prot_L-elsbetiae_contig96.18570.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig96.18570.1
Unique Nameprot_L-elsbetiae_contig96.18570.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length215
Homology
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: D8LTE7_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE7_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 5.720e-106
Identity = 184/219 (84.02%), Postives = 193/219 (88.13%), Query Frame = 0
Query:    1 MARASLFFAALLAVSTGCLAFTPLPSAASIRALG---GPSAS-SAVPRKASRGMLSMAGK-DGEVDRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            M RA L FAALLAVST CLAF   PS AS+RALG   GPS S SAV R+ SRGMLSMA K D E  RQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPG NASRKK INVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLET KE EKKM RD+AR+K++QDAKE+EEDK+DRLLRELS+DTK QKKKPWYGLF
Sbjct:    1 MVRAFLSFAALLAVSTECLAFMG-PSTASVRALGSTQGPSGSTSAVSRQPSRGMLSMASKKDEEAARQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGSNASRKKQINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETSKEAEKKMARDSARLKRLQDAKETEEDKRDRLLRELSDDTKVQKKKPWYGLF 218          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A835Z5U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.610e-42
Identity = 80/151 (52.98%), Postives = 115/151 (76.16%), Query Frame = 0
Query:   64 LSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            L+  ARAARK GPNDRVVE+RKP+GLVLEE+E+G+V+I ++    NASR   +  GDKI+F+SATFG+++WS +G GL+RVQ+A+R+R G +V+LVLE+  E++ K+   AA  K+ +  +E  + K+DRLL+ L EDTK + KK ++GLF
Sbjct:   50 LTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKK-FFGLF 199          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7S2N2W7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N2W7_9STRA)

HSP 1 Score: 144 bits (364), Expect = 7.140e-40
Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 0
Query:   61 DRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            D+ L   ARA+R  G +DRVV+L++P+GLVL ED+ GNVY+  + P GNA+R   +  GD +T  SATFGE++WS +GVGL+RV +AIR+R+GPTV LV E+  ET++++   A       +A++  +DKKD+LL+EL  D K  KK  + GLF
Sbjct:   53 DKDLMRWARASRTAGADDRVVDLKRPLGLVLNEDDDGNVYVETVAPKGNAARTGLVKEGDIVTMCSATFGEQMWSTRGVGLTRVLAAIRVRAGPTVSLVFESPDETQRRVKTSAKAAAAADEARKRAQDKKDQLLKELERDEKRLKKGKFLGLF 206          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A6S8XV32_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XV32_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.690e-39
Identity = 74/154 (48.05%), Postives = 108/154 (70.13%), Query Frame = 0
Query:   61 DRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            D+ L   ARA+R  G +DRVV+L++P+GLVL ED+ GNVY+  + P GNA+R   +  GD +T  SATFG+++WS +GVGL+RV +AIR+R+GPTV LV E+ +ET+KK+   +      ++A++  ++KKD LL+EL  D K  KK  + GLF
Sbjct:   51 DKDLMRWARASRSAGVDDRVVDLKRPLGLVLNEDDDGNVYVETVAPKGNAARTGMVKEGDIVTMCSATFGDQMWSTRGVGLTRVLAAIRVRAGPTVSLVFESSQETQKKVKISSKAAVAAEEARKRAQEKKDMLLKELERDEKRLKKGKFLGLF 204          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A6U1P4I4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P4I4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.320e-39
Identity = 72/150 (48.00%), Postives = 105/150 (70.00%), Query Frame = 0
Query:   61 DRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPW 210
            D +L   +RA RK G NDRV E+ KP+G+VLEEDERG+VY+ +++PGGNA+R   I  GDK+  +SATFGEE+WS +GVG+  V +A+++RSG +VK+VLE+  E+++K    A    +I+ A+ +EE+K  +LL EL       +KK W
Sbjct:   47 DEELRKQSRALRKPGANDRVAEVNKPLGMVLEEDERGDVYVADVIPGGNAARTGKIFQGDKVVMISATFGEEVWSTRGVGIGSVMNAVKVRSGNSVKVVLESTAESKQKAQEAAMTAAEIRAARAAEEEKNRQLLAELDATDDALRKKKW 196          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7R9W701_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W701_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.140e-37
Identity = 90/214 (42.06%), Postives = 127/214 (59.35%), Query Frame = 0
Query:    7 FFAALLAVSTGCLAFTPLPSAASIRALGGPSASSAVPRKASRGMLSMAGKDGEVDRQLSN------MARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            F  A LA++  C+AF P  +            ++A P   SRG +  AG D  V   ++N        +++R  G +DRVVELR+P+GLVL ED  GNVY+  + P GNA+R   +  GD +T  SATFG+++WS +G GL+RV +AIR+R+GPTVKLV E+  ET+ K    A   K  +DA+   + K+D+LL EL +D K  KK  + GLF
Sbjct:    5 FLLAPLALAVSCVAFAPASTG-----------NAAAP---SRGQV--AGGDFSVALNMANENDLRRWEKSSRAAGASDRVVELRRPLGLVLNEDGDGNVYVETVAPRGNAARTGEVREGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTSETQNKAKMGAKAAKAAEDARAKAQAKRDQLLDELEQDEKRLKKGKFLGLF 202          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7S4IT66_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT66_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.230e-37
Identity = 87/205 (42.44%), Postives = 127/205 (61.95%), Query Frame = 0
Query:   12 LAVSTGCLAFTPLPSAASIRALGGPSASSAVPRKA--SRGMLSMAGKDGEVDRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            LA++   +AF P        ++GG +  S  P  A  S   LSMA ++      L    +A+R  G  DRVVELR+P+GLVL +D  GNVY+  + P GNA+R   +  GD +T  SATFG+++WS +G GL+RV +AIR+R+GPTVKLV E+  E++ K+ R A  +K  ++A+ + + K+D+LL EL +D K  KK  + GLF
Sbjct:   10 LALAASSMAFVPT-------SIGGATVLSQCPVAAADSTVALSMASEN-----DLRRWEKASRAAGAEDRVVELRRPLGLVLNDDGNGNVYVETVAPRGNAARTGEVKEGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTAESKTKVKRGAKAVKAAEEARANAQAKRDQLLDELEQDEKKLKKGKFLGLF 202          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7S0KBW8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBW8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.600e-37
Identity = 73/147 (49.66%), Postives = 101/147 (68.71%), Query Frame = 0
Query:   61 DRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKK 207
            D+ L   ARA+R    +DRVVEL++P+GLVL+ED+ GNVY+  + P GNA+R   +  GD +   SATFGE++WS +GVGL+RV +AIR+R+GPTV LVLE+  E E+K    A   K  ++AK   ++KKD+LL+EL  D    KK
Sbjct:   52 DKDLLRWARASRSASADDRVVELKRPLGLVLDEDDSGNVYVETVAPRGNAARTGQVKEGDILVMCSATFGEQLWSTRGVGLTRVLAAIRVRAGPTVTLVLESPSERERKSKMTAKAAKATEEAKVRAQEKKDQLLKELQADEDRLKK 198          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7S2RUI5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RUI5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.230e-36
Identity = 76/165 (46.06%), Postives = 105/165 (63.64%), Query Frame = 0
Query:   50 MLSMAGKDGEVDRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            ML+MA +D   D  +   +R+ R    +DRVVEL++P+GLVL+EDE GNV +  + P GNA+R   +  GD +T  SATFG+++WS +G GL RV +AIR+R+GPTVKL LE+  E+  K+       K   DA+   + KKD LL+EL  D K  KK  + GLF
Sbjct:   35 MLNMAKEDNGFD--MMRFSRSQRSANVDDRVVELKRPLGLVLDEDENGNVVVETVAPRGNAARTGQVKEGDIVTMCSATFGDQMWSTRGAGLQRVLAAIRVRAGPTVKLALESSSESTNKVKSSTKAAKAAVDARLRAQQKKDELLKELESDEKKLKKGKFLGLF 197          
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Match: A0A7S0ATU5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATU5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.230e-36
Identity = 90/210 (42.86%), Postives = 119/210 (56.67%), Query Frame = 0
Query:    5 SLFFAALLAVSTGCLAFTPLPSAASIRALGGPSASSAVPRKASRGMLSMAGKDGEVDRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSEDTKTQKKKPWYGLF 214
            SLF   L  +   C AF+P  S  S                +S   LSMA      D  L   AR+AR  G +DRVVELR+P+G+VL ED  GNVY+  +   GNA+R   +  GD +T  S+TFG+++WS +G GLSRV SAIR+R+GPTVKL LE+ KE   K  R A  ++  + A+   + KKD LL EL +D +  KK  + GLF
Sbjct:    8 SLFAVLLALLGASCSAFSPAVSTTS---------------SSSTTALSMAN-----DNDLLRWARSARTAGIDDRVVELRRPLGVVLGEDADGNVYVETVAARGNAARTGEVREGDFVTMCSSTFGDDMWSCRGAGLSRVLSAIRLRAGPTVKLALESSKEGNVKAQRTAKNLQAEEAARAKAQAKKDSLLEELQKDEQRLKKGKFLGLF 197          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig96.18570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE7_ECTSI5.720e-10684.02PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z5U3_9STRA1.610e-4252.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2N2W7_9STRA7.140e-4048.70Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S8XV32_9STRA2.690e-3948.05Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U1P4I4_9STRA9.320e-3948.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9W701_9STRA1.140e-3742.06Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4IT66_9STRA3.230e-3742.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0KBW8_9STRA8.600e-3749.66Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2RUI5_9STRA2.230e-3646.06Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S0ATU5_9STRA2.230e-3642.86Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..204
NoneNo IPR availableGENE3D2.30.42.10coord: 77..164
e-value: 9.0E-9
score: 37.2
NoneNo IPR availablePANTHERPTHR47661FAMILY NOT NAMEDcoord: 60..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.912
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR001478PDZ domainPFAMPF00595PDZcoord: 84..158
e-value: 1.7E-5
score: 25.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 87..149
score: 9.25
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 86..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig96contigL-elsbetiae_contig96:6796..13892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig96.18570.1mRNA_L-elsbetiae_contig96.18570.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig96 5432..13897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig96.18570.1 ID=prot_L-elsbetiae_contig96.18570.1|Name=mRNA_L-elsbetiae_contig96.18570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MARASLFFAALLAVSTGCLAFTPLPSAASIRALGGPSASSAVPRKASRGM
LSMAGKDGEVDRQLSNMARAARKVGPNDRVVELRKPMGLVLEEDERGNVY
IVEIVPGGNASRKKTINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRI
RSGPTVKLVLETDKETEKKMNRDAARMKKIQDAKESEEDKKDRLLRELSE
DTKTQKKKPWYGLF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf