prot_L-elsbetiae_contig9865.18806.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig9865.18806.1
Unique Name	prot_L-elsbetiae_contig9865.18806.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	672

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 2.330e-51
Identity = 106/149 (71.14%), Postives = 118/149 (79.19%), Query Frame = 0

Query:    1 ALKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGAATKKAASRAFLDRLRITLKKAPIRRGGGGEPPGP----SNNKRSLDQ--KPPAPSP 143
            A+KWS VA LLPGR+GKQCRERWFNHLDP+VKKTEWTP EDE+LFNAQ FFGTRWCEISKFLPGRTENAVKNRYNSSAR +W  SQPQA G  A KKAAS+AFLDRL  TL K     GGGG+  G     S +KR+L++  KP  P+P
Sbjct:  327 AVKWSLVAVLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFLPGRTENAVKNRYNSSARQKWFSSQPQANGRPANKKAASKAFLDRLMDTLGKDG---GGGGDGNGGEGFCSGSKRTLERNAKPTKPNP 472

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A6H5LA90_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA90_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 2.060e-50
Identity = 96/122 (78.69%), Postives = 103/122 (84.43%), Query Frame = 0

Query:    1 ALKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGAATKKAASRAFLDRLRITLKKAPIRRGGGG 122
            A+KWS VA LLPGR+GKQCRERWFNHLDP+VKKTEWTP EDE+LFNAQ FFGTRWCEISKFLPGRTENAVKNRYNSSAR +W  SQPQA G  A+KKAAS+AFLDRL  TL       GGGG
Sbjct:  327 AVKWSLVAMLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFLPGRTENAVKNRYNSSARQKWFSSQPQANGRPASKKAASKAFLDRLMDTLGND----GGGG 444

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.030e-33
Identity = 61/107 (57.01%), Postives = 80/107 (74.77%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGAATKKAASRAFLDRLR 108
            +KWS +A  LPGR+GKQCRERWFNHLDP++K++ WTP ED ++F AQ   G RWCEI+K LPGRTENAVKNR+NSSA+ +W+        GAAT +  ++  LD ++
Sbjct:  116 VKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAKLLPGRTENAVKNRFNSSAQKKWVSKN-----GAATGEGITQQLLDAVQ 217

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.370e-33
Identity = 62/93 (66.67%), Postives = 72/93 (77.42%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGAA 94
            +KWSD+A LLPGR+GKQCRERWFNHLDPS+ K  WT  ED I+F AQ+ FG RWCEI+K LPGRTEN VKNR+NSSAR +W   +   GG  A
Sbjct:  317 VKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAKLLPGRTENMVKNRWNSSARKKWFADRKAEGGNLA 409

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.330e-33
Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGA 93
            +KWS VA  LPGR+GKQCRERWFNHLDPS+KK EW+P ED I+F AQ + G RWCEI+K LPGRTENAVKNR+NSSAR +WL   P   GGA
Sbjct:  170 VKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAKLLPGRTENAVKNRFNSSARKKWLDQNP---GGA 258

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.200e-32
Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWL 83
            +KWS +A  LPGR+GKQCRERWFNHLDPS+KK EWTP ED++LF AQ   G RWCEI+K LPGRTENAVKNR+NSSAR RWL
Sbjct:  222 IKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAKLLPGRTENAVKNRWNSSARKRWL 303

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.720e-32
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYRWL 83
            +KWS +A  L GR+GKQCRERWFNHLDP++ K EWTP ED I+F AQ  FG RW +I+K LPGRTEN+VKNR+NSSAR +WL
Sbjct:   82 VKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKKWL 163

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: D7G3Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y8_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.490e-32
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 0

Query:    1 ALKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFL-PGRTENAVKNRYNSSARYRWLGSQPQAGGGAATKKAASRAFLDRLRITLK 112
            ++KWS++A  +PGRMGKQCRERWFNHL P++KK  WT +E+++LF+AQ+FFG RWCEIS+ + PGRT N +KNR+NSSAR RWL S     G A      S  F+ RL+ + K
Sbjct:  176 SMKWSNIASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKS-----GNAEVSMQTSNLFVQRLKASAK 283

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: F0Y9B4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9B4_AURAN)

HSP 1 Score: 132 bits (331), Expect = 3.300e-32
Identity = 57/80 (71.25%), Postives = 64/80 (80.00%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSARYR 81
            +KWS +A  LPGR+GKQCRERWFNHLDP +KK +WTP ED ILF  Q   G RW EI+K LPGRTENAVKNR+NSSAR R
Sbjct:   75 IKWSVIAAQLPGRIGKQCRERWFNHLDPEIKKGDWTPEEDNILFETQRVHGNRWSEIAKLLPGRTENAVKNRWNSSARKR 154

[Close]

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.800e-32
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 0

Query:    2 LKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEFFGTRWCEISKFLPGRTENAVKNRYNSSA 78
            +KWS VA  LPGR+GKQCRERWFNHLDP++K++ WTP ED ++F AQ   G RWCEI+K LPGRTENAVKNR+NSSA
Sbjct:   77 VKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAKLLPGRTENAVKNRFNSSA 153

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9865.18806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKF8_ECTSI	2.330e-51	71.14	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LA90_9PHAE	2.060e-50	78.69	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A835YLN0_9STRA	2.030e-33	57.01	Homeodomain-like protein n=1 Tax=Tribonema minus T...	[more]
A0A6U4HUA2_9STRA	3.370e-33	66.67	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
D7FRA0_ECTSI	6.330e-33	70.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2R561_9STRA	1.200e-32	75.61	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2BQG7_9STRA	1.720e-32	68.29	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
D7G3Y8_ECTSI	2.490e-32	55.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
F0Y9B4_AURAN	3.300e-32	71.25	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A836C844_9STRA	4.800e-32	71.43	Homeodomain-like protein (Fragment) n=1 Tax=Tribon...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 32..80 e-value: 4.3E-13 score: 59.5
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 34..75 e-value: 6.8E-10 score: 39.0 coord: 3..27 e-value: 4.9E-6 score: 26.6
None	No IPR available	GENE3D	1.10.10.60		coord: 34..99 e-value: 7.6E-15 score: 56.7
None	No IPR available	GENE3D	1.10.10.60		coord: 1..33 e-value: 1.6E-12 score: 49.2
None	No IPR available	PANTHER	PTHR45614:SF1	MYB PROTEIN	coord: 3..299
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 3..299
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 32..82 score: 11.185
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..31 score: 18.311
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 7..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9865	contig	L-elsbetiae_contig9865:459..3391 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9865.18806.1	mRNA_L-elsbetiae_contig9865.18806.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig9865 459..3391 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig9865.18806.1 ID=prot_L-elsbetiae_contig9865.18806.1|Name=mRNA_L-elsbetiae_contig9865.18806.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=672bp
ALKWSDVARLLPGRMGKQCRERWFNHLDPSVKKTEWTPREDEILFNAQEF
FGTRWCEISKFLPGRTENAVKNRYNSSARYRWLGSQPQAGGGAATKKAAS
RAFLDRLRITLKKAPIRRGGGGEPPGPSNNKRSLDQKPPAPSPPHVPAIS
TSRPSPSSKPTKKPKLAPSTPSGKQNKLKRRHLGVTLAGASLKPVKPKRA
ANAMSTKSGGGGGARSAGERMPATLGALASPAVLAGGGGKQPQQQQSRTQ
KQKRRNNSTATNLTAPSSCSSNVVQGNCVGGGAIGESGSTARQKTTSAAM
MHPGKAPPSCIAASNKRKKSSPVQPADKGQGLVTQKGPDRGCRPPPQTGG
KRKGKGNGKWLAVDELKTISVDRGLSVGKGGRGSGDWCRPTLIPGNRAMP
GFNMSGWGRSDERSVSAAGPGAASKAARSEERDNDDRTSALREKRTLAAA
AAATAAAERAAARYMRGEWTLPQPEVPLAPSPPNSTPIAQHHWHRVFGTS
EMFSTASASEASMPGKSSCSGSFSHVDTTYMTNAFSPNRGAGAGVGEIPV
AQRTSPMLLDLSAGGIRNSNSWLKCCAPLQPPGNTVNNNDSNSINGISST
SNNSNNSGGNPLSRAESFVSAFLTDDVRPPPIPFAPPGAWRMNSSMSLGQ
ASRTSSAASMMMMTMFGAGVGA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017930	Myb_dom
IPR009057	Homeobox-like_sf