prot_L-elsbetiae_contig9614.18587.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9614.18587.1
Unique Nameprot_L-elsbetiae_contig9614.18587.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length245
Homology
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: D7FYB5_ECTSI (Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB5_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 7.150e-58
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGA--------RGGSSDEGGSEAFLRKALKGCQLPVFLYSAAGNPISPGL 128
            +QFLS+AGVPTILCNGE  EF+SLTT ER+L+V+FAR+ FSGTVLNHVSASALPDVT+LISHSSGKSGGGSRT+ADAVLVMPP SSFG         RGG  DE G+EAFLRKAL GCQLPVFLYSAAG  +  GL
Sbjct:   45 LQFLSEAGVPTILCNGEAGEFASLTTGERKLIVDFARKTFSGTVLNHVSASALPDVTQLISHSSGKSGGGSRTLADAVLVMPPCSSFGGYPGGRETERGG--DERGTEAFLRKALGGCQLPVFLYSAAGAQVGWGL 178          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: A0A496V768_9GAMM (Dihydrodipicolinate synthase family protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496V768_9GAMM)

HSP 1 Score: 125 bits (313), Expect = 1.570e-30
Identity = 91/249 (36.55%), Postives = 118/249 (47.39%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLY---SAAGNPISPGLYARLCADFPTISGILDGSGESELSSALKAALPAR-QLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE 245
            + FL   GV TIL NG TAEF SL+ +ER+ LVE  R+AF G +LN+VSA  L D  +L++HS         + ADA++V+PPY  + A   S  E G  AFL + L   +LP +LY       NPI+P +   L  D   + GI D     E S   KA      Q+ V                      D      LK+G +  VTG  NA PE  + +   F  GD   A   QR LDVW K R+
Sbjct:   62 LSFLQTKGVETILTNGTTAEFPSLSLEERKALVEHCRKAFDGVILNNVSACCLGDCFKLVNHSE--------SYADALVVLPPY--YYA---SVSEKGILAFLAEVLTQSRLPTYLYHFPKQTQNPITPNMVEMLLNDHNNLVGIKDSEANLETSLKFKALKDGTFQVFVGG--------------------DRLAFETLKSGLEGSVTGGGNAFPEFLISISRAFHAGDLETAETMQRALDVWNKFRK 277          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: A0A8J9SE62_9CHLO (Probable 4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SE62_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 3.450e-28
Identity = 84/239 (35.15%), Postives = 118/239 (49.37%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGG--GSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLY---SAAGNPISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQ 234
            +Q+L  AGV +I+ NG TAEFSS+T +ER  + E AR  + G ++N+VSA++  D   L+ HS     G  G +   DA L++PPY   G       E G E +LR+ L+    P++LY   S  GN IS  LY RLC DFP + GI +   +  L+   K A+P  Q+ V                     SDG  L A++ G D  V+ A          +HA     DAG A +A+
Sbjct:   61 LQYLWDAGVRSIVVNGTTAEFSSMTMEERMRITELARAHWPGIIVNNVSAASYHDAQALLQHSQQPMTGLQGEQVSVDAALLLPPYYFAGMA-----EDGLERWLRQVLEVAHQPIYLYNFPSNTGNMISADLYKRLCHDFPLLRGIKNTFDDVPLAKQFKDAMPDHQVYVG--------------------SDGTALEAMREGLDGNVSSAGGCA-----YLHAMLAVADAGAAGEAE 269          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: I0Z2C8_COCSC (4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z2C8_COCSC)

HSP 1 Score: 112 bits (280), Expect = 6.040e-26
Identity = 85/249 (34.14%), Postives = 124/249 (49.80%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLYSA---AGNPISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNG---LSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKK 243
            +Q+L  AGV +I+ NG T EF+S+T +ER  + E AR  + G ++N+VSA++  D   L+ HS     G    V DA L++PPY  F A    + E G E +LR  L+    PVFLY+     GN I P LYARL  DFP + GI +   +  ++   K A+P RQ+ + ++               G VS G G   +SA+ A  DA V G   +       + +  D+ +  G       LD+ A K
Sbjct:   36 LQYLWDAGVRSIIVNGTTGEFTSMTMEERMHITELARAHWPGIMVNNVSAASYQDALALLEHSQQPIAGAEAKV-DAALLLPPYY-FSA----APEEGLERWLRHVLEEAHQPVFLYNFPAHTGNMIGPALYARLAHDFPLLRGIKNTFDDVPMAQQFKYAMPDRQVFIGSD---KMALEAAEAGLDGNVSSGGGSAIVSAMLATVDAAVKGDDESAESAFASVTSWHDQREGMGV------LDIPAAK 269          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: UPI00189621A2 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia transvalensis TaxID=37333 RepID=UPI00189621A2)

HSP 1 Score: 108 bits (271), Expect = 9.580e-25
Identity = 84/245 (34.29%), Postives = 112/245 (45.71%), Query Frame = 0
Query:    4 LSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLYSAAGNP---ISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE 245
            L  AGV ++L NG T EF+SLT  ERR LVEF R  + GT++ HV A AL D   L  H++         +AD +  + PY  F A    + E G E F  + L   Q PV LY+   +    +SPG+ ARL ADFP + G+ D   +   S A KAA    Q+ +                      D  G    + G D  VTGA   + EL VR+ A     D   A   QR  D + + R+
Sbjct:   31 LHDAGVTSLLVNGTTGEFASLTVRERRQLVEFCRSRWRGTLIAHVGACALDDALDLTEHAND--------LADCLAAIAPY--FFAH---APEAGLENFFAQVLGRAQKPVLLYNFPRHTQVNLSPGMVARLAADFPALFGVKDSGKDLTASRAYKAASARIQVFLG--------------------DDRVGPRVRELGVDGVVTGAGGPVAELPVRIAAAVAARDIEAAAHLQRVFDRYTEARK 242          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: A0A496VKE6_9GAMM (Dihydrodipicolinate synthase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VKE6_9GAMM)

HSP 1 Score: 108 bits (270), Expect = 1.310e-24
Identity = 86/250 (34.40%), Postives = 117/250 (46.80%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLY---SAAGNPISPGLYARLC-ADFPTISGILDGSGESELSSALKAALPAR-QLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE 245
            + FL + GV TIL NG TAEF SLT +ER  LVE+ R+ F G +LN++S+  L D  +LI HSS          ADA++V+PP+  + A   +  E G  +FL + L   +LPVFLY       N I+P +   L    +  + GI D     E S   KA      Q+ V                     SD   L  LK+G D  VTG  NA PE  + ++  FD  +   A   Q   D W + R+
Sbjct:   31 LSFLQEKGVETILTNGTTAEFPSLTLEERIALVEYCRKVFKGIILNNISSCCLTDSFKLIKHSS--------YYADALVVLPPF--YYA---NCSETGILSFLTEILNQSELPVFLYHFPKHTQNSITPKMVEILLNKGYKHLVGIKDSQANIETSLKFKALKAGHFQVFVG--------------------SDRLALETLKSGLDGSVTGGGNAFPEFLMSIYRYFDANNLEMAQATQNAFDNWNRFRK 247          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: UPI0008345272 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia miyunensis TaxID=282684 RepID=UPI0008345272)

HSP 1 Score: 107 bits (267), Expect = 4.130e-24
Identity = 82/248 (33.06%), Postives = 115/248 (46.37%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLYSAAGNP---ISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE 245
            +  +  AGV T+L NG T EFSSLT  ERR ++EF R  + G ++ HV A A+ DV  LI+H +         +ADA+ V+ PY  F A   +  E G EAF  + L   + PV LYS   +    +SP + ARL A+FP + G+ D   +  +S   K   P  Q+ +                      D  G+   +   D  VTGA   + EL V + A    GD   A Q QR  D +   R+
Sbjct:   36 LDMVDAAGVRTVLVNGTTGEFSSLTLAERRGVLEFCRGRWRGRLIAHVGAPAVGDVVELIAHGND--------LADALAVIAPY--FFA---APTEAGVEAFFAQVLGSARKPVLLYSFPRHTQTVLSPEMVARLAAEFPLMCGVKDSGKDLTVSQGYKQQTPRLQVFLG--------------------DDRVGVRVRELRLDGVVTGAGGPVAELPVAIAAAVRAGDGQSAQQWQRLFDRYTDHRK 250          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: A0A4U8VUX0_9NOCA (Dihydrodipicolinate synthase n=3 Tax=Nocardia cyriacigeorgica TaxID=135487 RepID=A0A4U8VUX0_9NOCA)

HSP 1 Score: 103 bits (258), Expect = 7.800e-23
Identity = 77/247 (31.17%), Postives = 114/247 (46.15%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLYSAAGNP---ISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKR 244
            ++ L++AGV ++L NG T EF+SLT  ERR +VEF RE +   ++ H  A+A  D   ++ H++          ADAV V+ P+   G         G EAF  + L   Q+P  LY+   +    + P +  RL A  P + G+ D   +  ++ A +   P  Q+LV  +G             G  +SD         G D  VTGA   + EL V + A    GD G A Q Q R D + + R
Sbjct:   28 LELLTEAGVRSVLVNGTTGEFASLTVAERRAVVEFCREKWPSQLIAHAGATAAADAVAMVEHANDH--------ADAVAVIAPFFFAGVC-----VVGVEAFFDQVLASGQIPALLYNFPRHTQLTLDPPMVGRLAARHPLLVGVKDSGKDRSVTRAYQHHAPGLQVLVGDDG------------LGARISD--------LGFDGVVTGAGGPVAELPVAIAAALTAGDRGRADQMQARFDHYTQLR 241          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: UPI0002F12EA6 (dihydrodipicolinate synthase family protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI0002F12EA6)

HSP 1 Score: 101 bits (252), Expect = 6.510e-22
Identity = 75/248 (30.24%), Postives = 117/248 (47.18%), Query Frame = 0
Query:    1 VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLYSA---AGNPISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE 245
            ++ L+ AGV TIL NG + EF+SLT  ERR +VE  R  ++GT++ HV A+A+ DV     H+        +   D + V+ PY  F A    + E G E F  +A+   ++P  +Y+     GNP++P + ARL  + P + G+ D   +  ++ A K   P   + V  +                P   G      + G D  VTGA   + EL V + A    GD   A++ QR  D ++  R+
Sbjct:   27 LELLAGAGVGTILVNGTSGEFASLTLGERRSVVEHCRSGWAGTLIAHVGATAVADVRAAARHA--------QEYVDGLAVIAPY--FFA---DAPESGVEQFFGQAMADVEVPWLVYNFPRHTGNPVTPAMVARLAGEHPLLMGVKDSGKDLAVARAYKTTCPWLSVFVGDDRA--------------PARLG------ELGLDGIVTGAGGPVAELPVAITAASAAGDEASASRWQRVFDTYSDTRK 241          
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Match: UPI001F49025D (dihydrodipicolinate synthase family protein n=1 Tax=Methylomarinum vadi TaxID=438855 RepID=UPI001F49025D)

HSP 1 Score: 102 bits (253), Expect = 1.140e-21
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 0
Query:    8 GVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSASALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSEAFLRKALKGCQLPVFLY---SAAGNPISPGLYARLCADFPTISGILDGSGESELSSALKAALPARQLLVSAEGGGXXXXXXXXXXXGGPVSDGNGLSALKAGADACVTGASNALPELAVRMHACF 222
            GV T++ NG TAEF+SLT DERR ++EF R+ F+GT++N+VSA+ + DV  LI  +  +        AD +L++PPY  + AR    ++ G   F   AL    LP  LY      GN +   L A L     +I GI D SG+ + +   ++  P   + +                     +D      L+ G    VTGA+N LPEL + + A F
Sbjct:  109 GVGTVIANGTTAEFASLTIDERRQVIEFVRKHFAGTIINNVSATCVKDVRELIDETQDR--------ADLLLILPPYY-YSAR----EDNGLCRFFSDALSETPLPAMLYHFPQHTGNFVGVDLVAMLLDRGISIQGIKDSSGDLDNALLYRSNFPGMPVFLG--------------------NDEKAFEVLQKGLTGSVTGAANPLPELLITLQAEF 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9614.18587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYB5_ECTSI7.150e-5875.74Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus ... [more]
A0A496V768_9GAMM1.570e-3036.55Dihydrodipicolinate synthase family protein n=2 Ta... [more]
A0A8J9SE62_9CHLO3.450e-2835.15Probable 4-hydroxy-tetrahydrodipicolinate synthase... [more]
I0Z2C8_COCSC6.040e-2634.144-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=... [more]
UPI00189621A29.580e-2534.29dihydrodipicolinate synthase family protein n=1 Ta... [more]
A0A496VKE6_9GAMM1.310e-2434.40Dihydrodipicolinate synthase family protein n=1 Ta... [more]
UPI00083452724.130e-2433.06dihydrodipicolinate synthase family protein n=1 Ta... [more]
A0A4U8VUX0_9NOCA7.800e-2331.17Dihydrodipicolinate synthase n=3 Tax=Nocardia cyri... [more]
UPI0002F12EA66.510e-2230.24dihydrodipicolinate synthase family protein n=3 Ta... [more]
UPI001F49025D1.140e-2133.03dihydrodipicolinate synthase family protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002220DapA-likeSMARTSM01130DHDPS_2coord: 3..245
e-value: 1.1E-4
score: -54.1
IPR002220DapA-likePFAMPF00701DHDPScoord: 1..237
e-value: 1.5E-8
score: 33.7
IPR002220DapA-likePANTHERPTHR12128DIHYDRODIPICOLINATE SYNTHASEcoord: 1..237
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..244
e-value: 1.3E-31
score: 111.6
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 1..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9614contigL-elsbetiae_contig9614:1496..7410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9614.18587.1mRNA_L-elsbetiae_contig9614.18587.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9614 1496..7410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9614.18587.1 ID=prot_L-elsbetiae_contig9614.18587.1|Name=mRNA_L-elsbetiae_contig9614.18587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
VQFLSKAGVPTILCNGETAEFSSLTTDERRLLVEFAREAFSGTVLNHVSA
SALPDVTRLISHSSGKSGGGSRTVADAVLVMPPYSSFGARGGSSDEGGSE
AFLRKALKGCQLPVFLYSAAGNPISPGLYARLCADFPTISGILDGSGESE
LSSALKAALPARQLLVSAEGGGEGAGRGRGRERGGPVSDGNGLSALKAGA
DACVTGASNALPELAVRMHACFDRGDAGGATQAQRRLDVWAKKRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
IPR013785Aldolase_TIM