prot_L-elsbetiae_contig9357.18352.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9357.18352.1
Unique Nameprot_L-elsbetiae_contig9357.18352.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length407
Homology
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BLAST of mRNA_L-elsbetiae_contig9357.18352.1 vs. uniprot
Match: D8LE89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE89_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 4.650e-98
Identity = 233/395 (58.99%), Postives = 259/395 (65.57%), Query Frame = 0 
Query:   14 WMDDMISKGFLRPRFLPPHAGGAPATRHVGSPIETIHTASAAEVVLGGSHPXXXXXXXAPAQQLVQETGSPGN-WLQGPLRECARNAGDDGVLARSLLDAGAATDAVDRAGRSPLHWACTRGNTAVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGFAPRGSPAPLAPXXXXXXXXXXXXXXXXXXXRRPDESGV-SIVDARNAYGSTALHRAAFNGRDGVVLALLTGGAGVSIVGNSGRSALHLACRNAHPACAGILLAWGADESARAKDGSTPWSELAQAAEIRPPGCPRVAETARLLNTARGSRAWGRRGWLLVLKDRHSRRVARQMAGAERGTEMMLEGEGGGEAGWGPGVTAAVSRGLVGRLLAVGEEGCFRLVVGFL 406
            W +DMISKGF++ R LP H GG PA  H GSPIE+I    AA           XXXXX      VQETG+    WLQ PLR+CARNA DDG LARSLLDAGA T+  D  GRSPLHWACTRGNTAV +AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  YGFAP G P    P                     P ++GV SIVDARN YGSTALHRAAFNGR+GVVLALL GGA V +VGNSGR                        ESA AKDGSTPWS+LA AAE RP GCPRVA+TA LLNTARG+RAW RRGWLL+L+D+H+R V    A       + L+G GG  +    G     +R LV +L+ +GEEGCFRLVVGFL
Sbjct:   13 WFNDMISKGFVKQRHLPQHTGGPPAAGHAGSPIESILNPDAANENRSPDSDQAXXXXXXXXXXQVQETGAASRTWLQSPLRDCARNADDDGALARSLLDAGAPTNFFDSTGRSPLHWACTRGNTAVVLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFYGFAPIGLPPGNVPASLVAPALEAEELSWPMAAPMPQQNGVESIVDARNVYGSTALHRAAFNGREGVVLALLRGGADVCVVGNSGRXXXXXXXXXXXXXXXXXXXXXXXXESAIAKDGSTPWSQLALAAETRPRGCPRVAKTALLLNTARGARAWARRGWLLMLRDKHNRGVFEAEA-------IDLDGRGGACSDMEDGQGEDFAR-LVNQLVGIGEEGCFRLVVGFL 399
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BLAST of mRNA_L-elsbetiae_contig9357.18352.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.150e-6
Identity = 47/129 (36.43%), Postives = 62/129 (48.06%), Query Frame = 0 
Query:  222 VDARNAYGSTALHRAAFNGRDGVVLALLTGGAGVSIVGNSGRSALHLACRNAHPACAGILLAWGADESARAKDGSTP------WSELAQAAEIRPPGCPRVAETARLLNTARGSRAWGRRGWLLVLKDR 344
             + R+    T L  AA+ G    +  LL  GA V   G   RSALH AC   H AC   LL  GADE+   +DG++P       SE  + AE        +     +L  A   RAW RRGWL++L++R
Sbjct:   62 TEVRDRNNDTPLLLAAWLGHATAIAKLLASGARVDADGIP-RSALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAED-------IVLIREMLRRAPADRAWRRRGWLVMLRNR 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9357.18352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE89_ECTSI4.650e-9858.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0H9_ECTSI1.150e-636.43Ankyrin repeat domain protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 277..291
score: 33.68
coord: 156..171
score: 44.95
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 228..257
e-value: 0.15
score: 21.1
coord: 122..152
e-value: 0.014
score: 24.5
coord: 155..184
e-value: 0.15
score: 21.1
coord: 261..290
e-value: 14.0
score: 14.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 261..293
score: 10.152
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..154
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 228..260
score: 10.446
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 155..177
score: 10.205
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 198..318
e-value: 4.5E-21
score: 77.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 74..184
e-value: 3.5E-23
score: 84.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 105..300
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 95..180
e-value: 6.5E-12
score: 45.9
coord: 223..288
e-value: 2.4E-7
score: 31.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 91..298
score: 38.011
NoneNo IPR availablePANTHERPTHR24178:SF9ANKYRIN REPEAT AND SOCS BOX PROTEIN 3coord: 222..306
coord: 92..298
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 222..306
coord: 92..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9357contigL-elsbetiae_contig9357:1666..5979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9357.18352.1mRNA_L-elsbetiae_contig9357.18352.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9357 1666..6118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9357.18352.1 ID=prot_L-elsbetiae_contig9357.18352.1|Name=mRNA_L-elsbetiae_contig9357.18352.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=407bp
MLDSTNRMEAASPWMDDMISKGFLRPRFLPPHAGGAPATRHVGSPIETIH
TASAAEVVLGGSHPPPPPPPPAPAQQLVQETGSPGNWLQGPLRECARNAG
DDGVLARSLLDAGAATDAVDRAGRSPLHWACTRGNTAVAVALLDAGADGL
ARDGAGKTPLHCAAQVGHTSIVQALLDSYGFAPRGSPAPLAPPPPPAAVV
ERAPAAAAAVVRRPDESGVSIVDARNAYGSTALHRAAFNGRDGVVLALLT
GGAGVSIVGNSGRSALHLACRNAHPACAGILLAWGADESARAKDGSTPWS
ELAQAAEIRPPGCPRVAETARLLNTARGSRAWGRRGWLLVLKDRHSRRVA
RQMAGAERGTEMMLEGEGGGEAGWGPGVTAAVSRGLVGRLLAVGEEGCFR
LVVGFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom