prot_L-elsbetiae_contig9563.18549.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9563.18549.1
Unique Nameprot_L-elsbetiae_contig9563.18549.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
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BLAST of mRNA_L-elsbetiae_contig9563.18549.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.360e-6
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    1 MVNLRDKKCNYAGCTTHPTYGLAGSKKPGFCSKHAPKGMVYL 42
            M+++R K C++ GCTT   +G+ GSKK  FCS+HA  GMV L
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMVDL 42
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9563.18549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCH9_ECTSI1.360e-652.38EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9563contigL-elsbetiae_contig9563:2513..2902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9563.18549.1mRNA_L-elsbetiae_contig9563.18549.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9563 2513..2902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9563.18549.1 ID=prot_L-elsbetiae_contig9563.18549.1|Name=mRNA_L-elsbetiae_contig9563.18549.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
MVNLRDKKCNYAGCTTHPTYGLAGSKKPGFCSKHAPKGMVYLKGSSSRTS
GHADGNGGRGCGGSALDADDTVRCAGFGQKRSINLFPSSSASTGTSSGNS
RGGTKRPRQTPSSIPAASTPAESAEDESVT
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