prot_L-elsbetiae_contig9625.18604.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9625.18604.1
Unique Nameprot_L-elsbetiae_contig9625.18604.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length282
Homology
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BLAST of mRNA_L-elsbetiae_contig9625.18604.1 vs. uniprot
Match: D7FUW9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW9_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 2.650e-40
Identity = 103/230 (44.78%), Postives = 140/230 (60.87%), Query Frame = 0 
Query:   18 GANVSPVPIGGVSPLKLACTLANVEKVRLLL-QLGANPKT-----CLLQIMRDMWKSPSPNDAAAAVLAGAQPPGCARGRLLDIAEMVIAAGDDLELRQPHGPPQSCEHCTPLHFAAGIVSRRLVASLLRAGAVTYGHGRTAGGVVCTPLSWAAACSRPAAAHLLLQAGALESTVDERGRLPLQAVGIYVPSLPPAPEEEVERRAAAVAHALLRGPAFRATSFLWPASSA 241
            G +V PV  GG++PL ++C+ A+V  VR+LL +LG NP T     CLLQ++  + ++   +    + L     P   + R LDIAE++I++G DLE+R            + +H AAG  SRRL+ +LLRAGA T   G+    +  T LS AAA SRP  AHLLLQAGA E+ +D+ GR  L   G  V S+P  PEEE+ RR  AVAH L RGPAFRA S+ WP+++A
Sbjct:  223 GTDVHPVAAGGITPLSISCSSASVAPVRILLTELGMNPVTPMNHGCLLQVILGLCQT---SPVLESFLQLQATPEALKRRRLDIAELLISSGIDLEVRHLGD--------SAVHMAAGSGSRRLMVALLRAGASTSSVGKANDNIFGTALSRAAAHSRPEVAHLLLQAGAHENALDQVGRDALCVAGTLVSSMPATPEEELRRRLLAVAHVLHRGPAFRAMSWRWPSAAA 441
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9625.18604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUW9_ECTSI2.650e-4044.78Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 119..148
e-value: 350.0
score: 8.4
coord: 156..188
e-value: 400.0
score: 8.0
coord: 27..56
e-value: 2.4
score: 17.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 27..53
score: 9.057
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..202
e-value: 2.7E-20
score: 74.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..195
NoneNo IPR availablePANTHERPTHR24189:SF50coord: 16..197
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 16..197
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..195
score: 15.724

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9625contigL-elsbetiae_contig9625:2660..4323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9625.18604.1mRNA_L-elsbetiae_contig9625.18604.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9625 2524..6774 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9625.18604.1 ID=prot_L-elsbetiae_contig9625.18604.1|Name=mRNA_L-elsbetiae_contig9625.18604.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=282bp
MAALNFSRSSMRLLAERGANVSPVPIGGVSPLKLACTLANVEKVRLLLQL
GANPKTCLLQIMRDMWKSPSPNDAAAAVLAGAQPPGCARGRLLDIAEMVI
AAGDDLELRQPHGPPQSCEHCTPLHFAAGIVSRRLVASLLRAGAVTYGHG
RTAGGVVCTPLSWAAACSRPAAAHLLLQAGALESTVDERGRLPLQAVGIY
VPSLPPAPEEEVERRAAAVAHALLRGPAFRATSFLWPASSAPVRKAGEAK
RRPLALRRCCGRRERTPVALSAVWRYANKGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom