prot_L-elsbetiae_contig9836.18783.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9836.18783.1
Unique Nameprot_L-elsbetiae_contig9836.18783.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig9836.18783.1 vs. uniprot
Match: D7FY04_ECTSI (Putative regulatory protein cII n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY04_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 3.930e-33
Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0 
Query:    2 RYTQMKSQPARNFAFWMGRIESALHKISEKINGMPALKGMAGTPGQPDTQPSILAKVPDFNQFAALSHYYGLPVIALGPHLMGRWDAQTGVM 93
            RYT ++S+PA+NF +WM RIES L +IS+ ++ +  L GMAGTPGQPDT PSILAKVP+FNQF+ALSH+YGLPVIALG +LM  WD +   M
Sbjct:  288 RYTHIRSKPAKNFRYWMTRIESQLREISQDMHKIQGLAGMAGTPGQPDTWPSILAKVPEFNQFSALSHFYGLPVIALGANLMSVWDEEHAAM 379
[Close]
BLAST of mRNA_L-elsbetiae_contig9836.18783.1 vs. uniprot
Match: D7FY09_ECTSI (Putative regulatory protein cII n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY09_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 7.420e-32
Identity = 57/88 (64.77%), Postives = 74/88 (84.09%), Query Frame = 0 
Query:    2 RYTQMKSQPARNFAFWMGRIESALHKISEKINGMPALKGMAGTPGQPDTQPSILAKVPDFNQFAALSHYYGLPVIALGPHLMGRWDAQ 89
            RYT ++S+PA+NF +WM RIE+ L +IS+ ++ +  L GMAGTPGQPDT PSILAKVP+FNQF+ALSH+YGLPVIALG +LMG W+ +
Sbjct:  609 RYTHIRSKPAKNFRYWMTRIENQLREISQDMHKIQGLAGMAGTPGQPDTWPSILAKVPEFNQFSALSHFYGLPVIALGANLMGVWNEE 696
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9836.18783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FY04_ECTSI3.930e-3364.13Putative regulatory protein cII n=2 Tax=Ectocarpus... [more]
D7FY09_ECTSI7.420e-3264.77Putative regulatory protein cII n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9836contigL-elsbetiae_contig9836:1283..1564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9836.18783.1mRNA_L-elsbetiae_contig9836.18783.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9836 1283..1969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9836.18783.1 ID=prot_L-elsbetiae_contig9836.18783.1|Name=mRNA_L-elsbetiae_contig9836.18783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MRYTQMKSQPARNFAFWMGRIESALHKISEKINGMPALKGMAGTPGQPDT
QPSILAKVPDFNQFAALSHYYGLPVIALGPHLMGRWDAQTGVMI
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