prot_L-elsbetiae_contig9495.18477.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9495.18477.1
Unique Nameprot_L-elsbetiae_contig9495.18477.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig9495.18477.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.510e-16
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:    1 EVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRVGAQTGYALHAAVRRGHVDIVSDLVDSGASLVAKDTLG 71
            E+LTS Q AELL+A LE AAAKG++DLAQRLVR GA+ G ALH AV  GH +IVSDL++S ASL A D  G
Sbjct:    7 EILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDG 77
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BLAST of mRNA_L-elsbetiae_contig9495.18477.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 6.670e-14
Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 0 
Query:    1 EVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRVGAQTGYALHAAVRRGHVDIVSDLVDSGASLVAKDTLG 71
            EVLT+  WAE+L+ PLE AAA+G+  L Q+L+R GA  G ALHAAVR GH ++V++L++ GA +  KDT G
Sbjct:   39 EVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRG 109
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BLAST of mRNA_L-elsbetiae_contig9495.18477.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.070e-7
Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0 
Query:    4 TSGQWAELLKAPLERAAAKGSRDLAQRLVRVGAQTGYALHAAVRRGHVDIVSDLVDSGASLVAKDTLG 71
            T  +WA  LK PLE A   G RDLA  LVR GA+ G A++ A+  G  +++S L+D+GAS+ A D  G
Sbjct:   25 TPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEG 92
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9495.18477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE2.510e-1666.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL12_ECTSI6.670e-1454.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYD0_ECTSI1.070e-747.06Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 37..66
e-value: 8.7
score: 15.3
coord: 70..99
e-value: 0.0044
score: 26.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 70..102
score: 13.357
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 37..69
score: 10.526
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..102
e-value: 3.3E-21
score: 77.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 15..101
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 16..101
e-value: 4.5E-13
score: 49.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 37..102
score: 22.357
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 41..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9495contigL-elsbetiae_contig9495:3948..4253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9495.18477.1mRNA_L-elsbetiae_contig9495.18477.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9495 3948..4254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9495.18477.1 ID=prot_L-elsbetiae_contig9495.18477.1|Name=mRNA_L-elsbetiae_contig9495.18477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
EVLTSGQWAELLKAPLERAAAKGSRDLAQRLVRVGAQTGYALHAAVRRGH
VDIVSDLVDSGASLVAKDTLGGTALHIAAQRGKTEMVQLMLLKGADKDAF
DR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom