prot_L-elsbetiae_contig9878.18815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9878.18815.1
Unique Nameprot_L-elsbetiae_contig9878.18815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length129
Homology
BLAST of mRNA_L-elsbetiae_contig9878.18815.1 vs. uniprot
Match: A0A6H5JNR4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNR4_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 3.700e-64
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MFAARAMSKVAVPARAAASRAAVATPKRGMAGGAAPKYTGWEAKVREKLPKDEQVVVAISGFYVGLYVVCKGLSALFSSPKKAEVAAPVVAATTTSSDIPTGSGDDFWQWLEGAGNMEKYLATIDAAE 128
            MFAARAMSK A PARA ASRAA A PKRGMAGGAAP+YTGWEA++REKLPKDE VVVAISGFYVGLYV+ KG+SALFSSP+K EVAAPVVA++ TSSDIP G  D+FWQWLEGAGNMEKYLATID A+
Sbjct:    1 MFAARAMSKAAAPARAVASRAAPAVPKRGMAGGAAPEYTGWEAQIREKLPKDEHVVVAISGFYVGLYVLVKGISALFSSPEK-EVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATIDKAQ 127          
BLAST of mRNA_L-elsbetiae_contig9878.18815.1 vs. uniprot
Match: A0A7R9UII2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UII2_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.320e-8
Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   26 PKRGMAGGAAPKYT--GWEAKVREKLPKDEQVVVAISGFYVGLYVVCKGLSALFSSPKKAEV---AAPVVAATTTSSDIPTGSGDDFWQWLEGAGNMEKYLATIDA 126
            PKR  AGGA  +Y     +  VR+ LP D+Q+VVAI   Y G+Y+    LS LFS   K E    AAP  AA   +  + +   + F  W+   GN EKYL + +A
Sbjct:   39 PKR-FAGGAPTEYAPGSLDYIVRQYLPHDKQIVVAIVSGYFGIYL----LSTLFSGGSKKEETAEAAPAPAAAPAAGGVLSMEDEGFGDWIMQEGNFEKYLNSFEA 139          
BLAST of mRNA_L-elsbetiae_contig9878.18815.1 vs. uniprot
Match: A0A6U4IDD0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IDD0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.110e-8
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   11 AVPARAAASRAA-VATPKRGMAGGAAPKYTGWEAK--VREKLPKDEQVVVAISGFYVGLYVVCKGLSALFSSPKKAEVAAPVVAATTTSSDIPTGSGDDFWQWLEGAGNMEKYLATID 125
            A+ ARA  +RAA +  PKR   GGAA +Y        VR+ LP+D  VV+AI G Y  LY+    LS LFS  K          A+T+SS + + + + F +W+   GN+EKY   ++
Sbjct:   12 ALAARAQRARAANMKMPKR-FGGGAAVEYEPGSPDYIVRQYLPEDRHVVMAICGGYFSLYL----LSKLFSGGKXXXXXXXXXPASTSSSGVKSMADEGFAEWIAVDGNIEKYFKAVE 124          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9878.18815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNR4_9PHAE3.700e-6482.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9UII2_9STRA1.320e-839.62Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4IDD0_9STRA4.110e-838.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9878contigL-elsbetiae_contig9878:972..3560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9878.18815.1mRNA_L-elsbetiae_contig9878.18815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9878 132..3581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9878.18815.1 ID=prot_L-elsbetiae_contig9878.18815.1|Name=mRNA_L-elsbetiae_contig9878.18815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp
MFAARAMSKVAVPARAAASRAAVATPKRGMAGGAAPKYTGWEAKVREKLP
KDEQVVVAISGFYVGLYVVCKGLSALFSSPKKAEVAAPVVAATTTSSDIP
TGSGDDFWQWLEGAGNMEKYLATIDAAE*
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