prot_L-elsbetiae_contig963.18607.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig963.18607.1
Unique Nameprot_L-elsbetiae_contig963.18607.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig963.18607.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 2.820e-5
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:    2 TLPRAR--YIGALVQVGRRPAARAEALLKCLPAFPELRPRFEALCPGGLDSRPRLSADAG 59
            T PR R  Y+ ALV VGRR +ARAEA+ KCL AFP+L+P +EA   GG +      +D G
Sbjct:  498 TKPRTRWEYVKALVHVGRRASARAEAV-KCLVAFPDLQPLYEAEFSGGTEGESPPRSDLG 556
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig963.18607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTG3_ECTSI2.820e-551.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig963contigL-elsbetiae_contig963:3049..3765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig963.18607.1mRNA_L-elsbetiae_contig963.18607.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig963 3049..4934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig963.18607.1 ID=prot_L-elsbetiae_contig963.18607.1|Name=mRNA_L-elsbetiae_contig963.18607.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
MTLPRARYIGALVQVGRRPAARAEALLKCLPAFPELRPRFEALCPGGLDS
RPRLSADAGGGGGGGGGTTNDPQEEEEEYEEE
back to top