prot_L-elsbetiae_contig9593.18566.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9593.18566.1
Unique Nameprot_L-elsbetiae_contig9593.18566.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
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BLAST of mRNA_L-elsbetiae_contig9593.18566.1 vs. uniprot
Match: A0A6H5JHZ8_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ8_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.470e-39
Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 0 
Query:   55 MTTPVYVLKPVSSGYKEVLLPPGTRFVGRSAATGIKSPVVSRKHVEVAVERGRCKVRYCAKYVSEVKLNETPVKKEWVEFPVGGRLTLLTNVAE 148
            MTTP+YVLKP+SSGYKEVLLPPGT+F+GRS ATGI+S VVSRKH+EVAVE   CKVRYCAK+ SEVK++   VKKEWV FPVGGRL  L N  E
Sbjct:    1 MTTPLYVLKPISSGYKEVLLPPGTKFIGRSVATGIQSQVVSRKHIEVAVEGDVCKVRYCAKFKSEVKIDNALVKKEWVPFPVGGRLEFLENPVE 94
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9593.18566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHZ8_9PHAE3.470e-3974.47RING-type domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 54..152
e-value: 2.1E-9
score: 39.1
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 55..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9593contigL-elsbetiae_contig9593:2832..6367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9593.18566.1mRNA_L-elsbetiae_contig9593.18566.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9593 2832..6368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9593.18566.1 ID=prot_L-elsbetiae_contig9593.18566.1|Name=mRNA_L-elsbetiae_contig9593.18566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
EQSQSRREGGSWFALSSRPRRNCDITEQPASLWQTFEGHDFRWQGCRVHH
NETRMTTPVYVLKPVSSGYKEVLLPPGTRFVGRSAATGIKSPVVSRKHVE
VAVERGRCKVRYCAKYVSEVKLNETPVKKEWVEFPVGGRLTLLTNVAEVS
AVEPRLLKKCKSCCDCLIGLPPSCACGPTRFHKATVYICVNTRIVRISEA
NYRCCCDIILTSEVPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_dom_sf