prot_L-elsbetiae_contig9377.18373.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9377.18373.1
Unique Nameprot_L-elsbetiae_contig9377.18373.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length401
Homology
BLAST of mRNA_L-elsbetiae_contig9377.18373.1 vs. uniprot
Match: D8LTR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR8_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 9.710e-21
Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 0
Query:  288 CFQGCEATSKDGTWGRVCDPSCATGNPYGTHGCNTKWGYYGPDCRQCFNDLNLALAHDDHASDKRAIICDTMEPPTVYGAPVNSHRRGLQDGREDHVASNLHKLKTNFLNE 398
            CF GC  TS+DGT GRVCD SC TG PYGT+GC  K   YG  CR+C+ND+  AL  D    + RAI+CDT+EPP+ Y A     RR  +   E   A+ L +L   ++++
Sbjct:  566 CFDGCTYTSRDGTKGRVCDLSCKTGEPYGTYGCAAKSRKYGLSCRRCYNDVAKALKKD--TPENRAIMCDTLEPPSTYSA-----RRLEESNSEPSPAAELARLLQKYMHK 669          
BLAST of mRNA_L-elsbetiae_contig9377.18373.1 vs. uniprot
Match: A0A6H5L353_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L353_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 5.590e-20
Identity = 51/109 (46.79%), Postives = 65/109 (59.63%), Query Frame = 0
Query:  288 CFQGCEATSKDGTWGRVCDPSCATGNPYGTHGCNTKWGYYGPDCRQCFNDLNLALAHDDHASDKRAIICDTMEPPTVYGAPVNSHRRGLQDGREDHVASNLHKLKTNFL 396
            CF GC  TS DGT GRVCD SC TG PYGT+GC  K   YG  CR+C+ND+  AL  D    + RAI+CDT+EPP+ Y A     RR  +   +   A+ L +L   ++
Sbjct:  284 CFDGCTYTSHDGTRGRVCDLSCKTGEPYGTYGCAAKSRKYGLSCRRCYNDVAKALKKD--TPEHRAIMCDTLEPPSTYSA-----RRLEESDSKPSPAAELARLLQKYM 385          
BLAST of mRNA_L-elsbetiae_contig9377.18373.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 6.320e-18
Identity = 114/384 (29.69%), Postives = 163/384 (42.45%), Query Frame = 0
Query:   27 HRLAIVVPIAIYDLEMAIDSLSSWP--CGGFPGVDLLLL------HDDEAAAVGAEGTLGATVNTLGDGGCFGEIAAIFSDLDKEESVDPSTSRSAIFYKMFEDFPGNNVRPQLEEYAAIAVVDWERAVAASVSSFGQLHREAFISTFSSCSGENFWVKGG----------------RDARGVVDGGAAIYNNRDPAFVTFLAHARAVSGLATSHEVAMGRAASSFRDGGCF---ASDKFVRSDLISESG--------------DDTPFVRVSSTA-------STAATADVVAPVKSTKRRRLYKQDVRCFQGCEATSKD------GTWGRVCDPSCATGNPYGTHGCNTKWGY-----YGPDCRQCFNDLNLALAHDDHASDK 351
             RLA+VVP    DL  A+ SL++WP  C     V+  L+       DD+ AAV     L A   T   G CF     + ++L +EE+V P    S  FYK++ D   +NVR QL EY A+A+++W+  + A  +SF +L+  AF         E FW+KG                 R   G ++G A IYNN DPAFV F+ +         S++VA+    S F          S KFV  DLI+  G               +T F+  S T        ++ A AD    ++   + R  +   RC   C   +        G    VCD SC +G   G        G      YG  CR CF D+  A A ++  +++
Sbjct:  122 RRLAVVVPAHAGDLGKALTSLATWPTTCHSSTLVNAHLILYYAGGEDDDVAAV-----LPALAQT--GGRCFANTRLVLANLSQEENVYPK-GPSVQFYKLYLD---SNVRRQLIEYDALAIIEWD-VIVAHDTSFEKLYAAAFGGV------EPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNA-IYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGE---RCTASCGGGAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEE 483          
BLAST of mRNA_L-elsbetiae_contig9377.18373.1 vs. uniprot
Match: A0A6H5JGJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.400e-16
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0
Query:  271 APVKSTKRR-RLYKQDVRCFQGCEATSKDGTWGRVCDPSCATGNPYGTHGCNTKWGYYGPDCRQCFNDLNLALAHDDHASDKRAIICDTMEPPTVYGAPVNSHR----------RGLQDGR 380
            AP   T+R+ + +     C   CE TS DG  GRVCD +C  G+PYG  GC+ K G +GP CR CFND+++AL  D   +  RAI+C TM P     +P +             RG++ GR
Sbjct:  185 APKWQTERKWKRFDYGFDCMDKCEHTSNDGIRGRVCDSTCEDGHPYGNLGCSAKGGRFGPHCRTCFNDVDMALMRDTPKN--RAIMCSTMLPVGARTSPESDRAAPKKYDAHAARGVKQGR 303          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9377.18373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTR8_ECTSI9.710e-2146.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L353_9PHAE5.590e-2046.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZV7_9PHAE6.320e-1829.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JGJ2_9PHAE7.400e-1639.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..400
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9377contigL-elsbetiae_contig9377:2101..5302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9377.18373.1mRNA_L-elsbetiae_contig9377.18373.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9377 2018..6117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9377.18373.1 ID=prot_L-elsbetiae_contig9377.18373.1|Name=mRNA_L-elsbetiae_contig9377.18373.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=401bp
MLSMTHVRIVLATLCLLPTSAAAAHDHRLAIVVPIAIYDLEMAIDSLSSW
PCGGFPGVDLLLLHDDEAAAVGAEGTLGATVNTLGDGGCFGEIAAIFSDL
DKEESVDPSTSRSAIFYKMFEDFPGNNVRPQLEEYAAIAVVDWERAVAAS
VSSFGQLHREAFISTFSSCSGENFWVKGGRDARGVVDGGAAIYNNRDPAF
VTFLAHARAVSGLATSHEVAMGRAASSFRDGGCFASDKFVRSDLISESGD
DTPFVRVSSTASTAATADVVAPVKSTKRRRLYKQDVRCFQGCEATSKDGT
WGRVCDPSCATGNPYGTHGCNTKWGYYGPDCRQCFNDLNLALAHDDHASD
KRAIICDTMEPPTVYGAPVNSHRRGLQDGREDHVASNLHKLKTNFLNENT
*
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