prot_L-elsbetiae_contig9531.18516.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9531.18516.1
Unique Nameprot_L-elsbetiae_contig9531.18516.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length216
Homology
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BLAST of mRNA_L-elsbetiae_contig9531.18516.1 vs. uniprot
Match: A0A6H5JFD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 7.400e-46
Identity = 139/203 (68.47%), Postives = 144/203 (70.94%), Query Frame = 0 
Query:    8 AVLQLGMQFEAMGTSSQFQPQXXXXXXXXXXXXXX-YQTPFDQGVYQQYDQSGFPLPQQXXXXXXXXXXXXXXXXH------------TGPF-------GDAAGMAGGGIDLFGS------------PQXXXXXXXXXXXXPPVETCTDLAKASVDPWDMARSGMVNIEDITDTKHLPAVEVKPFTNDHRPLADLVREAPPKV 178
            AVLQLGMQFEAMG + QFQ Q     XXXXXXXXX YQTPFD GVYQQYDQSGFPLPQQXXXXXXXXXXXXXXXX             TGPF         A G AGGG+D  G               XXXXXXXXX    P  TCT L+KAS DPWDMARSGMVNI+DITDTKHLPAVEVKPFT+DHRPLADLVREAPPKV
Sbjct:  361 AVLQLGMQFEAMGMNPQFQQQPQHQPXXXXXXXXXQYQTPFDDGVYQQYDQSGFPLPQQXXXXXXXXXXXXXXXXXXXXXXXXHAMPATGPFDAPSVGFSGAPGTAGGGVDFAGGGFLQPTXXXXXXXXXXXXXXXXXSDGSPAVTCTTLSKASTDPWDMARSGMVNIDDITDTKHLPAVEVKPFTDDHRPLADLVREAPPKV 563
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9531.18516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFD8_9PHAE7.400e-4668.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9531contigL-elsbetiae_contig9531:448..6190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9531.18516.1mRNA_L-elsbetiae_contig9531.18516.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9531 447..6190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9531.18516.1 ID=prot_L-elsbetiae_contig9531.18516.1|Name=mRNA_L-elsbetiae_contig9531.18516.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp
PGSAGDPAVLQLGMQFEAMGTSSQFQPQQQQQQFVQQQQQQQYQTPFDQG
VYQQYDQSGFPLPQQQQQQQPYNPPPQQQQQHTGPFGDAAGMAGGGIDLF
GSPQQQQGGAATTAGGPPVETCTDLAKASVDPWDMARSGMVNIEDITDTK
HLPAVEVKPFTNDHRPLADLVREAPPKVNNAVMIDRPEPPPTHMAVAIVP
FQAPGQQQQQQQQGGF
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