Homology
BLAST of mRNA_L-elsbetiae_contig9929.18863.1 vs. uniprot
Match:
D8LKN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN9_ECTSI)
HSP 1 Score: 199 bits (505), Expect = 3.020e-58
Identity = 115/235 (48.94%), Postives = 157/235 (66.81%), Query Frame = 0
Query: 4 ALYCTAMPLLLMGIADMLELWVDTLPSQLLPADSFAIKVMHLAEEKSVFFWVGRVGSGGLAAFGLSASFLLPGETVIRCVDLMTGAAAACAFVGFNFVGFHLTTVINNAKRQASPSALAFYDCAIHTLRIQVAALSTSAVVWVVSVVSLEPQLGGFGARSPIIPISIMIADAYAGFGLAVHFAKVGPARGAPTSHGAASP----------AASRMHAAKAAISEVGAEVRQSLSL 228
AL PL+ M +A M++LW++TLP+QL+PADS AIKV+ LAE+K++ WVG + GL FGL F+L V+R V+L+ + FNFVG +LT +IN AKR A PS++AFY+ AIHTLRIQV AL+ + VVW+V VV+LEP LGG GAR+P+IP +IM+ DA+ GF LAVHFAK+GP TS + +P AAS A+A +S+VGA+ + +S+
Sbjct: 128 ALCSITFPLVCMAVAHMIDLWINTLPTQLVPADSVAIKVIKLAEKKNLCLWVGWLAIAGLTPFGLLTFFVLDVIKVVRAVNLV---------ICFNFVGVNLTKIINGAKRNAGPSSIAFYEQAIHTLRIQVFALTVAGVVWIVMVVALEPYLGGVGARTPVIPFTIMLLDAFVGFSLAVHFAKIGP-----TSRQSFNPLNQLGTQMNSAASPWGGARAILSDVGAKASEVMSM 348
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9929.18863.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M L L A L Y C T A M P L L L M G I A D M L E L W V D T L P S Q L L P A D S F A I K V M H L A E E K S V F F W V G R V G S G G L A A F G L S A S F L L P G E T V I R C V D L M T G A A A A C A F V G F N F V G F H L T T V I N N A K R Q A S P S A L A F Y D C A I H T L R I Q V A A L S T S A V V W V V S V V S L E P Q L G G F G A R S P I I P I S I M I A D A Y A G F G L A V H F A K V G P A R G A P T S H G A A S P A A S R M H A A K A A I S E V G A E V R Q S L S L S L F T G K T A T I T H M T V K P A P P A A S S S A P G G K R V V P T M E D I E S V E * 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 3.02e-58 / Id = 48.94 Sequence D8LKN9_ECTSI
Match Name E-value Identity Description
D8LKN9_ECTSI 3.020e-58 48.94 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M L L A L Y C T A M P L L L M G I A D M L E L W V D T L P S Q L L P A D S F A I K V M H L A E E K S V F F W V G R V G S G G L A A F G L S A S F L L P G E T V I R C V D L M T G A A A A C A F V G F N F V G F H L T T V I N N A K R Q A S P S A L A F Y D C A I H T L R I Q V A A L S T S A V V W V V S V V S L E P Q L G G F G A R S P I I P I S I M I A D A Y A G F G L A V H F A K V G P A R G A P T S H G A A S P A A S R M H A A K A A I S E V G A E V R Q S L S L S L F T G K T A T I T H M T V K P A P P A A S S S A P G G K R V V P T M E D I E S V E * 20 40 60 80 100 120 140 160 180 200 220 240 260 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = 0.615 Score = Score = Score = Score = Score = Sequence SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_C_REGION TRANSMEMBRANE TRANSMEMBRANE SignalP-noTM TMhelix TMhelix TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..14
None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..18
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 74..84
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 19..50
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 106..271
None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 15..18
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 85..105
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 51..73
None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..20 score: 0.615
None No IPR available TMHMM TMhelix coord: 53..75
None No IPR available TMHMM TMhelix coord: 130..152
None No IPR available TMHMM TMhelix coord: 2..24
None No IPR available TMHMM TMhelix coord: 88..110
None No IPR available TMHMM TMhelix coord: 164..186
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig9929.18863.1 ID=prot_L-elsbetiae_contig9929.18863.1|Name=mRNA_L-elsbetiae_contig9929.18863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp MLLALYCTAMPLLLMGIADMLELWVDTLPSQLLPADSFAIKVMHLAEEKS VFFWVGRVGSGGLAAFGLSASFLLPGETVIRCVDLMTGAAAACAFVGFNF VGFHLTTVINNAKRQASPSALAFYDCAIHTLRIQVAALSTSAVVWVVSVV SLEPQLGGFGARSPIIPISIMIADAYAGFGLAVHFAKVGPARGAPTSHGA ASPAASRMHAAKAAISEVGAEVRQSLSLSLFTGKTATITHMTVKPAPPAA SSSAPGGKRVVPTMEDIESVE* back to top