prot_L-elsbetiae_contig962.18594.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig962.18594.1
Unique Nameprot_L-elsbetiae_contig962.18594.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig962.18594.1 vs. uniprot
Match: D8LKG7_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG7_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 1.500e-133
Identity = 193/212 (91.04%), Postives = 204/212 (96.23%), Query Frame = 0 
Query:    1 MFLREFNWRLTQEELEGGLEIYERTILRQALKYEPTETRGSRRWLEVLRIIPMPTAVLSRLPRAVVDNVLEKTELAGYFDSKHRVTAEDEPYDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGVQAAWELRLSDLSVESFDDMNVINFRQIFADREFEPGMLQLELEPEAAPMRQTQVATKVDTRWPDEEEEPEPWSE 212
            MFLREFNWRLTQEELEGGLEIYERTILRQALKY+PTETRGSRRWLE LR IPMP AVLSRLP A+VD VLEKTEL+GYF+ +HRVTAEDEPYDDYRGYMLAALK+QRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGV AAWELRLSDLSVESFDDMNV+NFRQIFADR+FEPGMLQLELEPEA PMR+TQVATKVDTRWPDEE+EPEPW+E
Sbjct:  345 MFLREFNWRLTQEELEGGLEIYERTILRQALKYQPTETRGSRRWLETLRRIPMPMAVLSRLPSAIVDAVLEKTELSGYFEDQHRVTAEDEPYDDYRGYMLAALKIQRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGVMAAWELRLSDLSVESFDDMNVLNFRQIFADRDFEPGMLQLELEPEAEPMRETQVATKVDTRWPDEEDEPEPWAE 556
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BLAST of mRNA_L-elsbetiae_contig962.18594.1 vs. uniprot
Match: A0A6H5JLE3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE3_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 1.320e-93
Identity = 150/188 (79.79%), Postives = 158/188 (84.04%), Query Frame = 0 
Query:    1 MFLREFNWRLTQEELEGGLEIYERTILRQALKYEPTETRGSRRWLEVLRIIPMPTAVLSRLPRAVVDNVLEKTELAGYFDSKHRVTAEDEPYDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGVQAAWELRLSDLSVESFDDMNVINFRQIFADREFEPGMLQLELEPEAAPMR 188
            MFLREFNWRLTQEELEGGLEIYERTILRQALKY+PT                    VLSRLP A+VD VLEKTEL+GYF+ +HRVTAEDEPYDDYRGYMLAALK+QRSTMKCCAFDCR EGMIKAHDADLRGVCRIGV AAWELRLSDLSVESFDDMNV+NFRQIFADREFEPGMLQLE+  E A  R
Sbjct:  394 MFLREFNWRLTQEELEGGLEIYERTILRQALKYQPT--------------------VLSRLPSAIVDAVLEKTELSGYFEDQHRVTAEDEPYDDYRGYMLAALKIQRSTMKCCAFDCRPEGMIKAHDADLRGVCRIGVMAAWELRLSDLSVESFDDMNVLNFRQIFADREFEPGMLQLEVRDEGAGRR 561
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BLAST of mRNA_L-elsbetiae_contig962.18594.1 vs. uniprot
Match: A0A7S0CLV9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLV9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.930e-21
Identity = 50/141 (35.46%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:   32 KYEPTETRGSRRWLEVLRIIPMPTAVLSRLPRAVVDNVLEKTELAGYFDSKHRVTAEDEPYDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGVQAAWELRLSDLSVESFDDMNVINFRQIFADREFE 172
            KY P    G+R+WL+ L+ I MP +V+S L R+ +D++L  T L+ YF    R++A DE  D+ + Y+ AAL+++R    C  FD      +  H+ ++R +  +G+   +EL  +D+++  FD+M V+N RQ+F+D  +E
Sbjct:  269 KYFPL-VEGARKWLDTLKNINMPCSVISHLDRSTLDSLLTITGLSDYFADDMRISATDEYDDERQKYLGAALRMERRPDHCMVFDVSPSFSLAVHEMEMRAIAMMGLYHKYELTTADVTMPGFDEMTVMNIRQLFSDVTYE 408
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig962.18594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKG7_ECTSI1.500e-13391.04Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
A0A6H5JLE3_9PHAE1.320e-9379.79Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S0CLV9_9STRA5.930e-2135.46Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 25..162
e-value: 3.9E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR47858FAMILY NOT NAMEDcoord: 36..194
NoneNo IPR availablePANTHERPTHR47858:SF2HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEINcoord: 36..194
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 2..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig962contigL-elsbetiae_contig962:241..6149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig962.18594.1mRNA_L-elsbetiae_contig962.18594.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig962 151..7126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig962.18594.1 ID=prot_L-elsbetiae_contig962.18594.1|Name=mRNA_L-elsbetiae_contig962.18594.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
MFLREFNWRLTQEELEGGLEIYERTILRQALKYEPTETRGSRRWLEVLRI
IPMPTAVLSRLPRAVVDNVLEKTELAGYFDSKHRVTAEDEPYDDYRGYML
AALKVQRSTMKCCAFDCRQEGMIKAHDADLRGVCRIGVQAAWELRLSDLS
VESFDDMNVINFRQIFADREFEPGMLQLELEPEAAPMRQTQVATKVDTRW
PDEEEEPEPWSEGGGGDGRRGGGGGGGGGGLRRRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf