prot_L-elsbetiae_contig953.18512.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig953.18512.1
Unique Nameprot_L-elsbetiae_contig953.18512.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length260
Homology
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: D8LLX0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX0_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 1.930e-95
Identity = 198/253 (78.26%), Postives = 210/253 (83.00%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEEGGLSLLLSLAQPPPRAPRTVDGAEAAAIAGSPEESLAAGGIGXXXXXXXXXXDWEVFASAVKLLRQACMLSANRSDLLSLK 253
            EFFRGSLSKNPL+ TDIMPSA   XXXXXXXXXXXXXXXXX      +   ISGVAEATMRNLRD IATDLDMADAA++LELIVCGNIVGLDIP+RVVQHELWRPHILETTADDYSSDCEAE+LPAMMVTYRLAGVDGEATEEVVDSL DSDSA +QDPE KFGIARD+AEEGGLSLLL+LAQPP      V+  EAAA   SPE  LAA G G          DWEVFA AVKLLR++CMLSANRSDLLSLK
Sbjct: 6358 EFFRGSLSKNPLYSTDIMPSAPAAXXXXXXXXXXXXXXXXXXXXXXXSPSAISGVAEATMRNLRDKIATDLDMADAADLLELIVCGNIVGLDIPVRVVQHELWRPHILETTADDYSSDCEAESLPAMMVTYRLAGVDGEATEEVVDSLADSDSAADQDPEVKFGIARDIAEEGGLSLLLTLAQPPAGPSAAVE-EEAAA---SPE-GLAASGSG----------DWEVFALAVKLLRRSCMLSANRSDLLSLK 6595          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 6.700e-95
Identity = 180/256 (70.31%), Postives = 196/256 (76.56%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPT-ISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEEGGLSLLLSLAQPPPRAPRTVDGAEAAAIAGSPEESLAAGGIGXXXXXXXXXXDWEVFASAVKLLRQACMLSANRSDLLSLKVS 255
            EFFRGSLSKNPL+ TDIMPSA                    +   GS+SP+ ISGVAEATMRNLRD IATDLDMADAA++LELIVCGNIVGL+IP+RVVQHELWRPHILETTADDYSSDCEAE+LPAMMVTYRLAGVDGEATEEVVDSL DSDSA +QDPE KFGIARD+AEEGGLSLLL+LAQPP         A    +  SPE  L+A G G          DWEVFA AVKLLR++CMLSANRSDLLSLK S
Sbjct: 7374 EFFRGSLSKNPLYSTDIMPSAPAPA----------------ANAGGSSSPSAISGVAEATMRNLRDKIATDLDMADAADLLELIVCGNIVGLNIPVRVVQHELWRPHILETTADDYSSDCEAESLPAMMVTYRLAGVDGEATEEVVDSLADSDSAADQDPEVKFGIARDIAEEGGLSLLLTLAQPP-----AGPSAAEEEVENSPE-GLSASGSG----------DWEVFALAVKLLRRSCMLSANRSDLLSLKAS 7597          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.620e-53
Identity = 121/253 (47.83%), Postives = 146/253 (57.71%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEEGGLSLLLSLAQPPPRAPRTVDGAEAAAIAGSPEESLAAGGIGXXXXXXXXXXDWEVFASAVKLLRQACMLSANRSDLLSLK 253
            EFFRGSL  NP+   DI                        S  AG +      V E T+R+LR  IA DLDMADA E+LEL+VCG IV LDIPIRVVQ ELWRPH+L   A+DY SDC+AE LP M VTYRLAGVDGEATEEVV++LVDS +   QDPE +F     + E GGL LLL+LA PP    + +   E     GS   S  A  +G            EV   A++LLR  CML +NR+ L+++K
Sbjct: 5388 EFFRGSLPTNPIFSWDIA-----------------------SADAGRSGGAPGEVPEPTLRDLRARIAKDLDMADAMELLELLVCGRIVSLDIPIRVVQAELWRPHVLSINANDYDSDCDAEVLPPMTVTYRLAGVDGEATEEVVETLVDSAAQASQDPEQQFACTSAIGENGGLPLLLALAHPPQLPHQHLSTEE-----GSEGGSTIAATVGAMRA--------EVCTLALRLLRHCCMLHSNRARLVAIK 5604          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S2MFN7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MFN7_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.730e-31
Identity = 75/183 (40.98%), Postives = 102/183 (55.74%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIAR----DVAEEGGLSLLL 179
            EFFRG+L KNPL   D++  +                     G A  A P         M ++R  +A DLDM DAAE+LEL+VC  IV   + +R+VQ +LWR H+++     Y+SDC+A  LP M+VTYRLAGVDGEATEE +D + D ++  ++DPE  F +       + E GGL  LL
Sbjct:  155 EFFRGALPKNPLTLNDLVLHSQQ------------------QGGADGADPI--------MGDIRSKVAGDLDMQDAAELLELLVCERIVNPGLSVRLVQDQLWRSHVMDLDTGGYTSDCDAVQLPPMLVTYRLAGVDGEATEETLDVVEDPEALRQEDPEKTFAVTSVLRTQLKEGGGLRGLL 311          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S2MG52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG52_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.850e-30
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGI 165
            EFFRG+L KNPL   D++  +                     G A  A P         M ++R  +A DLDM DAAE+LEL+VC  IV   + +R+VQ +LWR H+++     Y+SDC+A  LP M+VTYRLAGVDGEATEE +D + D ++  ++DPE  F +
Sbjct:  155 EFFRGALPKNPLTLNDLVLHSQQ------------------QGGADGADPI--------MGDIRSKVAGDLDMQDAAELLELLVCERIVNPGLSVRLVQDQLWRSHVMDLDTGGYTSDCDAVQLPPMLVTYRLAGVDGEATEETLDVVEDPEALRQEDPEKTFPV 293          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S0KAM1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAM1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.550e-30
Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 0
Query:   53 SGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEEG 173
            SG AE  M +LR  IATDL M D+AE+LEL+V G I+ L + +RVVQ   WR H+L+     YSSD    ++P M+VTYRLAGVDGEATE+VV++L D + +G  DPE +F I RD+AE G
Sbjct:  289 SGEAEPLMSDLRRHIATDLQMTDSAELLELLVGGKIIDLALKVRVVQQVHWRKHVLKYYETGYSSDSSISSMPPMVVTYRLAGVDGEATEDVVEALSDPEGSGGIDPEVEFAITRDIAEAG 409          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S2LBI9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBI9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.290e-21
Identity = 78/233 (33.48%), Postives = 102/233 (43.78%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVA-----EATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETT---------------------------------------------------ADD----YSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEEG 173
            EFFRGSLSKNP+  + +                        +     +S + S +A     E  M +LR  IA DL M D+AE+LEL+V G I+ + + +RVVQ  LWR H+L+                                                     A+D    YSSD    +LP M+VTYRLAGVDGEATE+VV  LVD +   + D E +F I R VAE G
Sbjct:  185 EFFRGSLSKNPILLSSLRHQ----------HPQQNNRSSAITAAVDVSSSSASNIANNDNNEPLMSDLRQHIANDLQMGDSAELLELLVAGKIIDMGLKVRVVQQVLWRRHVLDNNGGGGSGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSGGXXXXXXXXXDANDPNGGYSSDASVTSLPPMVVTYRLAGVDGEATEDVVSELVDGEEKEKMDEEKEFAITRIVAEAG 407          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S3QBC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBC4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.110e-20
Identity = 76/217 (35.02%), Postives = 107/217 (49.31%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEA--TMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSS-------------------------DCEAEALPAMMVTYRLAGVDGEATEEVVD--SLVDSDSAGEQDP---------EAKFGIARDVAEEGGLSLLL 179
            EFFRGSLSKNP   + ++                           GS+S   SG AE   T+++LR  IA DL M D+AEMLEL+V   I+ +++ +RVV   LW+ H++E T   +S                          +    +LPAM+VTYRLAGVDGEATE++V+   LVD D+  + D          E ++GI R V +  G+ +LL
Sbjct: 1069 EFFRGSLSKNPTLISSLIVE-------------------------GSSS---SGTAEKEPTVKDLRQHIANDLQMGDSAEMLELLVSKKILDMNLKLRVVFQTLWKTHVIENTTAVHSESSFRQLMSGSGLGEGALLSRSGIDENTPVSSLPAMVVTYRLAGVDGEATEDIVEVGDLVDPDAPPDNDTSRAEYEKQMEKEYGITRAVTKGRGVGVLL 1257          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S1TPZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPZ0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.620e-20
Identity = 48/117 (41.03%), Postives = 76/117 (64.96%), Query Frame = 0
Query:   56 AEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVDSDSAGEQDPEAKFGIARDVAEE 172
            A+ T+++L+  IAT L+M D+ E+LEL+  G IVG  +P+R+V   +W+PH+        +++ E   +P M VTYRLAGVDGEATEE +D L D ++A ++ P  ++ I   +A +
Sbjct:   17 ADPTVQDLKRYIATTLEMPDSTELLELLCGGKIVGATLPLRLVYERVWKPHVR-------TANPEGAYVPPMSVTYRLAGVDGEATEEQLDELEDDNAAADKSPAERYAITEVLAAD 126          
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Match: A0A7S3L477_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L477_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.840e-20
Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 0
Query:    1 EFFRGSLSKNPLHYTDIMPSAXXXXXXXXXXXXXXXXXXXXSGPAGSASPTISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQHELWRPHILE--TTADD---------------------------YSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVD--------SDSAGEQDPEAKFGIARDVAEEGGLSLLL 179
            EFFRG+LS NP+    +  S+                         +A+    G  E T+ +LR  IA DL M D+AE++E+++   IV +D+ +RV+   +WR H+LE  TT+ D                            ++D  +  LP M+  YRLAGVDGEATE+ VD +VD        S  A E   E +FG+ R +AE  G  +LL
Sbjct:  422 EFFRGNLSTNPVDLDLLRRSSS------------------------NAAAQTDGTYEPTVGDLRQHIANDLQMGDSAELIEILIANKIVSIDLKLRVIHQVVWRQHLLENSTTSRDGGQSFVSMGSGISMIFSSGRPGRGHQAITTDTPSSQLPPMIAVYRLAGVDGEATEDTVDEVVDPEAPDADASPEAREAQIEKEFGLTRLIAEGRGFYVLL 613          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig953.18512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX0_ECTSI1.930e-9578.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J981_9PHAE6.700e-9570.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9Y3_9STRA2.620e-5347.83E3 ubiquitin-protein ligase UBR4-domain-containing... [more]
A0A7S2MFN7_9STRA4.730e-3140.98Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2MG52_9STRA2.850e-3041.82Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0KAM1_9STRA7.550e-3054.55Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2LBI9_9STRA1.290e-2133.48Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S3QBC4_9STRA2.110e-2035.02Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S1TPZ0_9STRA4.620e-2041.03Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3L477_9STRA6.840e-2032.41Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025704E3 ubiquitin ligase, UBR4PFAMPF13764E3_UbLigase_R4coord: 57..181
e-value: 6.6E-23
score: 80.8
NoneNo IPR availablePANTHERPTHR21725:SF1E3 UBIQUITIN-PROTEIN LIGASE UBR4coord: 1..253
NoneNo IPR availablePANTHERPTHR21725PUSHOVER/RETINOBLASTOMA-ASSOCIATED FACTOR 600coord: 1..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig953contigL-elsbetiae_contig953:15602..17780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig953.18512.1mRNA_L-elsbetiae_contig953.18512.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig953 15602..17780 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig953.18512.1 ID=prot_L-elsbetiae_contig953.18512.1|Name=mRNA_L-elsbetiae_contig953.18512.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=260bp
EFFRGSLSKNPLHYTDIMPSAAAGGGGSGGGGGGGAAAAAASGPAGSASP
TISGVAEATMRNLRDTIATDLDMADAAEMLELIVCGNIVGLDIPIRVVQH
ELWRPHILETTADDYSSDCEAEALPAMMVTYRLAGVDGEATEEVVDSLVD
SDSAGEQDPEAKFGIARDVAEEGGLSLLLSLAQPPPRAPRTVDGAEAAAI
AGSPEESLAAGGIGFGAGSGSGTGDWEVFASAVKLLRQACMLSANRSDLL
SLKVSKYGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025704E3_Ub_ligase_UBR4