prot_L-elsbetiae_contig937.18370.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig937.18370.1
Unique Name	prot_L-elsbetiae_contig937.18370.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	524

Homology

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BLAST of mRNA_L-elsbetiae_contig937.18370.1 vs. uniprot
Match: D7FQ28_ECTSI (Similar to calcyphosine-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ28_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 3.300e-214
Identity = 349/535 (65.23%), Postives = 406/535 (75.89%), Query Frame = 0

Query:    1 MILRTRRCSIPMFGLGRVSLDLFHWGVNWRRIDAVHYHIARSVFIRQHGRSANFDFARYACLVTDRQILGMANISLSSWLALLVFRWVWYSFQKAFASDVDTVSYEAWFVFGVVLCLLELSLLFVCTLGVRRVCIKLGADPKDPIKTMDAVLERIWVAPLTHMQHAASMHVISPGEMTAINENCPYEAPGDATGVAATAARSSFAGKPGTKAGAAAIHGSEGGGGLQSG--GVAGDAGAWAAEGLRMETKGDGIPNITMRDAFLLGSGKAYGRAVDILMLLNSYYLAFFTVYFISRATKSSTEWVWIIVLPLPILYGVLMAYRRVLPLIALLSTIVMVQATDVADVEQEAEELNRIRRKVVMRVEDVLEQEFKASQACAKKDVMCLEAQSSAAYILKRWDEDDNGSLSYKELEKGLQEIGLVLSSKQRRELLRLADPDRSGSVDIKELTELFYDVEVEMAAAAAVKDEATGRRGSVSGGAMRHTFSDDGRPALGVNVNVGKFRTG----------GNANERVERLLWRRASEKWT 523
            MI RT + SIPMFGLGRVSLD+FHWG NW+ IDAV YH+ARSVFIRQH ++ANFDFARYACLVTDRQILGMAN+SL+SWLALLVFRWV Y  Q   + D  TVS+ AWFVFG+VLCLLELSLLF C LGVRRVCIKLGADP+DP+KT+DAVLERIWVAP+TH+QHAASMH I     +A+ E    + PG++  V A  A              A +HGSEGGGGL++G   +      +A E   M  +G  IP ITMRDAF+L  GKAY +AV+ILMLLNSYYLAF+ VYFISRA+KS TEWVWIIVLPLPIL GVLMAYRRVLPLIALLSTIVM+Q TDVADVEQEAEELN++RRK+VMRVEDVLEQEFKA   CA+      + Q+SAA++LKRWDEDDNG+LS++EL KGL+EIGL+LSSKQRREL+RLADPDRSG VDIKEL EL YDVEVE+AA  +V+ E   +  + + G M  T S        +N  VG  RTG          G  N+RVERLL +RASEKW+
Sbjct:   76 MIARTHKWSIPMFGLGRVSLDVFHWGSNWKWIDAVQYHLARSVFIRQHRQNANFDFARYACLVTDRQILGMANVSLASWLALLVFRWVSYGLQVGLSRDGGTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIG---RSALGEGATSDTPGNSCAVDADQA--------------AMVHGSEGGGGLEAGRSAIRSTMPDFAEE---MPMRGANIPEITMRDAFVLPIGKAYKQAVEILMLLNSYYLAFYAVYFISRASKSETEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKA---CAESGETRADGQTSAAFLLKRWDEDDNGNLSHQELHKGLEEIGLLLSSKQRRELIRLADPDRSGGVDIKELAELLYDVEVEIAAGRSVEGEE--QAAAAAPGRMGLTTS--------LNTKVGFRRTGSGLRPNGLSDGGVNDRVERLLRKRASEKWS 577

[Close]

BLAST of mRNA_L-elsbetiae_contig937.18370.1 vs. uniprot
Match: A0A6H5JCN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN8_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 2.650e-159
Identity = 259/381 (67.98%), Postives = 300/381 (78.74%), Query Frame = 0

Query:    1 MILRTRRCSIPMFGLGRVSLDLFHWGVNWRRIDAVHYHIARSVFIRQHGRSANFDFARYACLVTDRQILGMANISLSSWLALLVFRWVWYSFQKAFASDVDTVSYEAWFVFGVVLCLLELSLLFVCTLGVRRVCIKLGADPKDPIKTMDAVLERIWVAPLTHMQHAASMH-VISPGEMTAINENCPYEAPGDATGVAATAARSSFAGKPGTKAGAAAIHGSEGGGGLQSGGVAGDAGAWAAEGLRMETKGDGIPNITMRDAFLLGSGKAYGRAVDILMLLNSYYLAFFTVYFISRATKSSTEWVWIIVLPLPILYGVLMAYRRVLPLIALLSTIVMVQATDVADVEQEAEELNRIRRKVVMRVEDVLEQEFKASQACAKKD 380
            MI RT + SIPMFGLGRVSLD+FHWG NW+  DAV YH+ARSVFIRQH ++ANFDFARYAC+VTDRQILGMAN+SL SWLALLVFRWV Y  Q   + D  TVS+ AWFVFG+VLCLLELSLLF C LGVRRVCIKLGADP+DP+KT+DAVLERIWVAP+TH+QHAASMH ++ P    A++E    + P ++  V A  A              A +HGSEG GGL++GG A  +       + M  +G  IP ITMRDAF+L  GKAY +A++ILMLLNSYYLAF+ VYFISRA+KS TEWVWIIVLPLPIL GVLMAYRRVLPLIALLSTIVM+Q TDVADVEQEAEELN++RRK+VMRVEDVLEQEFKAS    ++D
Sbjct:  201 MIARTHKWSIPMFGLGRVSLDVFHWGSNWKWTDAVQYHLARSVFIRQHRQNANFDFARYACMVTDRQILGMANVSLVSWLALLVFRWVSYGLQVGLSRDGGTVSFRAWFVFGIVLCLLELSLLFACMLGVRRVCIKLGADPQDPVKTVDAVLERIWVAPMTHVQHAASMHGIVRP----ALDEGATADTPRNSCAVDADQA--------------AVVHGSEGSGGLEAGGSAVRS-TMPDFAVEMPVRGANIPEITMRDAFVLPIGKAYKQAIEILMLLNSYYLAFYAVYFISRASKSDTEWVWIIVLPLPILAGVLMAYRRVLPLIALLSTIVMMQPTDVADVEQEAEELNKLRRKLVMRVEDVLEQEFKASLRRERRD 562

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig937.18370.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig937.18370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQ28_ECTSI	3.300e-214	65.23	Similar to calcyphosine-like protein n=1 Tax=Ectoc...	[more]
A0A6H5JCN8_9PHAE	2.650e-159	67.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 341..361
None	No IPR available	GENE3D	1.10.238.10		coord: 333..461 e-value: 3.2E-11 score: 45.5
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 89..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 302..320
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 275..296
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..67
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 131..274
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 108..130
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 321..523
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 297..301
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 68..88
None	No IPR available	TMHMM	TMhelix		coord: 105..127
None	No IPR available	TMHMM	TMhelix		coord: 302..324
None	No IPR available	TMHMM	TMhelix		coord: 68..90
None	No IPR available	TMHMM	TMhelix		coord: 275..292
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 398..410
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 434..446
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 385..420 score: 9.743
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 421..456 score: 9.715
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 393..455

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig937	contig	L-elsbetiae_contig937:14806..18913 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig937.18370.1	mRNA_L-elsbetiae_contig937.18370.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig937 13697..20137 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig937.18370.1 ID=prot_L-elsbetiae_contig937.18370.1|Name=mRNA_L-elsbetiae_contig937.18370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=524bp
MILRTRRCSIPMFGLGRVSLDLFHWGVNWRRIDAVHYHIARSVFIRQHGR
SANFDFARYACLVTDRQILGMANISLSSWLALLVFRWVWYSFQKAFASDV
DTVSYEAWFVFGVVLCLLELSLLFVCTLGVRRVCIKLGADPKDPIKTMDA
VLERIWVAPLTHMQHAASMHVISPGEMTAINENCPYEAPGDATGVAATAA
RSSFAGKPGTKAGAAAIHGSEGGGGLQSGGVAGDAGAWAAEGLRMETKGD
GIPNITMRDAFLLGSGKAYGRAVDILMLLNSYYLAFFTVYFISRATKSST
EWVWIIVLPLPILYGVLMAYRRVLPLIALLSTIVMVQATDVADVEQEAEE
LNRIRRKVVMRVEDVLEQEFKASQACAKKDVMCLEAQSSAAYILKRWDED
DNGSLSYKELEKGLQEIGLVLSSKQRRELLRLADPDRSGSVDIKELTELF
YDVEVEMAAAAAVKDEATGRRGSVSGGAMRHTFSDDGRPALGVNVNVGKF
RTGGNANERVERLLWRRASEKWT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair