prot_L-elsbetiae_contig9413.18408.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9413.18408.1
Unique Nameprot_L-elsbetiae_contig9413.18408.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length190
Homology
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: D8LN36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN36_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 3.810e-79
Identity = 121/153 (79.08%), Postives = 134/153 (87.58%), Query Frame = 0
Query:   15 ANTAITLATFTAGFAGSVYTSCSDDNN-CTADDWFFVVKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEMEEVA-RLRAALP 165
            ANTAITLATF  G+AGS+YT CSDD++ CT +DW FV+KLG L+A LL  FFV TQCTRFAVHFSFCINTRE+EGVPM   +LVNVFEHSH+YFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVK EM+++  R RA LP
Sbjct:   78 ANTAITLATFAVGYAGSIYTDCSDDDDDCTPEDWLFVIKLGCLSAVLLVNFFVLTQCTRFAVHFSFCINTREIEGVPMSHAMLVNVFEHSHKYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKDEMDQMTGRKRATLP 230          
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: A0A6H5JMS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS3_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 5.310e-77
Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 0
Query:   15 ANTAITLATFTAGFAGSVYTSCSD-DNNCTADDWFFVVKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEMEEVARLRAALP 165
            ANTAI L TF  G+AGS+YT CSD D +C+ADDW FV+KLG LAA L+TIFFVFTQCTR+AVHFSFCINT+++ G PM Q ++V VF H+HQY+SLGIRL+FGTIPVFAWIFT WALLAVTPVY YMVRGLENAGFV+ E++E+AR++AALP
Sbjct:   72 ANTAILLTTFVVGYAGSIYTDCSDGDKSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTKKIAGAPMPQSLMVKVFNHAHQYYSLGIRLFFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEIARVKAALP 223          
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: D8LN41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN41_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.740e-75
Identity = 111/146 (76.03%), Postives = 128/146 (87.67%), Query Frame = 0
Query:   15 ANTAITLATFTAGFAGSVYTSCSD-DNNCTADDWFFVVKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEMEEVAR 159
            ANTAI LATF  G+AGS+YT CSD D +C+ADDW FV+KLG LAA L+TIFFVFTQCTR+AVHFSFCINTR++ G PM Q ++V VF H+HQY+SLGIRLYFGTIPVFAWIFT WALLAVTPVY YMVRGLENAGFV+ E++E+AR
Sbjct:   80 ANTAILLATFVVGYAGSIYTDCSDGDTSCSADDWLFVIKLGVLAALLMTIFFVFTQCTRYAVHFSFCINTRKIAGAPMPQSLMVKVFNHAHQYYSLGIRLYFGTIPVFAWIFTSWALLAVTPVYAYMVRGLENAGFVQDELDEIAR 225          
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: A0A835Z3S4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.950e-48
Identity = 74/140 (52.86%), Postives = 107/140 (76.43%), Query Frame = 0
Query:   16 NTAITLATFTAGFAGSVYTSCSD-DNNCTADDWFFVVKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEM 154
            NTAI +A F AGFA + Y +CSD +  CT++D   ++K+G + A +L+IFF+FTQC+RF +HFSF INTR++ GVP+ + +   VF H+H Y+ +GIR+YF TIPVFAW+FT W LLAVTP+Y+Y++ GLE++ F+  E+
Sbjct:   71 NTAILIANFAAGFAATRYATCSDAEGGCTSNDIQLMIKIGCIVALMLSIFFLFTQCSRFIIHFSFMINTRDVNGVPLPKELTNRVFNHAHDYYGIGIRMYFMTIPVFAWVFTEWCLLAVTPIYLYIIHGLESSSFMTKEL 210          
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: A0A835ZEB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.100e-39
Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 0
Query:   19 ITLATFTAGFAGSVYTSCSDDNN-CTADDWFFVVKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEMEEV 157
            I +A F AG A   +  C++    CT  +   +VKLG L   + TIFF+FTQC RFA+HFSF INTRE+  VP+   ++  VF+H+H Y+S+GIR +F TIPV +W+FT W LL VTPVY+ +V G+E++ F+   + E+
Sbjct:   71 IIIAIFVAGVASGHFADCANSGTGCTQAEVLVLVKLGTLVGLMCTIFFLFTQCARFAIHFSFMINTREMNSVPLPPSLMTRVFDHAHWYYSVGIRAFFVTIPVVSWLFTSWCLLGVTPVYLLVVHGIESSAFMSEPLLEL 210          
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Match: A0A7S3Y5F8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F8_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 5.380e-11
Identity = 28/61 (45.90%), Postives = 45/61 (73.77%), Query Frame = 0
Query:   96 LVNVFEHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFVKAEMEE 156
            +V VFE +H Y+S+GIRLYF  +P+FAW+F+ WALL  T +++ ++  LE A F++  ++E
Sbjct:    1 MVKVFERAHMYYSIGIRLYFLAVPLFAWLFSRWALLGATVIHLTIIYELERAQFLQDLVKE 61          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9413.18408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LN36_ECTSI3.810e-7979.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMS3_9PHAE5.310e-7773.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN41_ECTSI2.740e-7576.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3S4_9STRA2.950e-4852.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEB1_9STRA9.100e-3947.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y5F8_HETAK5.380e-1145.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006747Protein of unknown function DUF599PFAMPF04654DUF599coord: 15..143
e-value: 3.0E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR31881FAMILY NOT NAMEDcoord: 15..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..112
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9413contigL-elsbetiae_contig9413:3177..7508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9413.18408.1mRNA_L-elsbetiae_contig9413.18408.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9413 1374..7508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9413.18408.1 ID=prot_L-elsbetiae_contig9413.18408.1|Name=mRNA_L-elsbetiae_contig9413.18408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp
SSAACCDTKLNARQANTAITLATFTAGFAGSVYTSCSDDNNCTADDWFFV
VKLGALAATLLTIFFVFTQCTRFAVHFSFCINTRELEGVPMCQGILVNVF
EHSHQYFSLGIRLYFGTIPVFAWIFTPWALLAVTPVYVYMVRGLENAGFV
KAEMEEVARLRAALPPPPQGSSAAAAAGDAFEPGADKRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006747DUF599