prot_L-elsbetiae_contig9562.18548.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9562.18548.1
Unique Nameprot_L-elsbetiae_contig9562.18548.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 5.150e-38
Identity = 77/105 (73.33%), Postives = 89/105 (84.76%), Query Frame = 0
Query:   45 MDRGRLNTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKTKLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGI 149
            M+RGR++T+TLDRVSRLAS  GDAASI +S+  I WDI LVD+DVRKL+A  +  +K TYAGTSNET QGRAFL+KQLD LMKEKAQYKEK+ ALLQLQD LPGI
Sbjct:    1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGI 105          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 2.650e-37
Identity = 77/105 (73.33%), Postives = 89/105 (84.76%), Query Frame = 0
Query:   45 MDRGRLNTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKTKLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGI 149
            M+RGR++T+TLDRVSRLAS  GDAASI +S+  I WDI LVD+DVRKL+A  +  +K TYAGTSNET QGRAFL+KQLD LMKEKAQYKEK+ ALLQLQD LPGI
Sbjct:    1 MERGRMDTTTLDRVSRLASNVGDAASISVSLGQIDWDIKLVDQDVRKLLAAVQGTSKQTYAGTSNETEQGRAFLQKQLDGLMKEKAQYKEKRLALLQLQDELPGI 105          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.310e-33
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0
Query:   45 MDRGRLNTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKTKL-TYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGI 149
            M+R R++TSTLDRVSRLAS  GDA SIQ+S+ A++WDI LVD DVRKL++C + K    TYAGTSNET QGRAFLKKQLD LM EKAQYKEK+ ALLQLQ  LP +
Sbjct:    1 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPNL 106          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 5.580e-33
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0
Query:   45 MDRGRLNTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKTKL-TYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGI 149
            M+R R++TSTLDRVSRLAS  GDA SIQ+S+ A++WDI LVD DVRKL++C + K    TYAGTSNET QGRAFLKKQLD LM EKAQYKEK+ ALLQLQ  LP +
Sbjct: 1144 MERTRMDTSTLDRVSRLASNVGDATSIQVSLGALEWDIKLVDGDVRKLLSCLQGKPGAQTYAGTSNETEQGRAFLKKQLDGLMAEKAQYKEKRLALLQLQQELPKL 1249          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 4.180e-22
Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   45 MDRGRLNTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKTKLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLP 147
            MDR R++T+  +RVSR+AS A DA SI +S+ A   DI LVD +VR+ +A      K TYAG +NETA G ++LKKQL+ LMKEKAQ+KEKK AL QLQ  LP
Sbjct:    1 MDRSRMSTNAFERVSRVASGAKDAESIAVSLGATDLDIELVDNEVRRALAAIHGTKKETYAGRTNETAAGVSYLKKQLERLMKEKAQFKEKKLALQQLQQELP 103          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: A0A6H5JNX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX4_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.620e-18
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 0
Query:   54 TLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKL--VACQESKTKLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGIRCAQESNRTQKITFNRRTCDHGPIPPPSLPCPP 182
            TL    R +S + +AASI +S+ AI WD++LVDKDVR+L  V   +     TYAG SN T +G+AFL+ Q+D LM+EKAQYKEK+ AL+Q Q  L                    + +     PPSLP  P
Sbjct:    2 TLPPRDRQSSVSDEAASIAVSLAAIDWDVALVDKDVRRLLEVLQDDGSEGKTYAGRSNSTPEGKAFLQNQVDGLMREKAQYKEKRMALMQRQQELXXXXXXXXXXXXSSAGVANSSSELPKATPPSLPQTP 132          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.800e-15
Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 0
Query:   54 TLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKL--VACQESKTKLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQ 141
            TL   +R +S + +AAS  +S+ AI WD++LVDKDVR+L  V   +     TYAG SN T QG+AFL+ Q+D LM+EKAQYKEK+  L+Q
Sbjct:    2 TLPARARQSSVSDEAASTAVSLAAIDWDVALVDKDVRRLLEVLQDDGAEGKTYAGRSNSTPQGKAFLQNQVDGLMREKAQYKEKRMVLMQ 91          
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 7.310e-5
Identity = 35/94 (37.23%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   73 ISIDAIQWDISLVDKDVRKLVACQESKTKLT-YAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDN---LPGIRCAQESNRTQKIT 162
            + + A+ W+I+ VD +VR+++   + K++ + YAG S +       L+K LD LM+EK +YKEK+ ALL+LQD+    PG   A +  + Q+ T
Sbjct:  100 LPVVAVDWEIARVDGEVREVLGALQGKSEGSPYAGKSKDV------LEKTLDDLMREKTEYKEKRLALLELQDDQLKAPGSDAADKPQQPQEKT 187          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9562.18548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JT29_9PHAE5.150e-3873.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI2.650e-3773.33Similar to Uncharacterized protein conserved in ba... [more]
D7FN21_ECTSI1.310e-3369.81Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE5.580e-3369.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0Z5_9PHAE4.180e-2257.28PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JNX4_9PHAE1.620e-1842.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF9_ECTSI3.800e-1552.22Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JTS4_9PHAE7.310e-537.23PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..205
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9562contigL-elsbetiae_contig9562:4958..6055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9562.18548.1mRNA_L-elsbetiae_contig9562.18548.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9562 3..6261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9562.18548.1 ID=prot_L-elsbetiae_contig9562.18548.1|Name=mRNA_L-elsbetiae_contig9562.18548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
MALIVVPVVWLFSRARQPRARQPRSVFSLLGSWITAAGTYTGSIMDRGRL
NTSTLDRVSRLASTAGDAASIQISIDAIQWDISLVDKDVRKLVACQESKT
KLTYAGTSNETAQGRAFLKKQLDVLMKEKAQYKEKKQALLQLQDNLPGIR
CAQESNRTQKITFNRRTCDHGPIPPPSLPCPPPVLSSRSLMTGSCVSDLR
PSTCS*
back to top