1|Name=mRNA_L-elsbetiae_contig995.18878.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=890bp
WDTSNATDHAPSVTVFTNIAGAVAVTVDRDSSAGAGRQLSSKPLPESIFN
PFQECQSRRQEPATPKRRRSTGQDVVAAENPHVASAAAAALAVEGIKKGV
RDALDRWALQTSRRESMVLWRHECSRYASSSRIGYHPNHPSANHPSSRPS
SAATILRPFSAGRVPEQQQQQQQQQQQQRASSALPRRSIPLQEGGADSRA
GWDTHTTGEESGLPLARASGGGVRGISRNRPSTATPRLAADDADELVAGP
HPERGFSASGARAVDGCVTNDGTTGGRGMRATSARLRSPMDPNTNLAIEG
EGEEGDEFLEEIYEDLDDEDDGELDNRISIMESRFSTAGRERPDPAVGDG
ATGGSDLVGVTRQRQRRSGPQQAAVSATPRSATSQRPPRAPLQQERRLSA
ESRTNRRLTISSARANGGAARTEAGDGTHGTQQRYPAYPPTAIHDARPPR
AIRSRPTSAPVAFHQDQGGGRGVNDPMAPLYARWRRLQMSAGAESGDGRA
AGVGNGQQQRMRPVRDVATAVPSWDGGVGNYRPLSSATEEAPGTIATAGR
GVEDGAAEQQRSSGSVSTPTSSRPSSAAFRSWIKARPSARSAVSAVSSAR
TLGMDDPELVHLQLEMESRRGGLSEAALAKMEDHYTAVVLKNDSQSLQRG
RTAASPRKKGDRGGKSPRKRGPSKGKKGSRTGGSKSKSKSPTKGRKKKGK
KKRGRKLGGAGKRRGGGAGERSAGAGKVYASAGAFMAEHFPPEERQGVSL
LGMEQEEECRHASEVLSRAGVWVSSSALRRALVIPTDRPIETCLAGLPSP
MEGLRDAPYPTPAPPKPFAVRRRHEPLSPSPRMSRGRAGVTAGTTALSLR
KAGGARKRSPTPGRRGARGRGKSPAGGERARKKTGVRGR*
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