prot_L-elsbetiae_contig9361.18358.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9361.18358.1
Unique Nameprot_L-elsbetiae_contig9361.18358.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length250
Homology
BLAST of mRNA_L-elsbetiae_contig9361.18358.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 4.800e-69
Identity = 162/224 (72.32%), Postives = 171/224 (76.34%), Query Frame = 0
Query:    4 QRGYAAAQAGG-GQRLSMVTPQRAGRIGAGXXXXXXXXXXGVDRRLAPSPPGEGSRKREEMAVAELLANSSRVLPEELDLRNAGKRPHSAPDGGXXXXAA--GLRITNPDDLLGGAASVGATAVAHTPWDGEVDNLPDGFPAAKVRMTPTEEISNDFAETYGNRSGGSGXXXXXXXXXXXXXXXX--AGPQAGGALHRNISQGQVAGALKLIANAKVFRDKKLA 222
            QR YAA  AG   QRLSMVTP R GR GAG          GVDRRLAPSPPGEGSRKREEMAVAELLANSSRV PE  D+RN GKRPHSAPD G  XX    GLRITNPD L    +  G TA+AHTPWDGEV+NLPDG PAAK RMTPTEE+SNDFA+TYG+  G   XXXX  XXXXXXXXXX  A PQAGGALHRNISQGQVAGAL+LIANAK  RD+ LA
Sbjct: 1011 QRHYAAQAAGERAQRLSMVTPVRGGRSGAGGGLG------GVDRRLAPSPPGEGSRKREEMAVAELLANSSRVHPE--DMRNNGKRPHSAPDAGGSXXXXXXGLRITNPDLL----SPSGNTAMAHTPWDGEVNNLPDGLPAAKGRMTPTEEVSNDFAQTYGSSGGXXXXXXXRVXXXXXXXXXXSSAAPQAGGALHRNISQGQVAGALRLIANAKAVRDRNLA 1222          
BLAST of mRNA_L-elsbetiae_contig9361.18358.1 vs. uniprot
Match: A0A6H5K5H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H7_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.130e-55
Identity = 142/202 (70.30%), Postives = 152/202 (75.25%), Query Frame = 0
Query:    7 YAAAQAGG--GQRLSMVTPQRAGRIGAGXXXXXXXXXXGVDRRLAPSPPGEGSRKREEMAVAELLANSSRVLPEELDLRNAGKRPHSAPDGGXXXXAAGLRITNPDDLLGGAASVGATAVAHTPWDGEVDNLPDGFPAAKVRMTPTEEISNDFAETYGN----RSGGSGXXXXXXXXXXXXXXXXAGPQAGGALHRNISQGQ 202
            YA+AQA G   QRLSMVTP R G      XXXXXXXXXGVDRRLAPSPPGEGSRKREEMAVAELLANSSRV P+  D+R  GKRPHSAP  G   X  GLRITNPD L    +  G TA+AHTPWDGEV+NLPDG PAAK RMTPT+E+SNDFA+TYG+          XXXXXXXXXXX     A PQAGGALHRNISQGQ
Sbjct:  534 YASAQAAGERAQRLSMVTPVRGGXXXX--XXXXXXXXXGVDRRLAPSPPGEGSRKREEMAVAELLANSSRVHPD--DMRYIGKRPHSAPGAGGSGXGGGLRITNPDLL----SPSGNTAMAHTPWDGEVNNLPDGLPAAKGRMTPTQEVSNDFAQTYGSGXXXXXXXXXXXXXXXXXXXXANGSSAAPQAGGALHRNISQGQ 727          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9361.18358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG60_ECTSI4.800e-6972.32Histone deactylase of possible bacterial origin wi... [more]
A0A6H5K5H7_9PHAE3.130e-5570.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9361contigL-elsbetiae_contig9361:1469..4752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9361.18358.1mRNA_L-elsbetiae_contig9361.18358.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9361 1469..4752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9361.18358.1 ID=prot_L-elsbetiae_contig9361.18358.1|Name=mRNA_L-elsbetiae_contig9361.18358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
MNQQRGYAAAQAGGGQRLSMVTPQRAGRIGAGGGGSGGGGDGGVDRRLAP
SPPGEGSRKREEMAVAELLANSSRVLPEELDLRNAGKRPHSAPDGGGGGG
AAGLRITNPDDLLGGAASVGATAVAHTPWDGEVDNLPDGFPAAKVRMTPT
EEISNDFAETYGNRSGGSGGGGSGGGGRSNGNASSAGPQAGGALHRNISQ
GQVAGALKLIANAKVFRDKKLADKAVAAGGAAGAGAPPAGSATAAPKPAT
back to top