prot_L-elsbetiae_contig9539.18525.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9539.18525.1
Unique Nameprot_L-elsbetiae_contig9539.18525.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length79
Homology
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BLAST of mRNA_L-elsbetiae_contig9539.18525.1 vs. uniprot
Match: D7G448_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G448_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 6.730e-27
Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:   26 PPAPLENKGVMFVVYRRLNAGRSLLLVTSYDGEDTLVGVGLFFCLKYGGRYIP 78
            PPAPL+NKGVMFVVYRRLNAGRSLLL T YDGEDT VGVGL FC KYGGRYIP
Sbjct:   19 PPAPLKNKGVMFVVYRRLNAGRSLLLATLYDGEDTSVGVGLVFCSKYGGRYIP 71
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9539.18525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G448_ECTSI6.730e-2788.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9539contigL-elsbetiae_contig9539:6961..7318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9539.18525.1mRNA_L-elsbetiae_contig9539.18525.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9539 6648..7667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9539.18525.1 ID=prot_L-elsbetiae_contig9539.18525.1|Name=mRNA_L-elsbetiae_contig9539.18525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp
MKPNSGYGQAGLHLASQFMRREKVDPPAPLENKGVMFVVYRRLNAGRSLL
LVTSYDGEDTLVGVGLFFCLKYGGRYIP*
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