prot_L-elsbetiae_contig9840.18789.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9840.18789.1
Unique Nameprot_L-elsbetiae_contig9840.18789.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 3.690e-104
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDN 170
            MDDPADAPWRLEAEKIVR+QVQACGL CYDILWTFHRLEVTVTR EGDGP+EEAAYVDSDKLM AIK VNAALE REEELFVLGRHELVVATPGAKD+LTTD+QFKAYKGFE+IVKAGGPFK+KR+LKGKLLERTFDELMIMK GRKVRIPLALVDEVRLP ALVEAGD 
Sbjct:  191 MDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 360          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.990e-71
Identity = 111/171 (64.91%), Postives = 138/171 (80.70%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 171
            MDDP DAPWR EAE+I+R +V+  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM AI+ VN ALE+ EE L+VLGRHEL++ATPGAKDILTTDR+FKA+KGF+++V  G     +R++ GKL ERTFDEL++M+ GRKVRIPLALVDEVRLP A +E G+ +
Sbjct:  201 MDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQW 371          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.210e-32
Identity = 73/178 (41.01%), Postives = 102/178 (57.30%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTR-----VEGDGP-VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLK---GKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGD 169
            MDDP DAPWRL+AE+++R  V   G   YD+ W  H + V +TR     VE +G  V +A  + SD+++   + V  AL   +  L VL R  L V TPGAKD+LTT+R+F+A++G+E+ V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  127 MDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.000e-30
Identity = 72/178 (40.45%), Postives = 100/178 (56.18%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTR-----VEGDGP-VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLK---GKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGD 169
            MDDP DAPWRL AE ++R  V   G   YD+ W  H + V +TR     VE +G  V +A  + SD+++   + V  AL   +  L +L R  L V TPGAKD+LTT+R+F+A++G+E+ V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  237 MDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.910e-28
Identity = 71/174 (40.80%), Postives = 103/174 (59.20%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQA-CGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGP--FKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 171
            +DDP D  WRL+AE++VR  V+   G+  YD+ W    L+V +     +   +E   VD   +  A + +  ALE  +EEL +L RHEL V++ GAK+IL ++R+F+A+KGF+++VK   P    ++  L GKL+ R   E  I   GR VRIP  LV+EVRLP A  E  +N 
Sbjct:  129 LDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLL-----EQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVENL 297          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.980e-25
Identity = 63/176 (35.80%), Postives = 91/176 (51.70%), Query Frame = 0
Query:    2 DDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVT--------------------------RVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIP 151
            DDP DAPWR+E E+I+R+  ++ G    D+ W      VT++                          R E D  V E A   S   ++A   + A  E  + +L VL RHE++V +PG  ++L T RQF A+KGF++IV+   P    R+L+GKLLERT  +  I + G+KV IP
Sbjct:   48 DDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 103 bits (257), Expect = 3.010e-25
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0
Query:   44 RVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAG 168
            R++     + A  VD+ K+ +  K +   L+ +E  L +L RHEL++ATPGA D L T RQF AY+GF++IV+   PF   R L GKL+ER   +L+I K GR V IPL  V  VRLP A  E G
Sbjct:    5 RLQSYNLSDGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.720e-23
Identity = 70/188 (37.23%), Postives = 101/188 (53.72%), Query Frame = 0
Query:    1 MDDPADAPWRLEA----EKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEEL---FVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVK----------AGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 171
            MDDP DAPWRLEA    E++V+E+         D+LW F  +++TVT  E       +A ++     +  + ++  L   E EL     L  H L V TPGA +++TT  QF+AYKGF++ V           AG P K    L G L  RT +E+ + + GR V++P+A+V EVRLP   +E GD +
Sbjct:  101 MDDPLDAPWRLEAAAEIEELVKEKYP--DAQAVDVLWAFSNVQITVTPKEDANVPLSSAVIE-----MLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGK---TLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDKW 278          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.480e-22
Identity = 62/161 (38.51%), Postives = 93/161 (57.76%), Query Frame = 0
Query:   14 EKIVREQVQA-CGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGP--FKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 171
            +++VR  V+   G+  YD+ W    L+V +     +   +E   VD   +  A + +  ALE  +EEL +L RHEL V++ GAK+IL ++R+F+A+KGF+++VK   P    ++  L GKL+ R   E  I   GR VRIP  LV+EVRLP A  E  +N 
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLL-----EQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVENL 167          
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.540e-20
Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 0
Query:    1 MDDPADAPWRLEAEKIVREQVQAC-GLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFK-RKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRL 160
            +DDP D  WR+  + ++RE +    G++ YDI W    L V +   E    +E+        ++   K +   LE  ++EL +L RH L V++ G  D+LT +RQF  +KGFE+ V     F  R+  + G+L+ R   E  I + GR V+IP   V+EVRL
Sbjct:  119 LDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFIENEESGVSMED--------IIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI3.690e-10491.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA4.990e-7164.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA4.210e-3241.01Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA1.000e-3040.45Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA1.910e-2840.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PI76_9STRA1.980e-2535.80Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1DE94_CYCTE3.010e-2545.60Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA8.720e-2337.23Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA1.480e-2238.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D135_9STRA5.540e-2034.57Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 99..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9840contigL-elsbetiae_contig9840:2644..5853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9840.18789.1mRNA_L-elsbetiae_contig9840.18789.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9840 1356..7346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9840.18789.1 ID=prot_L-elsbetiae_contig9840.18789.1|Name=mRNA_L-elsbetiae_contig9840.18789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGP
VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILT
TDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRI
PLALVDEVRLPRALVEAGDNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf