prot_L-elsbetiae_contig9806.18760.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9806.18760.1
Unique Nameprot_L-elsbetiae_contig9806.18760.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length64
Homology
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BLAST of mRNA_L-elsbetiae_contig9806.18760.1 vs. uniprot
Match: W2TLB0_NECAM (Atlastin-1 family protein n=2 Tax=Strongylida TaxID=6308 RepID=W2TLB0_NECAM)

HSP 1 Score: 48.5 bits (114), Expect = 6.500e-5
Identity = 23/42 (54.76%), Postives = 26/42 (61.90%), Query Frame = 0 
Query:   14 DHDDEGTLDKLGGADGSAGGFIWKGGHKPHTQGMSIWSEPFI 55
            D DD G+LD L     S  GF W+GG K  T G+ IWSEPFI
Sbjct:   94 DEDDSGSLDWLSVHPDSLKGFSWRGGSKRDTNGILIWSEPFI 135
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BLAST of mRNA_L-elsbetiae_contig9806.18760.1 vs. uniprot
Match: A0A016U540_9BILA (GB1/RHD3-type G domain-containing protein n=4 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016U540_9BILA)

HSP 1 Score: 48.1 bits (113), Expect = 8.970e-5
Identity = 24/50 (48.00%), Postives = 29/50 (58.00%), Query Frame = 0 
Query:   14 DHDDEGTLDKLGGADGSAGGFIWKGGHKPHTQGMSIWSEPFIKQTSPREK 63
            D DD G LD L  +  S  GF W+GG K  T G+ IWSEPFI +    E+
Sbjct:   95 DEDDSGGLDWLTVSPDSLQGFSWRGGSKRDTNGILIWSEPFIMKDKSGEE 144
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9806.18760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
W2TLB0_NECAM6.500e-554.76Atlastin-1 family protein n=2 Tax=Strongylida TaxI... [more]
A0A016U540_9BILA8.970e-548.00GB1/RHD3-type G domain-containing protein n=4 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..63
e-value: 5.5E-8
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9806contigL-elsbetiae_contig9806:4362..5171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9806.18760.1mRNA_L-elsbetiae_contig9806.18760.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9806 4185..5171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9806.18760.1 ID=prot_L-elsbetiae_contig9806.18760.1|Name=mRNA_L-elsbetiae_contig9806.18760.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=64bp
MSWFLLSLEGSKIDHDDEGTLDKLGGADGSAGGFIWKGGHKPHTQGMSIW
SEPFIKQTSPREKD
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